RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 CHGAP10645 457 aaKnown RBP29.75■■■□□ 2.35
VRK2-201ENST00000340157 TMEM131LA2VDJ0 1609 aa29.74■■■□□ 2.35
VRK2-201ENST00000340157 ADGRF5Q8IZF2 1346 aa29.74■■■□□ 2.35
VRK2-201ENST00000340157 SLC52A1Q9NWF4 448 aa29.72■■■□□ 2.35
VRK2-201ENST00000340157 IQGAP1P46940 1657 aa29.72■■■□□ 2.35
VRK2-201ENST00000340157 ARID4BQ4LE39 1312 aaPredicted RBP29.72■■■□□ 2.35
VRK2-201ENST00000340157 NEXMIFQ5QGS0 1516 aa29.71■■■□□ 2.35
VRK2-201ENST00000340157 KIF7Q2M1P5 1343 aa29.71■■■□□ 2.35
VRK2-201ENST00000340157 ST20-MTHFSA0A0A6YYL1 179 aa29.7■■■□□ 2.35
VRK2-201ENST00000340157 ZMYM3Q14202 1370 aa29.68■■■□□ 2.34
VRK2-201ENST00000340157 RPGRIP1LQ68CZ1 1315 aa29.66■■■□□ 2.34
VRK2-201ENST00000340157 PIK3C2GO75747 1445 aa29.64■■■□□ 2.34
VRK2-201ENST00000340157 CFAP70Q5T0N1 1121 aa29.61■■■□□ 2.33
VRK2-201ENST00000340157 ESF1Q9H501 851 aaKnown RBP29.61■■■□□ 2.33
VRK2-201ENST00000340157 SCAF11Q99590 1463 aaKnown RBP29.58■■■□□ 2.33
VRK2-201ENST00000340157 FER1L4A9Z1Z3 1794 aa29.58■■■□□ 2.33
VRK2-201ENST00000340157 SETBP1Q9Y6X0 1596 aa29.57■■■□□ 2.32
VRK2-201ENST00000340157 TESK2Q96S53 571 aa29.56■■■□□ 2.32
VRK2-201ENST00000340157 ZFYVE9O95405 1425 aa29.54■■■□□ 2.32
VRK2-201ENST00000340157 NUTM2DQ5VT03 806 aaPredicted RBP29.54■■■□□ 2.32
VRK2-201ENST00000340157 A2ML1A8K2U0 1454 aa29.54■■■□□ 2.32
VRK2-201ENST00000340157 C3P01024 1663 aa29.53■■■□□ 2.32
VRK2-201ENST00000340157 ADGRB1O14514 1584 aa29.53■■■□□ 2.32
VRK2-201ENST00000340157 C14orf93Q9H972 538 aaKnown RBP29.51■■■□□ 2.31
VRK2-201ENST00000340157 VGFO15240 615 aaPredicted RBP29.51■■■□□ 2.31
VRK2-201ENST00000340157 TNRQ92752 1358 aa29.48■■■□□ 2.31
VRK2-201ENST00000340157 DISP3Q9P2K9 1392 aa29.47■■■□□ 2.31
VRK2-201ENST00000340157 KDM5AP29375 1690 aaKnown RBP29.45■■■□□ 2.31
VRK2-201ENST00000340157 MYO3AQ8NEV4 1616 aa29.45■■■□□ 2.31
VRK2-201ENST00000340157 POLR3GLQ9BT43 218 aa29.44■■■□□ 2.3
VRK2-201ENST00000340157 UBR1Q8IWV7 1749 aa29.44■■■□□ 2.3
VRK2-201ENST00000340157 ANP32CO43423 234 aa29.44■■■□□ 2.3
VRK2-201ENST00000340157 STAG3Q9UJ98 1225 aa29.43■■■□□ 2.3
VRK2-201ENST00000340157 CEBPAP49715 358 aaPredicted RBP29.42■■■□□ 2.3
VRK2-201ENST00000340157 ASXL1Q8IXJ9 1541 aa29.42■■■□□ 2.3
VRK2-201ENST00000340157 EIF3AQ14152 1382 aaKnown RBP29.41■■■□□ 2.3
VRK2-201ENST00000340157 RIMS2Q9UQ26 1411 aa29.39■■■□□ 2.3
VRK2-201ENST00000340157 TMEM132EQ6IEE7 984 aa29.38■■■□□ 2.29
VRK2-201ENST00000340157 ARHGEF28Q8N1W1 1705 aaKnown RBP29.36■■■□□ 2.29
VRK2-201ENST00000340157 TMF1P82094 1093 aa29.36■■■□□ 2.29
VRK2-201ENST00000340157 ALKQ9UM73 1620 aa29.35■■■□□ 2.29
VRK2-201ENST00000340157 RIMS1Q86UR5 1692 aaKnown RBP29.35■■■□□ 2.29
VRK2-201ENST00000340157 ADAMTSL3P82987 1691 aa29.34■■■□□ 2.29
VRK2-201ENST00000340157 NLRP1Q9C000 1473 aa29.34■■■□□ 2.29
VRK2-201ENST00000340157 SETD1AO15047 1707 aaKnown RBP29.34■■■□□ 2.29
VRK2-201ENST00000340157 SENP3Q9H4L4 574 aaPredicted RBP29.33■■■□□ 2.29
VRK2-201ENST00000340157 QRICH2Q9H0J4 1663 aa29.33■■■□□ 2.29
VRK2-201ENST00000340157 NRXN3Q9Y4C0 1643 aa29.32■■■□□ 2.28
VRK2-201ENST00000340157 TRAK1Q9UPV9 953 aa29.31■■■□□ 2.28
VRK2-201ENST00000340157 CCER2I3L3R5 266 aa29.3■■■□□ 2.28
VRK2-201ENST00000340157 YTHDC1Q96MU7 727 aaKnown RBP29.29■■■□□ 2.28
VRK2-201ENST00000340157 PTPRMP28827 1452 aa29.28■■■□□ 2.28
VRK2-201ENST00000340157 SBNO2Q9Y2G9 1366 aa29.28■■■□□ 2.28
VRK2-201ENST00000340157 MYOM1P52179 1685 aa29.27■■■□□ 2.28
VRK2-201ENST00000340157 TMEM2Q9UHN6 1383 aa29.26■■■□□ 2.28
VRK2-201ENST00000340157 CENPJQ9HC77 1338 aaPredicted RBP29.26■■■□□ 2.27
VRK2-201ENST00000340157 PRKRIP1Q9H875 184 aaPredicted RBP29.26■■■□□ 2.27
VRK2-201ENST00000340157 PLPPR3Q6T4P5 718 aa29.25■■■□□ 2.27
VRK2-201ENST00000340157 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.21■■■□□ 2.27
VRK2-201ENST00000340157 YTHDC2Q9H6S0 1430 aaKnown RBP29.21■■■□□ 2.27
VRK2-201ENST00000340157 CDCA8Q53HL2 280 aa29.17■■■□□ 2.26
VRK2-201ENST00000340157 SLIT1O75093 1534 aa29.17■■■□□ 2.26
VRK2-201ENST00000340157 PER1O15534 1290 aaPredicted RBP29.17■■■□□ 2.26
VRK2-201ENST00000340157 ARHGAP23Q9P227 1491 aa29.16■■■□□ 2.26
VRK2-201ENST00000340157 SLC24A1O60721 1099 aa29.15■■■□□ 2.26
VRK2-201ENST00000340157 STK26Q9P289 416 aa29.15■■■□□ 2.26
VRK2-201ENST00000340157 PANK3Q9H999 370 aa29.14■■■□□ 2.26
VRK2-201ENST00000340157 LTKP29376 864 aa29.13■■■□□ 2.25
VRK2-201ENST00000340157 TULP4Q9NRJ4 1543 aa29.13■■■□□ 2.25
VRK2-201ENST00000340157 CEP170BQ9Y4F5 1589 aaPredicted RBP29.13■■■□□ 2.25
VRK2-201ENST00000340157 HDGFP51858 240 aaKnown RBP29.12■■■□□ 2.25
VRK2-201ENST00000340157 CCDC184Q52MB2 194 aa29.11■■■□□ 2.25
VRK2-201ENST00000340157 METP08581 1390 aa29.11■■■□□ 2.25
VRK2-201ENST00000340157 DLC1Q96QB1 1528 aa29.1■■■□□ 2.25
VRK2-201ENST00000340157 ADAMTS13Q76LX8 1427 aa29.09■■■□□ 2.25
VRK2-201ENST00000340157 LRPPRCP42704 1394 aaKnown RBP29.09■■■□□ 2.25
VRK2-201ENST00000340157 ZNF142P52746 1687 aaPredicted RBP29.09■■■□□ 2.25
VRK2-201ENST00000340157 PLEKHG1Q9ULL1 1385 aa29.08■■■□□ 2.25
VRK2-201ENST00000340157 KNDC1Q76NI1 1749 aa29.07■■■□□ 2.24
VRK2-201ENST00000340157 CNGB1Q14028 1251 aaPredicted RBP29.07■■■□□ 2.24
VRK2-201ENST00000340157 PRAM1Q96QH2 718 aa29.05■■■□□ 2.24
VRK2-201ENST00000340157 SETD1BQ9UPS6 1966 aaKnown RBP29.05■■■□□ 2.24
VRK2-201ENST00000340157 SAFB2Q14151 953 aaKnown RBP eCLIP29.04■■■□□ 2.24
VRK2-201ENST00000340157 TXNDC2Q86VQ3 553 aa29.04■■■□□ 2.24
VRK2-201ENST00000340157 MED14O60244 1454 aa29.04■■■□□ 2.24
VRK2-201ENST00000340157 ABCC11Q96J66 1382 aa29.04■■■□□ 2.24
VRK2-201ENST00000340157 CENPBP07199 599 aaPredicted RBP29.03■■■□□ 2.24
VRK2-201ENST00000340157 THEMISQ8N1K5 641 aaPredicted RBP29.02■■■□□ 2.24
VRK2-201ENST00000340157 PARD3Q8TEW0 1356 aa29.01■■■□□ 2.23
VRK2-201ENST00000340157 EVC2Q86UK5 1308 aa28.99■■■□□ 2.23
VRK2-201ENST00000340157 KTN1Q86UP2 1357 aaKnown RBP28.99■■■□□ 2.23
VRK2-201ENST00000340157 TECPR2O15040 1411 aa28.99■■■□□ 2.23
VRK2-201ENST00000340157 EID1Q9Y6B2 187 aa28.99■■■□□ 2.23
VRK2-201ENST00000340157 PLEKHH1Q9ULM0 1364 aa28.99■■■□□ 2.23
VRK2-201ENST00000340157 CPS1P31327 1500 aa28.98■■■□□ 2.23
VRK2-201ENST00000340157 POGKQ9P215 609 aa28.97■■■□□ 2.23
VRK2-201ENST00000340157 BCANQ96GW7 911 aa28.97■■■□□ 2.23
VRK2-201ENST00000340157 RALBP1Q15311 655 aa28.96■■■□□ 2.23
VRK2-201ENST00000340157 PUS7Q96PZ0 661 aaKnown RBP28.96■■■□□ 2.23
VRK2-201ENST00000340157 MINK1Q8N4C8 1332 aaPredicted RBP28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms