RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 STAG3Q9UJ98 1225 aa22.99■■□□□ 1.27
PRKN-201ENST00000338468 TMEM131LA2VDJ0 1609 aa22.98■■□□□ 1.27
PRKN-201ENST00000338468 MYO5BQ9ULV0 1848 aa22.97■■□□□ 1.27
PRKN-201ENST00000338468 SPHKAPQ2M3C7 1700 aa22.95■■□□□ 1.26
PRKN-201ENST00000338468 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
PRKN-201ENST00000338468 ZFYVE9O95405 1425 aa22.93■■□□□ 1.26
PRKN-201ENST00000338468 TRIM52Q96A61 297 aa22.93■■□□□ 1.26
PRKN-201ENST00000338468 EID1Q9Y6B2 187 aa22.93■■□□□ 1.26
PRKN-201ENST00000338468 TRPM2O94759 1503 aa22.88■■□□□ 1.25
PRKN-201ENST00000338468 RIMS2Q9UQ26 1411 aa22.88■■□□□ 1.25
PRKN-201ENST00000338468 CLTCL1P53675 1640 aa22.87■■□□□ 1.25
PRKN-201ENST00000338468 CHGAP10645 457 aaKnown RBP22.87■■□□□ 1.25
PRKN-201ENST00000338468 SLC4A1APQ9BWU0 796 aaKnown RBP22.87■■□□□ 1.25
PRKN-201ENST00000338468 SETD5Q9C0A6 1442 aa22.86■■□□□ 1.25
PRKN-201ENST00000338468 PLEKHG1Q9ULL1 1385 aa22.82■■□□□ 1.24
PRKN-201ENST00000338468 XIRP1Q702N8 1843 aaKnown RBP22.8■■□□□ 1.24
PRKN-201ENST00000338468 FOXD1Q16676 465 aa22.8■■□□□ 1.24
PRKN-201ENST00000338468 SLC26A8Q96RN1 970 aa22.8■■□□□ 1.24
PRKN-201ENST00000338468 RAB3GAP2Q9H2M9 1393 aa22.79■■□□□ 1.24
PRKN-201ENST00000338468 NUTM2DQ5VT03 806 aaPredicted RBP22.79■■□□□ 1.24
PRKN-201ENST00000338468 MPHOSPH9Q99550 1183 aa22.79■■□□□ 1.24
PRKN-201ENST00000338468 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.78■■□□□ 1.24
PRKN-201ENST00000338468 HDGFP51858 240 aaKnown RBP22.77■■□□□ 1.24
PRKN-201ENST00000338468 PPP1R15AO75807 674 aaPredicted RBP22.76■■□□□ 1.23
PRKN-201ENST00000338468 FAM135BQ49AJ0 1406 aa22.75■■□□□ 1.23
PRKN-201ENST00000338468 RGS17Q9UGC6 210 aaPredicted RBP22.75■■□□□ 1.23
PRKN-201ENST00000338468 ADAMTS13Q76LX8 1427 aa22.74■■□□□ 1.23
PRKN-201ENST00000338468 KIF1BO60333 1816 aa22.74■■□□□ 1.23
PRKN-201ENST00000338468 NEXMIFQ5QGS0 1516 aa22.73■■□□□ 1.23
PRKN-201ENST00000338468 TMEM94Q12767 1356 aa22.73■■□□□ 1.23
PRKN-201ENST00000338468 KCNA6P17658 529 aa22.72■■□□□ 1.23
PRKN-201ENST00000338468 BCANQ96GW7 911 aa22.72■■□□□ 1.23
PRKN-201ENST00000338468 ACIN1Q9UKV3 1341 aaKnown RBP22.72■■□□□ 1.23
PRKN-201ENST00000338468 NWD1Q149M9 1564 aa22.72■■□□□ 1.23
PRKN-201ENST00000338468 ZNF326Q5BKZ1 582 aaKnown RBP22.71■■□□□ 1.23
PRKN-201ENST00000338468 TBX22Q9Y458 520 aa22.7■■□□□ 1.22
PRKN-201ENST00000338468 NRXN3Q9Y4C0 1643 aa22.7■■□□□ 1.22
PRKN-201ENST00000338468 ROBO1Q9Y6N7 1651 aa22.69■■□□□ 1.22
PRKN-201ENST00000338468 DIP2AQ14689 1571 aa22.68■■□□□ 1.22
PRKN-201ENST00000338468 CHD2O14647 1828 aaKnown RBP22.68■■□□□ 1.22
PRKN-201ENST00000338468 SETBP1Q9Y6X0 1596 aa22.67■■□□□ 1.22
PRKN-201ENST00000338468 NKTRP30414 1462 aaKnown RBP22.66■■□□□ 1.22
PRKN-201ENST00000338468 HRCP23327 699 aa22.66■■□□□ 1.22
PRKN-201ENST00000338468 CCDC144AA2RUR9 1427 aa22.65■■□□□ 1.22
PRKN-201ENST00000338468 PROSER2Q86WR7 435 aaPredicted RBP22.64■■□□□ 1.21
PRKN-201ENST00000338468 SPATA31E1Q6ZUB1 1445 aa22.64■■□□□ 1.21
PRKN-201ENST00000338468 PTPRUQ92729 1446 aa22.62■■□□□ 1.21
PRKN-201ENST00000338468 PIK3R4Q99570 1358 aa22.62■■□□□ 1.21
PRKN-201ENST00000338468 PPLO60437 1756 aa22.61■■□□□ 1.21
PRKN-201ENST00000338468 POTEAQ6S8J7 498 aa22.61■■□□□ 1.21
PRKN-201ENST00000338468 RBM33Q96EV2 1170 aaKnown RBP22.61■■□□□ 1.21
PRKN-201ENST00000338468 MSH6P52701 1360 aa22.61■■□□□ 1.21
PRKN-201ENST00000338468 RPGRIP1LQ68CZ1 1315 aa22.6■■□□□ 1.21
PRKN-201ENST00000338468 METP08581 1390 aa22.58■■□□□ 1.21
PRKN-201ENST00000338468 VGFO15240 615 aaPredicted RBP22.57■■□□□ 1.2
PRKN-201ENST00000338468 ANKRD30BQ9BXX2 1392 aa22.56■■□□□ 1.2
PRKN-201ENST00000338468 PHLPP1O60346 1717 aa22.56■■□□□ 1.2
PRKN-201ENST00000338468 SETD1AO15047 1707 aaKnown RBP22.55■■□□□ 1.2
PRKN-201ENST00000338468 XRN1Q8IZH2 1706 aaKnown RBP22.55■■□□□ 1.2
PRKN-201ENST00000338468 IFT172Q9UG01 1749 aa22.55■■□□□ 1.2
PRKN-201ENST00000338468 RGL3Q3MIN7 710 aa22.55■■□□□ 1.2
PRKN-201ENST00000338468 AMOTL2Q9Y2J4 779 aa22.54■■□□□ 1.2
PRKN-201ENST00000338468 JCADQ9P266 1359 aa22.53■■□□□ 1.2
PRKN-201ENST00000338468 SLAIN2Q9P270 581 aa22.52■■□□□ 1.2
PRKN-201ENST00000338468 ADGRF5Q8IZF2 1346 aa22.52■■□□□ 1.2
PRKN-201ENST00000338468 NCOA3Q9Y6Q9 1424 aa22.49■■□□□ 1.19
PRKN-201ENST00000338468 COL16A1Q07092 1604 aaPredicted RBP22.47■■□□□ 1.19
PRKN-201ENST00000338468 PIK3C2GO75747 1445 aa22.44■■□□□ 1.18
PRKN-201ENST00000338468 C14orf37Q86TY3 774 aa22.43■■□□□ 1.18
PRKN-201ENST00000338468 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.43■■□□□ 1.18
PRKN-201ENST00000338468 NRXN1Q9ULB1 1477 aa22.42■■□□□ 1.18
PRKN-201ENST00000338468 PRAG1Q86YV5 1406 aa22.42■■□□□ 1.18
PRKN-201ENST00000338468 SPATA31A6Q5VVP1 1343 aa22.42■■□□□ 1.18
PRKN-201ENST00000338468 MYOM2P54296 1465 aa22.41■■□□□ 1.18
PRKN-201ENST00000338468 C19orf44Q9H6X5 657 aa22.41■■□□□ 1.18
PRKN-201ENST00000338468 LRP6O75581 1613 aa22.41■■□□□ 1.18
PRKN-201ENST00000338468 ASXL1Q8IXJ9 1541 aa22.41■■□□□ 1.18
PRKN-201ENST00000338468 MEX3CQ5U5Q3 659 aaKnown RBP22.4■■□□□ 1.18
PRKN-201ENST00000338468 PTCH1Q13635 1447 aa22.4■■□□□ 1.18
PRKN-201ENST00000338468 ROBO2Q9HCK4 1378 aa22.39■■□□□ 1.18
PRKN-201ENST00000338468 AHDC1Q5TGY3 1603 aaPredicted RBP22.39■■□□□ 1.18
PRKN-201ENST00000338468 ZNF772Q68DY9 489 aaPredicted RBP22.38■■□□□ 1.17
PRKN-201ENST00000338468 CADPS2Q86UW7 1296 aa22.38■■□□□ 1.17
PRKN-201ENST00000338468 SHPRHQ149N8 1683 aa22.37■■□□□ 1.17
PRKN-201ENST00000338468 ATF3P18847 181 aa22.36■■□□□ 1.17
PRKN-201ENST00000338468 NALCNQ8IZF0 1738 aa22.36■■□□□ 1.17
PRKN-201ENST00000338468 DCCP43146 1447 aa22.35■■□□□ 1.17
PRKN-201ENST00000338468 ADGRL3Q9HAR2 1447 aa22.35■■□□□ 1.17
PRKN-201ENST00000338468 C14orf93Q9H972 538 aaKnown RBP22.35■■□□□ 1.17
PRKN-201ENST00000338468 DHX57Q6P158 1386 aaKnown RBP22.35■■□□□ 1.17
PRKN-201ENST00000338468 TMEM132EQ6IEE7 984 aa22.34■■□□□ 1.17
PRKN-201ENST00000338468 LRPPRCP42704 1394 aaKnown RBP22.33■■□□□ 1.17
PRKN-201ENST00000338468 TRIM26Q12899 539 aaPredicted RBP22.32■■□□□ 1.16
PRKN-201ENST00000338468 CFAP70Q5T0N1 1121 aa22.32■■□□□ 1.16
PRKN-201ENST00000338468 TECPR2O15040 1411 aa22.31■■□□□ 1.16
PRKN-201ENST00000338468 ABCC11Q96J66 1382 aa22.3■■□□□ 1.16
PRKN-201ENST00000338468 LAMC1P11047 1609 aa22.3■■□□□ 1.16
PRKN-201ENST00000338468 MST1RQ04912 1400 aa22.3■■□□□ 1.16
PRKN-201ENST00000338468 KNDC1Q76NI1 1749 aa22.29■■□□□ 1.16
PRKN-201ENST00000338468 DCAF11Q8TEB1 546 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms