RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 CHD2O14647 1828 aaKnown RBP29.82■■■□□ 2.36
CLTA-202ENST00000345519 DIP2AQ14689 1571 aa29.81■■■□□ 2.36
CLTA-202ENST00000345519 SETD5Q9C0A6 1442 aa29.8■■■□□ 2.36
CLTA-202ENST00000345519 ACIN1Q9UKV3 1341 aaKnown RBP29.8■■■□□ 2.36
CLTA-202ENST00000345519 PLEKHG1Q9ULL1 1385 aa29.78■■■□□ 2.36
CLTA-202ENST00000345519 NRXN3Q9Y4C0 1643 aa29.78■■■□□ 2.36
CLTA-202ENST00000345519 NEXMIFQ5QGS0 1516 aa29.76■■■□□ 2.36
CLTA-202ENST00000345519 LRRC7Q96NW7 1537 aa29.75■■■□□ 2.35
CLTA-202ENST00000345519 PPLO60437 1756 aa29.75■■■□□ 2.35
CLTA-202ENST00000345519 SETBP1Q9Y6X0 1596 aa29.74■■■□□ 2.35
CLTA-202ENST00000345519 ALKQ9UM73 1620 aa29.72■■■□□ 2.35
CLTA-202ENST00000345519 IFT172Q9UG01 1749 aa29.72■■■□□ 2.35
CLTA-202ENST00000345519 TRIM52Q96A61 297 aa29.71■■■□□ 2.35
CLTA-202ENST00000345519 SLC4A1APQ9BWU0 796 aaKnown RBP29.71■■■□□ 2.35
CLTA-202ENST00000345519 NKTRP30414 1462 aaKnown RBP29.69■■■□□ 2.34
CLTA-202ENST00000345519 RAB3GAP2Q9H2M9 1393 aa29.69■■■□□ 2.34
CLTA-202ENST00000345519 ADAMTS13Q76LX8 1427 aa29.69■■■□□ 2.34
CLTA-202ENST00000345519 SETD1AO15047 1707 aaKnown RBP29.68■■■□□ 2.34
CLTA-202ENST00000345519 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.67■■■□□ 2.34
CLTA-202ENST00000345519 HDGFP51858 240 aaKnown RBP29.66■■■□□ 2.34
CLTA-202ENST00000345519 MPHOSPH9Q99550 1183 aa29.62■■■□□ 2.33
CLTA-202ENST00000345519 XRN1Q8IZH2 1706 aaKnown RBP29.62■■■□□ 2.33
CLTA-202ENST00000345519 CHGAP10645 457 aaKnown RBP29.6■■■□□ 2.33
CLTA-202ENST00000345519 PIK3R4Q99570 1358 aa29.6■■■□□ 2.33
CLTA-202ENST00000345519 HRCP23327 699 aa29.59■■■□□ 2.33
CLTA-202ENST00000345519 SPATA31E1Q6ZUB1 1445 aa29.57■■■□□ 2.32
CLTA-202ENST00000345519 SLC26A8Q96RN1 970 aa29.57■■■□□ 2.32
CLTA-202ENST00000345519 KCNA6P17658 529 aa29.56■■■□□ 2.32
CLTA-202ENST00000345519 TBX22Q9Y458 520 aa29.56■■■□□ 2.32
CLTA-202ENST00000345519 CCDC144AA2RUR9 1427 aa29.55■■■□□ 2.32
CLTA-202ENST00000345519 PPP1R15AO75807 674 aaPredicted RBP29.55■■■□□ 2.32
CLTA-202ENST00000345519 FOXD1Q16676 465 aa29.51■■■□□ 2.31
CLTA-202ENST00000345519 RPGRIP1LQ68CZ1 1315 aa29.49■■■□□ 2.31
CLTA-202ENST00000345519 PTPRUQ92729 1446 aa29.46■■■□□ 2.31
CLTA-202ENST00000345519 NCOA3Q9Y6Q9 1424 aa29.46■■■□□ 2.31
CLTA-202ENST00000345519 UBAP1LF5GYI3 381 aa29.46■■■□□ 2.31
CLTA-202ENST00000345519 ZNF326Q5BKZ1 582 aaKnown RBP29.46■■■□□ 2.31
CLTA-202ENST00000345519 NUTM2DQ5VT03 806 aaPredicted RBP29.46■■■□□ 2.31
CLTA-202ENST00000345519 TMEM94Q12767 1356 aa29.45■■■□□ 2.31
CLTA-202ENST00000345519 PRAG1Q86YV5 1406 aa29.45■■■□□ 2.3
CLTA-202ENST00000345519 TOM1O60784 492 aa29.42■■■□□ 2.3
CLTA-202ENST00000345519 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.41■■■□□ 2.3
CLTA-202ENST00000345519 ANKRD30BQ9BXX2 1392 aa29.4■■■□□ 2.3
CLTA-202ENST00000345519 BCANQ96GW7 911 aa29.4■■■□□ 2.3
CLTA-202ENST00000345519 VGFO15240 615 aaPredicted RBP29.38■■■□□ 2.29
CLTA-202ENST00000345519 METP08581 1390 aa29.38■■■□□ 2.29
CLTA-202ENST00000345519 LAMC1P11047 1609 aa29.38■■■□□ 2.29
CLTA-202ENST00000345519 MYOM2P54296 1465 aa29.37■■■□□ 2.29
CLTA-202ENST00000345519 NRXN1Q9ULB1 1477 aa29.37■■■□□ 2.29
CLTA-202ENST00000345519 KNDC1Q76NI1 1749 aa29.37■■■□□ 2.29
CLTA-202ENST00000345519 NALCNQ8IZF0 1738 aa29.35■■■□□ 2.29
CLTA-202ENST00000345519 PIK3C2GO75747 1445 aa29.34■■■□□ 2.29
CLTA-202ENST00000345519 ROBO1Q9Y6N7 1651 aa29.34■■■□□ 2.29
CLTA-202ENST00000345519 PROSER2Q86WR7 435 aaPredicted RBP29.33■■■□□ 2.29
CLTA-202ENST00000345519 PTCH1Q13635 1447 aa29.32■■■□□ 2.28
CLTA-202ENST00000345519 SENP3Q9H4L4 574 aaPredicted RBP29.31■■■□□ 2.28
CLTA-202ENST00000345519 ASXL1Q8IXJ9 1541 aa29.3■■■□□ 2.28
CLTA-202ENST00000345519 MSH6P52701 1360 aa29.29■■■□□ 2.28
CLTA-202ENST00000345519 DCCP43146 1447 aa29.28■■■□□ 2.28
CLTA-202ENST00000345519 AMOTL2Q9Y2J4 779 aa29.28■■■□□ 2.28
CLTA-202ENST00000345519 FAM135BQ49AJ0 1406 aa29.28■■■□□ 2.28
CLTA-202ENST00000345519 ADGRF5Q8IZF2 1346 aa29.24■■■□□ 2.27
CLTA-202ENST00000345519 TECPR2O15040 1411 aa29.23■■■□□ 2.27
CLTA-202ENST00000345519 PIP4K2BP78356 416 aa29.22■■■□□ 2.27
CLTA-202ENST00000345519 RBM33Q96EV2 1170 aaKnown RBP29.22■■■□□ 2.27
CLTA-202ENST00000345519 ADGRL3Q9HAR2 1447 aa29.2■■■□□ 2.27
CLTA-202ENST00000345519 RGL3Q3MIN7 710 aa29.2■■■□□ 2.26
CLTA-202ENST00000345519 HSPA1LP34931 641 aa29.17■■■□□ 2.26
CLTA-202ENST00000345519 C19orf44Q9H6X5 657 aa29.16■■■□□ 2.26
CLTA-202ENST00000345519 SCAF1Q9H7N4 1312 aaKnown RBP29.15■■■□□ 2.26
CLTA-202ENST00000345519 ROBO2Q9HCK4 1378 aa29.14■■■□□ 2.26
CLTA-202ENST00000345519 PHLPP1O60346 1717 aa29.14■■■□□ 2.26
CLTA-202ENST00000345519 AHDC1Q5TGY3 1603 aaPredicted RBP29.14■■■□□ 2.26
CLTA-202ENST00000345519 NHSL1Q5SYE7 1610 aa29.13■■■□□ 2.25
CLTA-202ENST00000345519 KIAA1210Q9ULL0 1709 aa29.13■■■□□ 2.25
CLTA-202ENST00000345519 ADGRB1O14514 1584 aa29.13■■■□□ 2.25
CLTA-202ENST00000345519 CDC42BPGQ6DT37 1551 aa29.13■■■□□ 2.25
CLTA-202ENST00000345519 COL16A1Q07092 1604 aaPredicted RBP29.12■■■□□ 2.25
CLTA-202ENST00000345519 LRPPRCP42704 1394 aaKnown RBP29.11■■■□□ 2.25
CLTA-202ENST00000345519 CADPS2Q86UW7 1296 aa29.1■■■□□ 2.25
CLTA-202ENST00000345519 DHX57Q6P158 1386 aaKnown RBP29.1■■■□□ 2.25
CLTA-202ENST00000345519 MST1RQ04912 1400 aa29.1■■■□□ 2.25
CLTA-202ENST00000345519 STAC3Q96MF2 364 aa29.09■■■□□ 2.25
CLTA-202ENST00000345519 SLAIN2Q9P270 581 aa29.09■■■□□ 2.25
CLTA-202ENST00000345519 ABCC11Q96J66 1382 aa29.09■■■□□ 2.25
CLTA-202ENST00000345519 MED1Q15648 1581 aaPredicted RBP29.08■■■□□ 2.25
CLTA-202ENST00000345519 YTHDC2Q9H6S0 1430 aaKnown RBP29.07■■■□□ 2.24
CLTA-202ENST00000345519 C14orf93Q9H972 538 aaKnown RBP29.07■■■□□ 2.24
CLTA-202ENST00000345519 DLC1Q96QB1 1528 aa29.06■■■□□ 2.24
CLTA-202ENST00000345519 FMN2Q9NZ56 1722 aa29.03■■■□□ 2.24
CLTA-202ENST00000345519 SHPRHQ149N8 1683 aa29.02■■■□□ 2.24
CLTA-202ENST00000345519 ARHGEF28Q8N1W1 1705 aaKnown RBP29.01■■■□□ 2.23
CLTA-202ENST00000345519 ATF3P18847 181 aa29.01■■■□□ 2.23
CLTA-202ENST00000345519 TRIM26Q12899 539 aaPredicted RBP29.01■■■□□ 2.23
CLTA-202ENST00000345519 C14orf37Q86TY3 774 aa29.01■■■□□ 2.23
CLTA-202ENST00000345519 ADGRB2O60241 1585 aa28.99■■■□□ 2.23
CLTA-202ENST00000345519 SIRT1Q96EB6 747 aa28.97■■■□□ 2.23
CLTA-202ENST00000345519 CFAP70Q5T0N1 1121 aa28.96■■■□□ 2.23
CLTA-202ENST00000345519 C1orf167Q5SNV9 1468 aa28.96■■■□□ 2.23
CLTA-202ENST00000345519 TMEM132EQ6IEE7 984 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms