RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 NUTM2DQ5VT03 806 aaPredicted RBP31.49■■■□□ 2.63
RAB28-203ENST00000338176 BCANQ96GW7 911 aa31.44■■■□□ 2.62
RAB28-203ENST00000338176 LRRC7Q96NW7 1537 aa31.43■■■□□ 2.62
RAB28-203ENST00000338176 PPP1R15AO75807 674 aaPredicted RBP31.43■■■□□ 2.62
RAB28-203ENST00000338176 SLC4A1APQ9BWU0 796 aaKnown RBP31.43■■■□□ 2.62
RAB28-203ENST00000338176 CLTCL1P53675 1640 aa31.41■■■□□ 2.62
RAB28-203ENST00000338176 PLEKHG1Q9ULL1 1385 aa31.39■■■□□ 2.61
RAB28-203ENST00000338176 TRPM2O94759 1503 aa31.39■■■□□ 2.61
RAB28-203ENST00000338176 FOXD1Q16676 465 aa31.38■■■□□ 2.61
RAB28-203ENST00000338176 HDGFP51858 240 aaKnown RBP31.35■■■□□ 2.61
RAB28-203ENST00000338176 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.34■■■□□ 2.61
RAB28-203ENST00000338176 PIP4K2BP78356 416 aa31.33■■■□□ 2.61
RAB28-203ENST00000338176 ALKQ9UM73 1620 aa31.32■■■□□ 2.61
RAB28-203ENST00000338176 XIRP1Q702N8 1843 aaKnown RBP31.32■■■□□ 2.61
RAB28-203ENST00000338176 ZNF326Q5BKZ1 582 aaKnown RBP31.32■■■□□ 2.6
RAB28-203ENST00000338176 SETD5Q9C0A6 1442 aa31.31■■■□□ 2.6
RAB28-203ENST00000338176 SCAF1Q9H7N4 1312 aaKnown RBP31.31■■■□□ 2.6
RAB28-203ENST00000338176 KCNA6P17658 529 aa31.31■■■□□ 2.6
RAB28-203ENST00000338176 RBM33Q96EV2 1170 aaKnown RBP31.31■■■□□ 2.6
RAB28-203ENST00000338176 ADAMTS13Q76LX8 1427 aa31.29■■■□□ 2.6
RAB28-203ENST00000338176 TOM1O60784 492 aa31.28■■■□□ 2.6
RAB28-203ENST00000338176 MPHOSPH9Q99550 1183 aa31.28■■■□□ 2.6
RAB28-203ENST00000338176 KIF1BO60333 1816 aa31.27■■■□□ 2.6
RAB28-203ENST00000338176 NWD1Q149M9 1564 aa31.25■■■□□ 2.59
RAB28-203ENST00000338176 TBX22Q9Y458 520 aa31.24■■■□□ 2.59
RAB28-203ENST00000338176 CHD2O14647 1828 aaKnown RBP31.24■■■□□ 2.59
RAB28-203ENST00000338176 TMEM94Q12767 1356 aa31.24■■■□□ 2.59
RAB28-203ENST00000338176 PROSER2Q86WR7 435 aaPredicted RBP31.23■■■□□ 2.59
RAB28-203ENST00000338176 RAB3GAP2Q9H2M9 1393 aa31.23■■■□□ 2.59
RAB28-203ENST00000338176 NEXMIFQ5QGS0 1516 aa31.22■■■□□ 2.59
RAB28-203ENST00000338176 NRXN3Q9Y4C0 1643 aa31.2■■■□□ 2.59
RAB28-203ENST00000338176 NKTRP30414 1462 aaKnown RBP31.18■■■□□ 2.58
RAB28-203ENST00000338176 DIP2AQ14689 1571 aa31.17■■■□□ 2.58
RAB28-203ENST00000338176 HSPA1LP34931 641 aa31.15■■■□□ 2.58
RAB28-203ENST00000338176 SETBP1Q9Y6X0 1596 aa31.14■■■□□ 2.58
RAB28-203ENST00000338176 PTPRUQ92729 1446 aa31.14■■■□□ 2.58
RAB28-203ENST00000338176 CCDC144AA2RUR9 1427 aa31.1■■■□□ 2.57
RAB28-203ENST00000338176 METP08581 1390 aa31.09■■■□□ 2.57
RAB28-203ENST00000338176 AMOTL2Q9Y2J4 779 aa31.08■■■□□ 2.57
RAB28-203ENST00000338176 PIK3R4Q99570 1358 aa31.08■■■□□ 2.57
RAB28-203ENST00000338176 PPLO60437 1756 aa31.06■■■□□ 2.56
RAB28-203ENST00000338176 RGL3Q3MIN7 710 aa31.06■■■□□ 2.56
RAB28-203ENST00000338176 SPATA31E1Q6ZUB1 1445 aa31.03■■■□□ 2.56
RAB28-203ENST00000338176 RPGRIP1LQ68CZ1 1315 aa31.03■■■□□ 2.56
RAB28-203ENST00000338176 VGFO15240 615 aaPredicted RBP31.02■■■□□ 2.56
RAB28-203ENST00000338176 ACIN1Q9UKV3 1341 aaKnown RBP31.02■■■□□ 2.56
RAB28-203ENST00000338176 MSH6P52701 1360 aa31.01■■■□□ 2.56
RAB28-203ENST00000338176 XRN1Q8IZH2 1706 aaKnown RBP31.01■■■□□ 2.55
RAB28-203ENST00000338176 C14orf37Q86TY3 774 aa30.98■■■□□ 2.55
RAB28-203ENST00000338176 SETD1AO15047 1707 aaKnown RBP30.98■■■□□ 2.55
RAB28-203ENST00000338176 ADGRF5Q8IZF2 1346 aa30.97■■■□□ 2.55
RAB28-203ENST00000338176 IFT172Q9UG01 1749 aa30.94■■■□□ 2.54
RAB28-203ENST00000338176 DISP3Q9P2K9 1392 aa30.94■■■□□ 2.54
RAB28-203ENST00000338176 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.93■■■□□ 2.54
RAB28-203ENST00000338176 ROBO1Q9Y6N7 1651 aa30.93■■■□□ 2.54
RAB28-203ENST00000338176 FAM135BQ49AJ0 1406 aa30.92■■■□□ 2.54
RAB28-203ENST00000338176 NCOA3Q9Y6Q9 1424 aa30.92■■■□□ 2.54
RAB28-203ENST00000338176 HRCP23327 699 aa30.91■■■□□ 2.54
RAB28-203ENST00000338176 SLAIN2Q9P270 581 aa30.91■■■□□ 2.54
RAB28-203ENST00000338176 ANKRD30BQ9BXX2 1392 aa30.89■■■□□ 2.54
RAB28-203ENST00000338176 C19orf44Q9H6X5 657 aa30.88■■■□□ 2.53
RAB28-203ENST00000338176 ATF3P18847 181 aa30.83■■■□□ 2.53
RAB28-203ENST00000338176 ROBO2Q9HCK4 1378 aa30.83■■■□□ 2.53
RAB28-203ENST00000338176 CADPS2Q86UW7 1296 aa30.81■■■□□ 2.52
RAB28-203ENST00000338176 NALCNQ8IZF0 1738 aa30.79■■■□□ 2.52
RAB28-203ENST00000338176 PIK3C2GO75747 1445 aa30.79■■■□□ 2.52
RAB28-203ENST00000338176 MED1Q15648 1581 aaPredicted RBP30.79■■■□□ 2.52
RAB28-203ENST00000338176 TMEM132EQ6IEE7 984 aa30.78■■■□□ 2.52
RAB28-203ENST00000338176 ASXL1Q8IXJ9 1541 aa30.77■■■□□ 2.52
RAB28-203ENST00000338176 PTCH1Q13635 1447 aa30.77■■■□□ 2.52
RAB28-203ENST00000338176 ADGRL3Q9HAR2 1447 aa30.76■■■□□ 2.51
RAB28-203ENST00000338176 STK26Q9P289 416 aa30.76■■■□□ 2.51
RAB28-203ENST00000338176 ILDR2Q71H61 639 aa30.75■■■□□ 2.51
RAB28-203ENST00000338176 DCCP43146 1447 aa30.73■■■□□ 2.51
RAB28-203ENST00000338176 PHLPP1O60346 1717 aa30.73■■■□□ 2.51
RAB28-203ENST00000338176 NRXN1Q9ULB1 1477 aa30.72■■■□□ 2.51
RAB28-203ENST00000338176 PRAG1Q86YV5 1406 aa30.71■■■□□ 2.51
RAB28-203ENST00000338176 MYOM2P54296 1465 aa30.71■■■□□ 2.51
RAB28-203ENST00000338176 MST1RQ04912 1400 aa30.71■■■□□ 2.51
RAB28-203ENST00000338176 CFAP70Q5T0N1 1121 aa30.7■■■□□ 2.51
RAB28-203ENST00000338176 BRINP3Q76B58 766 aa30.69■■■□□ 2.5
RAB28-203ENST00000338176 KDM2AQ9Y2K7 1162 aa30.69■■■□□ 2.5
RAB28-203ENST00000338176 C14orf93Q9H972 538 aaKnown RBP30.68■■■□□ 2.5
RAB28-203ENST00000338176 LRPPRCP42704 1394 aaKnown RBP30.67■■■□□ 2.5
RAB28-203ENST00000338176 WAPLQ7Z5K2 1190 aa30.67■■■□□ 2.5
RAB28-203ENST00000338176 DCAF11Q8TEB1 546 aa30.66■■■□□ 2.5
RAB28-203ENST00000338176 COL16A1Q07092 1604 aaPredicted RBP30.65■■■□□ 2.5
RAB28-203ENST00000338176 PLEKHH1Q9ULM0 1364 aa30.64■■■□□ 2.5
RAB28-203ENST00000338176 YTHDC2Q9H6S0 1430 aaKnown RBP30.64■■■□□ 2.5
RAB28-203ENST00000338176 DHX57Q6P158 1386 aaKnown RBP30.63■■■□□ 2.49
RAB28-203ENST00000338176 TECPR2O15040 1411 aa30.62■■■□□ 2.49
RAB28-203ENST00000338176 ABCC11Q96J66 1382 aa30.62■■■□□ 2.49
RAB28-203ENST00000338176 AHDC1Q5TGY3 1603 aaPredicted RBP30.61■■■□□ 2.49
RAB28-203ENST00000338176 KNDC1Q76NI1 1749 aa30.61■■■□□ 2.49
RAB28-203ENST00000338176 DDX17Q92841 729 aaKnown RBP30.61■■■□□ 2.49
RAB28-203ENST00000338176 LAMC1P11047 1609 aa30.59■■■□□ 2.49
RAB28-203ENST00000338176 C1orf167Q5SNV9 1468 aa30.59■■■□□ 2.49
RAB28-203ENST00000338176 ORAI2Q96SN7 254 aa30.55■■■□□ 2.48
RAB28-203ENST00000338176 PHF23Q9BUL5 403 aaPredicted RBP30.55■■■□□ 2.48
RAB28-203ENST00000338176 JCADQ9P266 1359 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms