RNA–Protein interactions for RNA: ENST00000334121.10

SREK1-202, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SREK1, Length 6,781 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-202ENST00000334121 ST18O60284 1047 aa13.72□□□□□ -0.21
SREK1-202ENST00000334121 LMOD3Q0VAK6 560 aa13.72□□□□□ -0.21
SREK1-202ENST00000334121 TNNT3P45378 269 aaPredicted RBP13.72□□□□□ -0.21
SREK1-202ENST00000334121 CCDC43Q96MW1 224 aaKnown RBP13.71□□□□□ -0.21
SREK1-202ENST00000334121 ATF3P18847 181 aa13.71□□□□□ -0.21
SREK1-202ENST00000334121 NLRP2Q9NX02 1062 aa13.71□□□□□ -0.21
SREK1-202ENST00000334121 FHOD3Q2V2M9 1422 aa13.71□□□□□ -0.21
SREK1-202ENST00000334121 FAM69CQ0P6D2 419 aa13.71□□□□□ -0.22
SREK1-202ENST00000334121 TSR1Q2NL82 804 aaKnown RBP13.71□□□□□ -0.22
SREK1-202ENST00000334121 IFIT2P09913 472 aaKnown RBP13.7□□□□□ -0.22
SREK1-202ENST00000334121 FKBP5Q13451 457 aaPredicted RBP13.7□□□□□ -0.22
SREK1-202ENST00000334121 JPH4Q96JJ6 628 aa13.69□□□□□ -0.22
SREK1-202ENST00000334121 TRIM29Q14134 588 aa13.69□□□□□ -0.22
SREK1-202ENST00000334121 HDAC5Q9UQL6 1122 aa13.69□□□□□ -0.22
SREK1-202ENST00000334121 GOLGA6L19H0YKK7 550 aa13.68□□□□□ -0.22
SREK1-202ENST00000334121 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
SREK1-202ENST00000334121 CSPP1Q1MSJ5 1256 aa13.68□□□□□ -0.22
SREK1-202ENST00000334121 CRBNQ96SW2 442 aa13.68□□□□□ -0.22
SREK1-202ENST00000334121 BECN2A8MW95 431 aa13.68□□□□□ -0.22
SREK1-202ENST00000334121 RIC3Q7Z5B4 369 aa13.68□□□□□ -0.22
SREK1-202ENST00000334121 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.68□□□□□ -0.225e-7■■■■■ 81.2
SREK1-202ENST00000334121 APAF1O14727 1248 aa13.67□□□□□ -0.22
SREK1-202ENST00000334121 DCAF8L1A6NGE4 600 aa13.67□□□□□ -0.22
SREK1-202ENST00000334121 RIPK4P57078 832 aa13.67□□□□□ -0.22
SREK1-202ENST00000334121 WASHC4Q2M389 1173 aa13.67□□□□□ -0.22
SREK1-202ENST00000334121 CPLX1O14810 134 aa13.67□□□□□ -0.22
SREK1-202ENST00000334121 ATP2B2Q01814 1243 aa13.66□□□□□ -0.22
SREK1-202ENST00000334121 ZFYVE27Q5T4F4 411 aa13.66□□□□□ -0.22
SREK1-202ENST00000334121 CCER2I3L3R5 266 aa13.66□□□□□ -0.22
SREK1-202ENST00000334121 NAP1L1P55209 391 aaKnown RBP13.66□□□□□ -0.22
SREK1-202ENST00000334121 TMEM132AQ24JP5 1023 aa13.66□□□□□ -0.22
SREK1-202ENST00000334121 CHMP4AQ9BY43 222 aa13.66□□□□□ -0.22
SREK1-202ENST00000334121 TSPYL4Q9UJ04 414 aa13.66□□□□□ -0.22
SREK1-202ENST00000334121 TPM2P07951 284 aa13.65□□□□□ -0.22
SREK1-202ENST00000334121 FAM161AQ3B820 660 aa13.65□□□□□ -0.22
SREK1-202ENST00000334121 EXOC6Q8TAG9 804 aa13.65□□□□□ -0.22
SREK1-202ENST00000334121 DDX49Q9Y6V7 483 aaKnown RBP13.65□□□□□ -0.22
SREK1-202ENST00000334121 TMEM132EQ6IEE7 984 aa13.65□□□□□ -0.22
SREK1-202ENST00000334121 CCAR1Q8IX12 1150 aaKnown RBP13.65□□□□□ -0.22
SREK1-202ENST00000334121 SKIDA1Q1XH10 827 aa13.64□□□□□ -0.23
SREK1-202ENST00000334121 VPS37CA5D8V6 355 aaPredicted RBP13.64□□□□□ -0.23
SREK1-202ENST00000334121 CABP2Q9NPB3 220 aa13.64□□□□□ -0.23
SREK1-202ENST00000334121 G3BP1Q13283 466 aaKnown RBP eCLIP13.64□□□□□ -0.23
SREK1-202ENST00000334121 RAPGEF4Q8WZA2 1011 aa13.64□□□□□ -0.23
SREK1-202ENST00000334121 EVC2Q86UK5 1308 aa13.64□□□□□ -0.23
SREK1-202ENST00000334121 ATP2B1P20020 1258 aa13.63□□□□□ -0.23
SREK1-202ENST00000334121 ERICH2A1L162 156 aa13.63□□□□□ -0.23
SREK1-202ENST00000334121 TRDNQ13061 729 aa13.63□□□□□ -0.23
SREK1-202ENST00000334121 TTLL5Q6EMB2 1281 aa13.63□□□□□ -0.23
SREK1-202ENST00000334121 CGNL1Q0VF96 1302 aa13.63□□□□□ -0.23
SREK1-202ENST00000334121 KIF3AQ9Y496 699 aa13.63□□□□□ -0.23
SREK1-202ENST00000334121 BICD2Q8TD16 824 aa13.63□□□□□ -0.23
SREK1-202ENST00000334121 GGNBP2Q9H3C7 697 aa13.63□□□□□ -0.23
SREK1-202ENST00000334121 ESCO1Q5FWF5 840 aa13.62□□□□□ -0.23
SREK1-202ENST00000334121 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
SREK1-202ENST00000334121 RRP12Q5JTH9 1297 aaKnown RBP13.62□□□□□ -0.23
SREK1-202ENST00000334121 PAF1Q8N7H5 531 aa13.62□□□□□ -0.23
SREK1-202ENST00000334121 DIAPH1O60610 1272 aaKnown RBP13.61□□□□□ -0.23
SREK1-202ENST00000334121 DDX54Q8TDD1 881 aaKnown RBP13.61□□□□□ -0.23
SREK1-202ENST00000334121 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.61□□□□□ -0.23
SREK1-202ENST00000334121 ZKSCAN2Q63HK3 967 aa13.6□□□□□ -0.23
SREK1-202ENST00000334121 PDS5BQ9NTI5 1447 aa13.6□□□□□ -0.23
SREK1-202ENST00000334121 VGFO15240 615 aaPredicted RBP13.6□□□□□ -0.23
SREK1-202ENST00000334121 CCDC144AA2RUR9 1427 aa13.6□□□□□ -0.23
SREK1-202ENST00000334121 PTMSP20962 102 aa13.6□□□□□ -0.23
SREK1-202ENST00000334121 CT47A1Q5JQC4 288 aaPredicted RBP13.6□□□□□ -0.23
SREK1-202ENST00000334121 PHF14O94880 888 aa13.59□□□□□ -0.23
SREK1-202ENST00000334121 DNAJC2Q99543 621 aaKnown RBP13.59□□□□□ -0.23
SREK1-202ENST00000334121 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
SREK1-202ENST00000334121 DDX58O95786 925 aaKnown RBP13.59□□□□□ -0.23
SREK1-202ENST00000334121 LNPKQ9C0E8 428 aa13.59□□□□□ -0.23
SREK1-202ENST00000334121 TPM1P09493 284 aa13.59□□□□□ -0.23
SREK1-202ENST00000334121 XPCQ01831 940 aaPredicted RBP13.59□□□□□ -0.23
SREK1-202ENST00000334121 SMARCA2P51531 1590 aa13.59□□□□□ -0.23
SREK1-202ENST00000334121 CPLX2Q6PUV4 134 aaKnown RBP13.58□□□□□ -0.23
SREK1-202ENST00000334121 PRDM2Q13029 1718 aa13.58□□□□□ -0.24
SREK1-202ENST00000334121 NLRP6P59044 892 aa13.58□□□□□ -0.24
SREK1-202ENST00000334121 ABTB2Q8N961 1025 aa13.58□□□□□ -0.24
SREK1-202ENST00000334121 RBM5P52756 815 aaKnown RBP eCLIP13.58□□□□□ -0.24
SREK1-202ENST00000334121 SF3B2Q13435 895 aaKnown RBP13.58□□□□□ -0.24
SREK1-202ENST00000334121 ODF2Q5BJF6 829 aa13.57□□□□□ -0.24
SREK1-202ENST00000334121 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
SREK1-202ENST00000334121 R3HCC1Q9Y3T6 440 aaKnown RBP13.57□□□□□ -0.24
SREK1-202ENST00000334121 CCDC88BA6NC98 1476 aa13.57□□□□□ -0.24
SREK1-202ENST00000334121 CHMP4BP1P59074 171 aa13.57□□□□□ -0.24
SREK1-202ENST00000334121 ZKSCAN1P17029 563 aaPredicted RBP13.57□□□□□ -0.24
SREK1-202ENST00000334121 HOMER1Q86YM7 354 aa13.56□□□□□ -0.24
SREK1-202ENST00000334121 NACADO15069 1562 aa13.56□□□□□ -0.24
SREK1-202ENST00000334121 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
SREK1-202ENST00000334121 MAP4K4O95819 1239 aaPredicted RBP13.56□□□□□ -0.24
SREK1-202ENST00000334121 OSCARQ8IYS5 282 aa13.55□□□□□ -0.24
SREK1-202ENST00000334121 EPS15P42566 896 aa13.55□□□□□ -0.24
SREK1-202ENST00000334121 RUFY2Q8WXA3 655 aa13.55□□□□□ -0.24
SREK1-202ENST00000334121 C1orf115Q9H7X2 142 aa13.55□□□□□ -0.24
SREK1-202ENST00000334121 FMN1Q68DA7 1419 aa13.55□□□□□ -0.24
SREK1-202ENST00000334121 MYBBP1AQ9BQG0 1328 aaKnown RBP13.55□□□□□ -0.24
SREK1-202ENST00000334121 CEBPZQ03701 1054 aaKnown RBP13.54□□□□□ -0.24
SREK1-202ENST00000334121 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
SREK1-202ENST00000334121 KIF15Q9NS87 1388 aa13.54□□□□□ -0.24
SREK1-202ENST00000334121 PDILTQ8N807 584 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms