RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 MAPK8IP3Q9UPT6 1336 aa17.42■□□□□ 0.38
SYDE1-201ENST00000342784 HNRNPMP52272 730 aaKnown RBP eCLIP17.42■□□□□ 0.38
SYDE1-201ENST00000342784 TCOF1Q13428 1488 aaKnown RBP17.42■□□□□ 0.38
SYDE1-201ENST00000342784 KIF14Q15058 1648 aa17.41■□□□□ 0.38
SYDE1-201ENST00000342784 PKD2Q13563 968 aa17.41■□□□□ 0.38
SYDE1-201ENST00000342784 GOLGA2Q08379 1002 aa17.41■□□□□ 0.38
SYDE1-201ENST00000342784 ANTXR1Q9H6X2 564 aa17.4■□□□□ 0.38
SYDE1-201ENST00000342784 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
SYDE1-201ENST00000342784 TBC1D2Q9BYX2 928 aa17.39■□□□□ 0.38
SYDE1-201ENST00000342784 PLCD3Q8N3E9 789 aa17.39■□□□□ 0.37
SYDE1-201ENST00000342784 BRD2P25440 801 aaKnown RBP17.39■□□□□ 0.37
SYDE1-201ENST00000342784 ABCC2Q92887 1545 aa17.38■□□□□ 0.37
SYDE1-201ENST00000342784 KIAA1211Q6ZU35 1233 aa17.38■□□□□ 0.37
SYDE1-201ENST00000342784 DUSP27Q5VZP5 1158 aa17.38■□□□□ 0.37
SYDE1-201ENST00000342784 CHMP5Q9NZZ3 219 aa17.38■□□□□ 0.37
SYDE1-201ENST00000342784 CENPJQ9HC77 1338 aaPredicted RBP17.37■□□□□ 0.37
SYDE1-201ENST00000342784 PLEKHH2Q8IVE3 1493 aa17.37■□□□□ 0.37
SYDE1-201ENST00000342784 ADAMTS8Q9UP79 889 aa17.37■□□□□ 0.37
SYDE1-201ENST00000342784 KDM5CP41229 1560 aa17.36■□□□□ 0.37
SYDE1-201ENST00000342784 ZHX1Q9UKY1 873 aaPredicted RBP17.36■□□□□ 0.37
SYDE1-201ENST00000342784 ERBB4Q15303 1308 aa17.35■□□□□ 0.37
SYDE1-201ENST00000342784 ANP32BQ92688 251 aaKnown RBP17.35■□□□□ 0.37
SYDE1-201ENST00000342784 ZFP91Q96JP5 570 aaPredicted RBP17.35■□□□□ 0.37
SYDE1-201ENST00000342784 DDX11L8A8MPP1 907 aa17.35■□□□□ 0.37
SYDE1-201ENST00000342784 IGHDP01880 384 aa17.35■□□□□ 0.37
SYDE1-201ENST00000342784 ROCK1Q13464 1354 aa17.34■□□□□ 0.37
SYDE1-201ENST00000342784 BLMP54132 1417 aaPredicted RBP17.34■□□□□ 0.37
SYDE1-201ENST00000342784 ISY1Q9ULR0 285 aaKnown RBP17.34■□□□□ 0.37
SYDE1-201ENST00000342784 TSPY4P0CV99 314 aa17.32■□□□□ 0.36
SYDE1-201ENST00000342784 TSPY10P0CW01 314 aa17.32■□□□□ 0.36
SYDE1-201ENST00000342784 GPATCH8Q9UKJ3 1502 aaKnown RBP17.32■□□□□ 0.36
SYDE1-201ENST00000342784 KIAA1107Q9UPP5 1409 aa17.32■□□□□ 0.36
SYDE1-201ENST00000342784 DAPK1P53355 1430 aa17.32■□□□□ 0.36
SYDE1-201ENST00000342784 MBD5Q9P267 1494 aa17.32■□□□□ 0.36
SYDE1-201ENST00000342784 TBC1D32Q96NH3 1257 aa17.32■□□□□ 0.36
SYDE1-201ENST00000342784 FAM13BQ9NYF5 915 aa17.31■□□□□ 0.36
SYDE1-201ENST00000342784 RALGAPBQ86X10 1494 aa17.31■□□□□ 0.36
SYDE1-201ENST00000342784 EIF3AQ14152 1382 aaKnown RBP17.31■□□□□ 0.36
SYDE1-201ENST00000342784 MSNP26038 577 aaKnown RBP17.31■□□□□ 0.36
SYDE1-201ENST00000342784 ZMYM4Q5VZL5 1548 aa17.3■□□□□ 0.36
SYDE1-201ENST00000342784 BCAR3O75815 825 aa17.3■□□□□ 0.36
SYDE1-201ENST00000342784 CGNL1Q0VF96 1302 aa17.3■□□□□ 0.36
SYDE1-201ENST00000342784 PANK3Q9H999 370 aa17.3■□□□□ 0.36
SYDE1-201ENST00000342784 ZCCHC11Q5TAX3 1644 aaKnown RBP17.29■□□□□ 0.36
SYDE1-201ENST00000342784 CLUAP1Q96AJ1 413 aa17.29■□□□□ 0.36
SYDE1-201ENST00000342784 HSCBQ8IWL3 235 aa17.28■□□□□ 0.36
SYDE1-201ENST00000342784 ARID3AQ99856 593 aa17.28■□□□□ 0.36
SYDE1-201ENST00000342784 INSRP06213 1382 aa17.28■□□□□ 0.36
SYDE1-201ENST00000342784 ADCY10Q96PN6 1610 aa17.28■□□□□ 0.36
SYDE1-201ENST00000342784 VGLL3A8MV65 326 aa17.28■□□□□ 0.36
SYDE1-201ENST00000342784 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
SYDE1-201ENST00000342784 COG6Q9Y2V7 657 aa17.28■□□□□ 0.36
SYDE1-201ENST00000342784 PLEKHH1Q9ULM0 1364 aa17.28■□□□□ 0.36
SYDE1-201ENST00000342784 ARHGAP5Q13017 1502 aa17.27■□□□□ 0.36
SYDE1-201ENST00000342784 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.27■□□□□ 0.36
SYDE1-201ENST00000342784 ZNF830Q96NB3 372 aaPredicted RBP17.27■□□□□ 0.36
SYDE1-201ENST00000342784 MAP7D2Q96T17 732 aa17.27■□□□□ 0.36
SYDE1-201ENST00000342784 CAMSAP2Q08AD1 1489 aa17.26■□□□□ 0.35
SYDE1-201ENST00000342784 ABCC5O15440 1437 aa17.26■□□□□ 0.35
SYDE1-201ENST00000342784 SLFN5Q08AF3 891 aa17.26■□□□□ 0.35
SYDE1-201ENST00000342784 PZPP20742 1482 aa17.25■□□□□ 0.35
SYDE1-201ENST00000342784 ASXL2Q76L83 1435 aa17.25■□□□□ 0.35
SYDE1-201ENST00000342784 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
SYDE1-201ENST00000342784 MFAP1P55081 439 aaKnown RBP17.25■□□□□ 0.35
SYDE1-201ENST00000342784 UHRF1BP1Q6BDS2 1440 aa17.24■□□□□ 0.35
SYDE1-201ENST00000342784 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
SYDE1-201ENST00000342784 ZSCAN30Q86W11 494 aa17.23■□□□□ 0.35
SYDE1-201ENST00000342784 FTSJ3Q8IY81 847 aaKnown RBP17.23■□□□□ 0.35
SYDE1-201ENST00000342784 CCDC146Q8IYE0 955 aa17.23■□□□□ 0.35
SYDE1-201ENST00000342784 PANK1Q8TE04 598 aa17.23■□□□□ 0.35
SYDE1-201ENST00000342784 PMFBP1Q8TBY8 1022 aa17.23■□□□□ 0.35
SYDE1-201ENST00000342784 GBP4Q96PP9 640 aa17.23■□□□□ 0.35
SYDE1-201ENST00000342784 R3HCC1Q9Y3T6 440 aaKnown RBP17.23■□□□□ 0.35
SYDE1-201ENST00000342784 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
SYDE1-201ENST00000342784 SECISBP2LQ93073 1101 aaKnown RBP17.22■□□□□ 0.35
SYDE1-201ENST00000342784 C22orf23Q9BZE7 217 aa17.22■□□□□ 0.35
SYDE1-201ENST00000342784 CCDC173Q0VFZ6 552 aa17.22■□□□□ 0.35
SYDE1-201ENST00000342784 AFAP1Q8N556 730 aa17.22■□□□□ 0.35
SYDE1-201ENST00000342784 TTC37Q6PGP7 1564 aa17.21■□□□□ 0.35
SYDE1-201ENST00000342784 ABCC10Q5T3U5 1492 aa17.21■□□□□ 0.35
SYDE1-201ENST00000342784 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.35
SYDE1-201ENST00000342784 OFD1O75665 1012 aa17.21■□□□□ 0.35
SYDE1-201ENST00000342784 PDE3AQ14432 1141 aa17.21■□□□□ 0.35
SYDE1-201ENST00000342784 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.21■□□□□ 0.34
SYDE1-201ENST00000342784 TMEM51Q9NW97 253 aa17.2■□□□□ 0.34
SYDE1-201ENST00000342784 UHRF1BP1LA0JNW5 1464 aa17.2■□□□□ 0.34
SYDE1-201ENST00000342784 NASPP49321 788 aaPredicted RBP17.2■□□□□ 0.34
SYDE1-201ENST00000342784 SKOR2Q2VWA4 1001 aaPredicted RBP17.2■□□□□ 0.34
SYDE1-201ENST00000342784 PDZRN3Q9UPQ7 1066 aa17.2■□□□□ 0.34
SYDE1-201ENST00000342784 WDR7Q9Y4E6 1490 aa17.19■□□□□ 0.34
SYDE1-201ENST00000342784 GAS2L3Q86XJ1 694 aa17.19■□□□□ 0.34
SYDE1-201ENST00000342784 NUP155O75694 1391 aa17.19■□□□□ 0.34
SYDE1-201ENST00000342784 FAM69CQ0P6D2 419 aa17.19■□□□□ 0.34
SYDE1-201ENST00000342784 CDC42BPAQ5VT25 1732 aa17.18■□□□□ 0.34
SYDE1-201ENST00000342784 E9PSI1 815 aa17.18■□□□□ 0.34
SYDE1-201ENST00000342784 APAF1O14727 1248 aa17.18■□□□□ 0.34
SYDE1-201ENST00000342784 TMF1P82094 1093 aa17.18■□□□□ 0.34
SYDE1-201ENST00000342784 RIMBP3CA6NJZ7 1639 aa17.18■□□□□ 0.34
SYDE1-201ENST00000342784 RIMBP3BA6NNM3 1639 aa17.18■□□□□ 0.34
SYDE1-201ENST00000342784 RIMBP3Q9UFD9 1639 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms