RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 RTEL1-TNFRSF6BF6WH68 1400 aa27.94■■■□□ 2.06
TRIM3-201ENST00000345851 KTN1Q86UP2 1357 aaKnown RBP27.93■■■□□ 2.06
TRIM3-201ENST00000345851 RALGAPBQ86X10 1494 aa27.91■■■□□ 2.06
TRIM3-201ENST00000345851 RGS3P49796 1198 aa27.9■■■□□ 2.06
TRIM3-201ENST00000345851 FAM161AQ3B820 660 aa27.9■■■□□ 2.06
TRIM3-201ENST00000345851 CC2D1BQ5T0F9 858 aaKnown RBP27.9■■■□□ 2.06
TRIM3-201ENST00000345851 C8orf34Q49A92 452 aa27.89■■■□□ 2.06
TRIM3-201ENST00000345851 MAGI2Q86UL8 1455 aa27.89■■■□□ 2.06
TRIM3-201ENST00000345851 KDM2BQ8NHM5 1336 aa27.88■■■□□ 2.05
TRIM3-201ENST00000345851 UHRF1BP1Q6BDS2 1440 aa27.87■■■□□ 2.05
TRIM3-201ENST00000345851 INO80Q9ULG1 1556 aaPredicted RBP27.87■■■□□ 2.05
TRIM3-201ENST00000345851 PARD3Q8TEW0 1356 aa27.86■■■□□ 2.05
TRIM3-201ENST00000345851 GGT6Q6P531 493 aa27.86■■■□□ 2.05
TRIM3-201ENST00000345851 A2MP01023 1474 aa27.86■■■□□ 2.05
TRIM3-201ENST00000345851 FAM43AQ8N2R8 423 aa27.85■■■□□ 2.05
TRIM3-201ENST00000345851 RSPH6AQ9H0K4 717 aa27.85■■■□□ 2.05
TRIM3-201ENST00000345851 CENPQQ7L2Z9 268 aaPredicted RBP27.84■■■□□ 2.05
TRIM3-201ENST00000345851 E9PCH4 1651 aa27.82■■■□□ 2.04
TRIM3-201ENST00000345851 KIDINS220Q9ULH0 1771 aa27.82■■■□□ 2.04
TRIM3-201ENST00000345851 ZNF518AQ6AHZ1 1483 aa27.8■■■□□ 2.04
TRIM3-201ENST00000345851 PRAG1Q86YV5 1406 aa27.8■■■□□ 2.04
TRIM3-201ENST00000345851 KANK1Q14678 1352 aa27.78■■■□□ 2.04
TRIM3-201ENST00000345851 ATP10AO60312 1499 aa27.77■■■□□ 2.04
TRIM3-201ENST00000345851 POGKQ9P215 609 aa27.77■■■□□ 2.04
TRIM3-201ENST00000345851 PER1O15534 1290 aaPredicted RBP27.76■■■□□ 2.03
TRIM3-201ENST00000345851 CFAP65Q6ZU64 1925 aaKnown RBP27.76■■■□□ 2.03
TRIM3-201ENST00000345851 FAM69CQ0P6D2 419 aa27.75■■■□□ 2.03
TRIM3-201ENST00000345851 POGZQ7Z3K3 1410 aa27.75■■■□□ 2.03
TRIM3-201ENST00000345851 RIMBP3CA6NJZ7 1639 aa27.74■■■□□ 2.03
TRIM3-201ENST00000345851 RIMBP3BA6NNM3 1639 aa27.74■■■□□ 2.03
TRIM3-201ENST00000345851 RIMBP3Q9UFD9 1639 aa27.74■■■□□ 2.03
TRIM3-201ENST00000345851 BLMP54132 1417 aaPredicted RBP27.73■■■□□ 2.03
TRIM3-201ENST00000345851 UGGT1Q9NYU2 1555 aa27.73■■■□□ 2.03
TRIM3-201ENST00000345851 CHGAP10645 457 aaKnown RBP27.7■■■□□ 2.02
TRIM3-201ENST00000345851 ARXQ96QS3 562 aa27.7■■■□□ 2.02
TRIM3-201ENST00000345851 ADAMTS8Q9UP79 889 aa27.7■■■□□ 2.02
TRIM3-201ENST00000345851 DEPDC5O75140 1603 aa27.7■■■□□ 2.02
TRIM3-201ENST00000345851 MROH1Q8NDA8 1641 aa27.69■■■□□ 2.02
TRIM3-201ENST00000345851 TRPM1Q7Z4N2 1603 aa27.68■■■□□ 2.02
TRIM3-201ENST00000345851 SLKQ9H2G2 1235 aaPredicted RBP27.67■■■□□ 2.02
TRIM3-201ENST00000345851 RRAGDQ9NQL2 400 aaPredicted RBP27.67■■■□□ 2.02
TRIM3-201ENST00000345851 PANK3Q9H999 370 aa27.67■■■□□ 2.02
TRIM3-201ENST00000345851 CLTCL1P53675 1640 aa27.66■■■□□ 2.02
TRIM3-201ENST00000345851 ZMYM4Q5VZL5 1548 aa27.66■■■□□ 2.02
TRIM3-201ENST00000345851 DUSP27Q5VZP5 1158 aa27.65■■■□□ 2.02
TRIM3-201ENST00000345851 SPHKAPQ2M3C7 1700 aa27.64■■■□□ 2.02
TRIM3-201ENST00000345851 SENP3Q9H4L4 574 aaPredicted RBP27.64■■■□□ 2.02
TRIM3-201ENST00000345851 TET3O43151 1660 aa27.64■■■□□ 2.01
TRIM3-201ENST00000345851 PLEKHH1Q9ULM0 1364 aa27.63■■■□□ 2.01
TRIM3-201ENST00000345851 PTPRTO14522 1441 aa27.63■■■□□ 2.01
TRIM3-201ENST00000345851 TRPM2O94759 1503 aa27.62■■■□□ 2.01
TRIM3-201ENST00000345851 FRMPD1Q5SYB0 1578 aa27.62■■■□□ 2.01
TRIM3-201ENST00000345851 PRDM15P57071 1507 aaPredicted RBP27.62■■■□□ 2.01
TRIM3-201ENST00000345851 VWDEQ8N2E2 1590 aa27.61■■■□□ 2.01
TRIM3-201ENST00000345851 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.61■■■□□ 2.01
TRIM3-201ENST00000345851 CEP152O94986 1710 aa27.61■■■□□ 2.01
TRIM3-201ENST00000345851 TSPOAP1O95153 1857 aa27.61■■■□□ 2.01
TRIM3-201ENST00000345851 HECW2Q9P2P5 1572 aa27.6■■■□□ 2.01
TRIM3-201ENST00000345851 MLH3Q9UHC1 1453 aa27.6■■■□□ 2.01
TRIM3-201ENST00000345851 ABCA6Q8N139 1617 aa27.6■■■□□ 2.01
TRIM3-201ENST00000345851 CFAP74Q9C0B2 1584 aa27.59■■■□□ 2.01
TRIM3-201ENST00000345851 DISP3Q9P2K9 1392 aa27.59■■■□□ 2.01
TRIM3-201ENST00000345851 YEATS2Q9ULM3 1422 aa27.59■■■□□ 2.01
TRIM3-201ENST00000345851 SEC24BO95487 1268 aa27.57■■■□□ 2
TRIM3-201ENST00000345851 EIF2AK4Q9P2K8 1649 aaKnown RBP27.57■■■□□ 2
TRIM3-201ENST00000345851 USP19O94966 1318 aa27.57■■■□□ 2
TRIM3-201ENST00000345851 NEO1Q92859 1461 aa27.57■■■□□ 2
TRIM3-201ENST00000345851 PPRC1Q5VV67 1664 aaKnown RBP27.57■■■□□ 2
TRIM3-201ENST00000345851 GOLGA2Q08379 1002 aa27.56■■■□□ 2
TRIM3-201ENST00000345851 WDR43Q15061 677 aaKnown RBP eCLIP27.56■■■□□ 2
TRIM3-201ENST00000345851 NUTM2DQ5VT03 806 aaPredicted RBP27.56■■■□□ 2
TRIM3-201ENST00000345851 TESK2Q96S53 571 aa27.55■■■□□ 2
TRIM3-201ENST00000345851 ADGRF5Q8IZF2 1346 aa27.54■■■□□ 2
TRIM3-201ENST00000345851 CFAP70Q5T0N1 1121 aa27.54■■■□□ 2
TRIM3-201ENST00000345851 GPRASP1Q5JY77 1395 aa27.54■■■□□ 2
TRIM3-201ENST00000345851 INSRP06213 1382 aa27.53■■■□□ 2
TRIM3-201ENST00000345851 EFCAB6Q5THR3 1501 aa27.52■■■□□ 2
TRIM3-201ENST00000345851 NPATQ14207 1427 aa27.52■■■□□ 2
TRIM3-201ENST00000345851 IGHDP01880 384 aa27.51■■□□□ 1.99
TRIM3-201ENST00000345851 MAP3K4Q9Y6R4 1608 aa27.51■■□□□ 1.99
TRIM3-201ENST00000345851 BCAR3O75815 825 aa27.5■■□□□ 1.99
TRIM3-201ENST00000345851 BECN1Q14457 450 aa27.5■■□□□ 1.99
TRIM3-201ENST00000345851 L1TD1Q5T7N2 865 aaKnown RBP27.5■■□□□ 1.99
TRIM3-201ENST00000345851 COL17A1Q9UMD9 1497 aaPredicted RBP27.49■■□□□ 1.99
TRIM3-201ENST00000345851 CCDC146Q8IYE0 955 aa27.48■■□□□ 1.99
TRIM3-201ENST00000345851 NAP1L5Q96NT1 182 aaPredicted RBP27.48■■□□□ 1.99
TRIM3-201ENST00000345851 MADDQ8WXG6 1647 aa27.47■■□□□ 1.99
TRIM3-201ENST00000345851 PKNOX2Q96KN3 472 aa27.46■■□□□ 1.99
TRIM3-201ENST00000345851 DIP2CQ9Y2E4 1556 aa27.46■■□□□ 1.99
TRIM3-201ENST00000345851 SPINK5Q9NQ38 1064 aaPredicted RBP27.46■■□□□ 1.99
TRIM3-201ENST00000345851 RICTORQ6R327 1708 aa27.46■■□□□ 1.99
TRIM3-201ENST00000345851 ZNF521Q96K83 1311 aa27.45■■□□□ 1.99
TRIM3-201ENST00000345851 SLFN5Q08AF3 891 aa27.45■■□□□ 1.99
TRIM3-201ENST00000345851 RNF17Q9BXT8 1623 aaKnown RBP27.45■■□□□ 1.98
TRIM3-201ENST00000345851 PPP2R1AP30153 589 aa27.44■■□□□ 1.98
TRIM3-201ENST00000345851 GZF1Q9H116 711 aaPredicted RBP27.44■■□□□ 1.98
TRIM3-201ENST00000345851 TMF1P82094 1093 aa27.43■■□□□ 1.98
TRIM3-201ENST00000345851 SPRYD3Q8NCJ5 442 aa27.43■■□□□ 1.98
TRIM3-201ENST00000345851 DIP2BQ9P265 1576 aa27.43■■□□□ 1.98
TRIM3-201ENST00000345851 MLECQ14165 292 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms