RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ADGRF5Q8IZF2 1346 aa8□□□□□ -1.13
PRKDC-202ENST00000338368 NUP160Q12769 1436 aa8□□□□□ -1.13
PRKDC-202ENST00000338368 PRAM1Q96QH2 718 aa8□□□□□ -1.13
PRKDC-202ENST00000338368 PLCH2O75038 1416 aa7.99□□□□□ -1.13
PRKDC-202ENST00000338368 LMOD3Q0VAK6 560 aa7.99□□□□□ -1.13
PRKDC-202ENST00000338368 EIF5BO60841 1220 aaKnown RBP7.99□□□□□ -1.13
PRKDC-202ENST00000338368 IPO9Q96P70 1041 aaKnown RBP7.99□□□□□ -1.13
PRKDC-202ENST00000338368 CASC1Q6TDU7 716 aa7.99□□□□□ -1.13
PRKDC-202ENST00000338368 RIPK4P57078 832 aa7.98□□□□□ -1.13
PRKDC-202ENST00000338368 ARXQ96QS3 562 aa7.98□□□□□ -1.13
PRKDC-202ENST00000338368 ADGRL1O94910 1474 aa7.98□□□□□ -1.13
PRKDC-202ENST00000338368 ZKSCAN2Q63HK3 967 aa7.98□□□□□ -1.13
PRKDC-202ENST00000338368 KIF14Q15058 1648 aa7.97□□□□□ -1.13
PRKDC-202ENST00000338368 A0A0G2JS52 829 aa7.97□□□□□ -1.13
PRKDC-202ENST00000338368 ADAMTS12P58397 1594 aa7.97□□□□□ -1.13
PRKDC-202ENST00000338368 TXNDC2Q86VQ3 553 aa7.97□□□□□ -1.13
PRKDC-202ENST00000338368 WDR62O43379 1518 aa7.96□□□□□ -1.13
PRKDC-202ENST00000338368 ANP32BQ92688 251 aaKnown RBP7.96□□□□□ -1.13
PRKDC-202ENST00000338368 APBB1O00213 710 aa7.96□□□□□ -1.14
PRKDC-202ENST00000338368 KAT6BQ8WYB5 2073 aa7.96□□□□□ -1.14
PRKDC-202ENST00000338368 IDI1Q13907 227 aa7.96□□□□□ -1.14
PRKDC-202ENST00000338368 LTV1Q96GA3 475 aaPredicted RBP7.95□□□□□ -1.14
PRKDC-202ENST00000338368 STK31Q9BXU1 1019 aa7.95□□□□□ -1.14
PRKDC-202ENST00000338368 FAM161AQ3B820 660 aa7.95□□□□□ -1.14
PRKDC-202ENST00000338368 FANCAO15360 1455 aa7.95□□□□□ -1.14
PRKDC-202ENST00000338368 CABP1Q9NZU7 370 aa7.95□□□□□ -1.14
PRKDC-202ENST00000338368 HMOX1P09601 288 aa7.95□□□□□ -1.14
PRKDC-202ENST00000338368 KIAA0556O60303 1618 aa7.95□□□□□ -1.14
PRKDC-202ENST00000338368 DZIP1LQ8IYY4 767 aaKnown RBP7.94□□□□□ -1.14
PRKDC-202ENST00000338368 SMG6Q86US8 1419 aaKnown RBP7.94□□□□□ -1.14
PRKDC-202ENST00000338368 SLC4A10Q6U841 1118 aa7.94□□□□□ -1.14
PRKDC-202ENST00000338368 TRAPPC8Q9Y2L5 1435 aa7.94□□□□□ -1.14
PRKDC-202ENST00000338368 OS9Q13438 667 aaPredicted RBP7.94□□□□□ -1.14
PRKDC-202ENST00000338368 RAPGEF6Q8TEU7 1601 aa7.94□□□□□ -1.14
PRKDC-202ENST00000338368 CHMP4AQ9BY43 222 aa7.94□□□□□ -1.14
PRKDC-202ENST00000338368 CSB-PGBD3P0DP91 1061 aa7.94□□□□□ -1.14
PRKDC-202ENST00000338368 CDK19Q9BWU1 502 aa7.94□□□□□ -1.14
PRKDC-202ENST00000338368 CFAP44Q96MT7 982 aa7.94□□□□□ -1.14
PRKDC-202ENST00000338368 ZNF692Q9BU19 519 aaPredicted RBP7.93□□□□□ -1.14
PRKDC-202ENST00000338368 FANCIQ9NVI1 1328 aa7.93□□□□□ -1.14
PRKDC-202ENST00000338368 HSP90AB1P08238 724 aaKnown RBP7.93□□□□□ -1.14
PRKDC-202ENST00000338368 C14orf93Q9H972 538 aaKnown RBP7.93□□□□□ -1.14
PRKDC-202ENST00000338368 DDX19BQ9UMR2 479 aa7.93□□□□□ -1.14
PRKDC-202ENST00000338368 BCAR3O75815 825 aa7.93□□□□□ -1.14
PRKDC-202ENST00000338368 GOLGA6L22H0YM25 854 aa7.93□□□□□ -1.14
PRKDC-202ENST00000338368 ABCA5Q8WWZ7 1642 aa7.93□□□□□ -1.14
PRKDC-202ENST00000338368 PANK1Q8TE04 598 aa7.93□□□□□ -1.14
PRKDC-202ENST00000338368 ANO8Q9HCE9 1232 aaPredicted RBP7.93□□□□□ -1.14
PRKDC-202ENST00000338368 DISP3Q9P2K9 1392 aa7.92□□□□□ -1.14
PRKDC-202ENST00000338368 EXOSC9Q06265 439 aaKnown RBP7.92□□□□□ -1.14
PRKDC-202ENST00000338368 SLC26A8Q96RN1 970 aa7.92□□□□□ -1.14
PRKDC-202ENST00000338368 FBXO31Q5XUX0 539 aaPredicted RBP7.92□□□□□ -1.14
PRKDC-202ENST00000338368 GNAI1P63096 354 aa7.92□□□□□ -1.14
PRKDC-202ENST00000338368 PZPP20742 1482 aa7.92□□□□□ -1.14
PRKDC-202ENST00000338368 PRKAR2BP31323 418 aa7.92□□□□□ -1.14
PRKDC-202ENST00000338368 MFAP1P55081 439 aaKnown RBP7.92□□□□□ -1.14
PRKDC-202ENST00000338368 HSCBQ8IWL3 235 aa7.92□□□□□ -1.14
PRKDC-202ENST00000338368 THEMISQ8N1K5 641 aaPredicted RBP7.91□□□□□ -1.14
PRKDC-202ENST00000338368 MAGI3Q5TCQ9 1506 aa7.91□□□□□ -1.14
PRKDC-202ENST00000338368 NCLP19338 710 aaKnown RBP7.91□□□□□ -1.14
PRKDC-202ENST00000338368 SLFN5Q08AF3 891 aa7.91□□□□□ -1.14
PRKDC-202ENST00000338368 DENND4BO75064 1496 aaPredicted RBP7.91□□□□□ -1.14
PRKDC-202ENST00000338368 SPRYD3Q8NCJ5 442 aa7.91□□□□□ -1.14
PRKDC-202ENST00000338368 HMMRO75330 724 aa7.91□□□□□ -1.14
PRKDC-202ENST00000338368 GLIPR1L2Q4G1C9 344 aa7.91□□□□□ -1.14
PRKDC-202ENST00000338368 AEBP2Q6ZN18 517 aaPredicted RBP7.9□□□□□ -1.14
PRKDC-202ENST00000338368 TESK2Q96S53 571 aa7.9□□□□□ -1.14
PRKDC-202ENST00000338368 ASXL2Q76L83 1435 aa7.9□□□□□ -1.14
PRKDC-202ENST00000338368 WWC1Q8IX03 1113 aa7.9□□□□□ -1.14
PRKDC-202ENST00000338368 ATAD2Q6PL18 1390 aa7.9□□□□□ -1.14
PRKDC-202ENST00000338368 NLRP6P59044 892 aa7.9□□□□□ -1.15
PRKDC-202ENST00000338368 ANKRD45Q5TZF3 282 aa7.9□□□□□ -1.15
PRKDC-202ENST00000338368 WAPLQ7Z5K2 1190 aa7.9□□□□□ -1.15
PRKDC-202ENST00000338368 SCAF11Q99590 1463 aaKnown RBP7.9□□□□□ -1.15
PRKDC-202ENST00000338368 API5Q9BZZ5 524 aaKnown RBP7.9□□□□□ -1.15
PRKDC-202ENST00000338368 PDE3AQ14432 1141 aa7.89□□□□□ -1.15
PRKDC-202ENST00000338368 EIF4G3O43432 1585 aaKnown RBP7.89□□□□□ -1.15
PRKDC-202ENST00000338368 AAMPQ13685 434 aa7.89□□□□□ -1.15
PRKDC-202ENST00000338368 SLC4A3P48751 1232 aa7.89□□□□□ -1.15
PRKDC-202ENST00000338368 KIF16BQ96L93 1317 aa7.89□□□□□ -1.15
PRKDC-202ENST00000338368 NOS1P29475 1434 aa7.89□□□□□ -1.15
PRKDC-202ENST00000338368 PER1O15534 1290 aaPredicted RBP7.89□□□□□ -1.15
PRKDC-202ENST00000338368 RALGAPBQ86X10 1494 aa7.89□□□□□ -1.15
PRKDC-202ENST00000338368 SLKQ9H2G2 1235 aaPredicted RBP7.89□□□□□ -1.15
PRKDC-202ENST00000338368 NSD3Q9BZ95 1437 aa7.89□□□□□ -1.15
PRKDC-202ENST00000338368 NUDT16Q96DE0 195 aaKnown RBP7.89□□□□□ -1.15
PRKDC-202ENST00000338368 TEFQ10587 303 aa7.89□□□□□ -1.15
PRKDC-202ENST00000338368 RTEL1-TNFRSF6BF6WH68 1400 aa7.88□□□□□ -1.15
PRKDC-202ENST00000338368 PRAG1Q86YV5 1406 aa7.88□□□□□ -1.15
PRKDC-202ENST00000338368 SAMD9Q5K651 1589 aa7.88□□□□□ -1.15
PRKDC-202ENST00000338368 ADGRL2O95490 1459 aa7.88□□□□□ -1.15
PRKDC-202ENST00000338368 SYCP2Q9BX26 1530 aa7.88□□□□□ -1.15
PRKDC-202ENST00000338368 PSME1Q06323 249 aa7.88□□□□□ -1.15
PRKDC-202ENST00000338368 WDR63Q8IWG1 891 aa7.88□□□□□ -1.15
PRKDC-202ENST00000338368 DUOX2Q9NRD8 1548 aa7.88□□□□□ -1.15
PRKDC-202ENST00000338368 TSR2Q969E8 191 aaKnown RBP7.87□□□□□ -1.15
PRKDC-202ENST00000338368 CCDC61Q9Y6R9 512 aa7.87□□□□□ -1.15
PRKDC-202ENST00000338368 WDR7Q9Y4E6 1490 aa7.87□□□□□ -1.15
PRKDC-202ENST00000338368 NUTM2GQ5VZR2 741 aa7.87□□□□□ -1.15
PRKDC-202ENST00000338368 PPP6R1Q9UPN7 881 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms