RNA–Protein interactions for RNA: ENST00000338104.10

TTC8-201, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 1 (best) BASIC

Gene TTC8, Length 2,226 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-201ENST00000338104 ZFYVE9O95405 1425 aa17.74■□□□□ 0.43
TTC8-201ENST00000338104 TMEM2Q9UHN6 1383 aa17.74■□□□□ 0.43
TTC8-201ENST00000338104 RIMS2Q9UQ26 1411 aa17.73■□□□□ 0.43
TTC8-201ENST00000338104 ADGRF5Q8IZF2 1346 aa17.73■□□□□ 0.43
TTC8-201ENST00000338104 NBPF8Q3BBV2 869 aa17.72■□□□□ 0.43
TTC8-201ENST00000338104 THEMISQ8N1K5 641 aaPredicted RBP17.72■□□□□ 0.43
TTC8-201ENST00000338104 RPGRIP1LQ68CZ1 1315 aa17.72■□□□□ 0.43
TTC8-201ENST00000338104 LMTK3Q96Q04 1460 aa17.72■□□□□ 0.43
TTC8-201ENST00000338104 ARHGAP23Q9P227 1491 aa17.72■□□□□ 0.43
TTC8-201ENST00000338104 LTKP29376 864 aa17.71■□□□□ 0.43
TTC8-201ENST00000338104 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.43
TTC8-201ENST00000338104 SLIT1O75093 1534 aa17.71■□□□□ 0.43
TTC8-201ENST00000338104 ZEB1P37275 1124 aaPredicted RBP17.7■□□□□ 0.42
TTC8-201ENST00000338104 HSPA2P54652 639 aa17.7■□□□□ 0.42
TTC8-201ENST00000338104 MYOM2P54296 1465 aa17.69■□□□□ 0.42
TTC8-201ENST00000338104 NRXN1Q9ULB1 1477 aa17.68■□□□□ 0.42
TTC8-201ENST00000338104 PRAG1Q86YV5 1406 aa17.68■□□□□ 0.42
TTC8-201ENST00000338104 TXNDC2Q86VQ3 553 aa17.67■□□□□ 0.42
TTC8-201ENST00000338104 VGFO15240 615 aaPredicted RBP17.66■□□□□ 0.42
TTC8-201ENST00000338104 PIK3C2GO75747 1445 aa17.65■□□□□ 0.42
TTC8-201ENST00000338104 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.64■□□□□ 0.41
TTC8-201ENST00000338104 STAC3Q96MF2 364 aa17.64■□□□□ 0.41
TTC8-201ENST00000338104 NRXN3Q9Y4C0 1643 aa17.63■□□□□ 0.41
TTC8-201ENST00000338104 SCAF11Q99590 1463 aaKnown RBP17.63■□□□□ 0.41
TTC8-201ENST00000338104 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
TTC8-201ENST00000338104 EID1Q9Y6B2 187 aa17.62■□□□□ 0.41
TTC8-201ENST00000338104 NCKAP5LQ9HCH0 1330 aa17.62■□□□□ 0.41
TTC8-201ENST00000338104 TRPM1Q7Z4N2 1603 aa17.62■□□□□ 0.41
TTC8-201ENST00000338104 NBPF1Q3BBV0 1214 aa17.62■□□□□ 0.41
TTC8-201ENST00000338104 ANKLE2Q86XL3 938 aa17.62■□□□□ 0.41
TTC8-201ENST00000338104 HDGFP51858 240 aaKnown RBP17.61■□□□□ 0.41
TTC8-201ENST00000338104 IQGAP1P46940 1657 aa17.6■□□□□ 0.41
TTC8-201ENST00000338104 PLEKHG1Q9ULL1 1385 aa17.6■□□□□ 0.41
TTC8-201ENST00000338104 POLR1AO95602 1720 aaPredicted RBP17.6■□□□□ 0.41
TTC8-201ENST00000338104 STRCQ7RTU9 1775 aa17.59■□□□□ 0.41
TTC8-201ENST00000338104 C14orf93Q9H972 538 aaKnown RBP17.59■□□□□ 0.41
TTC8-201ENST00000338104 SETBP1Q9Y6X0 1596 aa17.58■□□□□ 0.41
TTC8-201ENST00000338104 ADAMTS13Q76LX8 1427 aa17.58■□□□□ 0.4
TTC8-201ENST00000338104 SETD1AO15047 1707 aaKnown RBP17.58■□□□□ 0.4
TTC8-201ENST00000338104 ALKQ9UM73 1620 aa17.58■□□□□ 0.4
TTC8-201ENST00000338104 RALGAPBQ86X10 1494 aa17.57■□□□□ 0.4
TTC8-201ENST00000338104 SLC26A8Q96RN1 970 aa17.57■□□□□ 0.4
TTC8-201ENST00000338104 KIAA1210Q9ULL0 1709 aa17.56■□□□□ 0.4
TTC8-201ENST00000338104 MED14O60244 1454 aa17.56■□□□□ 0.4
TTC8-201ENST00000338104 ASXL1Q8IXJ9 1541 aa17.56■□□□□ 0.4
TTC8-201ENST00000338104 TMEM132EQ6IEE7 984 aa17.56■□□□□ 0.4
TTC8-201ENST00000338104 BCANQ96GW7 911 aa17.56■□□□□ 0.4
TTC8-201ENST00000338104 NPHP4O75161 1426 aaPredicted RBP17.55■□□□□ 0.4
TTC8-201ENST00000338104 ADGRB1O14514 1584 aa17.54■□□□□ 0.4
TTC8-201ENST00000338104 ROCK2O75116 1388 aaKnown RBP17.53■□□□□ 0.4
TTC8-201ENST00000338104 METP08581 1390 aa17.53■□□□□ 0.4
TTC8-201ENST00000338104 AEBP2Q6ZN18 517 aaPredicted RBP17.53■□□□□ 0.4
TTC8-201ENST00000338104 LAMC1P11047 1609 aa17.53■□□□□ 0.4
TTC8-201ENST00000338104 GPRASP1Q5JY77 1395 aa17.52■□□□□ 0.4
TTC8-201ENST00000338104 CARD11Q9BXL7 1154 aa17.51■□□□□ 0.39
TTC8-201ENST00000338104 TBX22Q9Y458 520 aa17.5■□□□□ 0.39
TTC8-201ENST00000338104 PTPRUQ92729 1446 aa17.48■□□□□ 0.39
TTC8-201ENST00000338104 DIP2AQ14689 1571 aa17.47■□□□□ 0.39
TTC8-201ENST00000338104 STK26Q9P289 416 aa17.46■□□□□ 0.39
TTC8-201ENST00000338104 YTHDC2Q9H6S0 1430 aaKnown RBP17.46■□□□□ 0.39
TTC8-201ENST00000338104 HIRIP3Q9BW71 556 aaPredicted RBP17.45■□□□□ 0.38
TTC8-201ENST00000338104 TRAK1Q9UPV9 953 aa17.45■□□□□ 0.38
TTC8-201ENST00000338104 CHD2O14647 1828 aaKnown RBP17.43■□□□□ 0.38
TTC8-201ENST00000338104 USP47Q96K76 1375 aa17.43■□□□□ 0.38
TTC8-201ENST00000338104 LRPPRCP42704 1394 aaKnown RBP17.43■□□□□ 0.38
TTC8-201ENST00000338104 HSPA5P11021 654 aaKnown RBP17.42■□□□□ 0.38
TTC8-201ENST00000338104 ARHGEF28Q8N1W1 1705 aaKnown RBP17.42■□□□□ 0.38
TTC8-201ENST00000338104 AMOTL2Q9Y2J4 779 aa17.41■□□□□ 0.38
TTC8-201ENST00000338104 ABCC11Q96J66 1382 aa17.41■□□□□ 0.38
TTC8-201ENST00000338104 XRN1Q8IZH2 1706 aaKnown RBP17.4■□□□□ 0.38
TTC8-201ENST00000338104 STRCP1A6NGW2 1772 aa17.4■□□□□ 0.38
TTC8-201ENST00000338104 ST20-MTHFSA0A0A6YYL1 179 aa17.4■□□□□ 0.38
TTC8-201ENST00000338104 EIF4G2P78344 907 aaKnown RBP eCLIP17.4■□□□□ 0.38
TTC8-201ENST00000338104 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
TTC8-201ENST00000338104 KCNA6P17658 529 aa17.4■□□□□ 0.38
TTC8-201ENST00000338104 ROBO2Q9HCK4 1378 aa17.39■□□□□ 0.37
TTC8-201ENST00000338104 TECPR2O15040 1411 aa17.39■□□□□ 0.37
TTC8-201ENST00000338104 KNDC1Q76NI1 1749 aa17.39■□□□□ 0.37
TTC8-201ENST00000338104 WAPLQ7Z5K2 1190 aa17.39■□□□□ 0.37
TTC8-201ENST00000338104 PLEKHH1Q9ULM0 1364 aa17.38■□□□□ 0.37
TTC8-201ENST00000338104 CPS1P31327 1500 aa17.37■□□□□ 0.37
TTC8-201ENST00000338104 SAFB2Q14151 953 aaKnown RBP eCLIP17.36■□□□□ 0.37
TTC8-201ENST00000338104 PRAM1Q96QH2 718 aa17.36■□□□□ 0.37
TTC8-201ENST00000338104 DLC1Q96QB1 1528 aa17.36■□□□□ 0.37
TTC8-201ENST00000338104 NWD1Q149M9 1564 aa17.36■□□□□ 0.37
TTC8-201ENST00000338104 ZNF335Q9H4Z2 1342 aaPredicted RBP17.36■□□□□ 0.37
TTC8-201ENST00000338104 DMRT2Q9Y5R5 561 aa17.36■□□□□ 0.37
TTC8-201ENST00000338104 TESK2Q96S53 571 aa17.35■□□□□ 0.37
TTC8-201ENST00000338104 RBM33Q96EV2 1170 aaKnown RBP17.35■□□□□ 0.37
TTC8-201ENST00000338104 CENPJQ9HC77 1338 aaPredicted RBP17.34■□□□□ 0.37
TTC8-201ENST00000338104 PTCH1Q13635 1447 aa17.33■□□□□ 0.37
TTC8-201ENST00000338104 QRICH2Q9H0J4 1663 aa17.33■□□□□ 0.36
TTC8-201ENST00000338104 EIF3AQ14152 1382 aaKnown RBP17.33■□□□□ 0.36
TTC8-201ENST00000338104 FAM135BQ49AJ0 1406 aa17.32■□□□□ 0.36
TTC8-201ENST00000338104 SIRT1Q96EB6 747 aa17.32■□□□□ 0.36
TTC8-201ENST00000338104 C11orf95C9JLR9 678 aaPredicted RBP17.32■□□□□ 0.36
TTC8-201ENST00000338104 POGKQ9P215 609 aa17.32■□□□□ 0.36
TTC8-201ENST00000338104 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.31■□□□□ 0.36
TTC8-201ENST00000338104 MINK1Q8N4C8 1332 aaPredicted RBP17.29■□□□□ 0.36
TTC8-201ENST00000338104 NKTRP30414 1462 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms