RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 SENP3Q9H4L4 574 aaPredicted RBP26.98■■□□□ 1.91
TSSC4-201ENST00000333256 RIMS2Q9UQ26 1411 aa26.96■■□□□ 1.91
TSSC4-201ENST00000333256 NEXMIFQ5QGS0 1516 aa26.95■■□□□ 1.9
TSSC4-201ENST00000333256 ZFYVE9O95405 1425 aa26.94■■□□□ 1.9
TSSC4-201ENST00000333256 RPGRIP1LQ68CZ1 1315 aa26.93■■□□□ 1.9
TSSC4-201ENST00000333256 LTKP29376 864 aa26.93■■□□□ 1.9
TSSC4-201ENST00000333256 SLIT1O75093 1534 aa26.92■■□□□ 1.9
TSSC4-201ENST00000333256 ARHGAP23Q9P227 1491 aa26.92■■□□□ 1.9
TSSC4-201ENST00000333256 TXNDC2Q86VQ3 553 aa26.92■■□□□ 1.9
TSSC4-201ENST00000333256 PPP1R15AO75807 674 aaPredicted RBP26.91■■□□□ 1.9
TSSC4-201ENST00000333256 ADGRF5Q8IZF2 1346 aa26.9■■□□□ 1.9
TSSC4-201ENST00000333256 EID1Q9Y6B2 187 aa26.89■■□□□ 1.9
TSSC4-201ENST00000333256 PPLO60437 1756 aa26.88■■□□□ 1.89
TSSC4-201ENST00000333256 TIMELESSQ9UNS1 1208 aa26.88■■□□□ 1.89
TSSC4-201ENST00000333256 IFT172Q9UG01 1749 aa26.88■■□□□ 1.89
TSSC4-201ENST00000333256 VGFO15240 615 aaPredicted RBP26.87■■□□□ 1.89
TSSC4-201ENST00000333256 ANKLE2Q86XL3 938 aa26.87■■□□□ 1.89
TSSC4-201ENST00000333256 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.87■■□□□ 1.89
TSSC4-201ENST00000333256 HDGFP51858 240 aaKnown RBP26.86■■□□□ 1.89
TSSC4-201ENST00000333256 NCKAP5LQ9HCH0 1330 aa26.86■■□□□ 1.89
TSSC4-201ENST00000333256 SCAF11Q99590 1463 aaKnown RBP26.85■■□□□ 1.89
TSSC4-201ENST00000333256 MYOM2P54296 1465 aa26.83■■□□□ 1.89
TSSC4-201ENST00000333256 BCANQ96GW7 911 aa26.82■■□□□ 1.88
TSSC4-201ENST00000333256 NBPF8Q3BBV2 869 aa26.81■■□□□ 1.88
TSSC4-201ENST00000333256 PRAG1Q86YV5 1406 aa26.79■■□□□ 1.88
TSSC4-201ENST00000333256 STAC3Q96MF2 364 aa26.79■■□□□ 1.88
TSSC4-201ENST00000333256 NRXN1Q9ULB1 1477 aa26.78■■□□□ 1.88
TSSC4-201ENST00000333256 PIK3C2GO75747 1445 aa26.77■■□□□ 1.88
TSSC4-201ENST00000333256 PLEKHG1Q9ULL1 1385 aa26.77■■□□□ 1.88
TSSC4-201ENST00000333256 CFAP70Q5T0N1 1121 aa26.75■■□□□ 1.87
TSSC4-201ENST00000333256 SLC26A8Q96RN1 970 aa26.75■■□□□ 1.87
TSSC4-201ENST00000333256 POLR1AO95602 1720 aaPredicted RBP26.75■■□□□ 1.87
TSSC4-201ENST00000333256 NPHP4O75161 1426 aaPredicted RBP26.74■■□□□ 1.87
TSSC4-201ENST00000333256 STRCQ7RTU9 1775 aa26.72■■□□□ 1.87
TSSC4-201ENST00000333256 ZEB1P37275 1124 aaPredicted RBP26.72■■□□□ 1.87
TSSC4-201ENST00000333256 IQGAP1P46940 1657 aa26.71■■□□□ 1.87
TSSC4-201ENST00000333256 NRXN3Q9Y4C0 1643 aa26.71■■□□□ 1.87
TSSC4-201ENST00000333256 MED14O60244 1454 aa26.71■■□□□ 1.87
TSSC4-201ENST00000333256 SETBP1Q9Y6X0 1596 aa26.7■■□□□ 1.86
TSSC4-201ENST00000333256 ADAMTS13Q76LX8 1427 aa26.7■■□□□ 1.86
TSSC4-201ENST00000333256 NBPF1Q3BBV0 1214 aa26.69■■□□□ 1.86
TSSC4-201ENST00000333256 C14orf93Q9H972 538 aaKnown RBP26.69■■□□□ 1.86
TSSC4-201ENST00000333256 ALKQ9UM73 1620 aa26.67■■□□□ 1.86
TSSC4-201ENST00000333256 TMEM132EQ6IEE7 984 aa26.66■■□□□ 1.86
TSSC4-201ENST00000333256 METP08581 1390 aa26.64■■□□□ 1.85
TSSC4-201ENST00000333256 TRPM1Q7Z4N2 1603 aa26.63■■□□□ 1.85
TSSC4-201ENST00000333256 TBX22Q9Y458 520 aa26.63■■□□□ 1.85
TSSC4-201ENST00000333256 ROCK2O75116 1388 aaKnown RBP26.62■■□□□ 1.85
TSSC4-201ENST00000333256 RALGAPBQ86X10 1494 aa26.61■■□□□ 1.85
TSSC4-201ENST00000333256 ASXL1Q8IXJ9 1541 aa26.6■■□□□ 1.85
TSSC4-201ENST00000333256 LAMC1P11047 1609 aa26.6■■□□□ 1.85
TSSC4-201ENST00000333256 SETD1AO15047 1707 aaKnown RBP26.6■■□□□ 1.85
TSSC4-201ENST00000333256 DIP2AQ14689 1571 aa26.58■■□□□ 1.85
TSSC4-201ENST00000333256 STK26Q9P289 416 aa26.57■■□□□ 1.84
TSSC4-201ENST00000333256 ADGRB1O14514 1584 aa26.57■■□□□ 1.84
TSSC4-201ENST00000333256 KIAA1210Q9ULL0 1709 aa26.57■■□□□ 1.84
TSSC4-201ENST00000333256 CARD11Q9BXL7 1154 aa26.57■■□□□ 1.84
TSSC4-201ENST00000333256 DMRT2Q9Y5R5 561 aa26.56■■□□□ 1.84
TSSC4-201ENST00000333256 PTPRUQ92729 1446 aa26.54■■□□□ 1.84
TSSC4-201ENST00000333256 GPRASP1Q5JY77 1395 aa26.53■■□□□ 1.84
TSSC4-201ENST00000333256 YTHDC2Q9H6S0 1430 aaKnown RBP26.52■■□□□ 1.84
TSSC4-201ENST00000333256 TRAK1Q9UPV9 953 aa26.52■■□□□ 1.84
TSSC4-201ENST00000333256 AMOTL2Q9Y2J4 779 aa26.5■■□□□ 1.83
TSSC4-201ENST00000333256 LRPPRCP42704 1394 aaKnown RBP26.49■■□□□ 1.83
TSSC4-201ENST00000333256 PIK3R4Q99570 1358 aa26.48■■□□□ 1.83
TSSC4-201ENST00000333256 ZNF335Q9H4Z2 1342 aaPredicted RBP26.48■■□□□ 1.83
TSSC4-201ENST00000333256 KCNA6P17658 529 aa26.47■■□□□ 1.83
TSSC4-201ENST00000333256 ABCC11Q96J66 1382 aa26.44■■□□□ 1.82
TSSC4-201ENST00000333256 USP47Q96K76 1375 aa26.43■■□□□ 1.82
TSSC4-201ENST00000333256 ROBO2Q9HCK4 1378 aa26.43■■□□□ 1.82
TSSC4-201ENST00000333256 CHD2O14647 1828 aaKnown RBP26.42■■□□□ 1.82
TSSC4-201ENST00000333256 SAFB2Q14151 953 aaKnown RBP eCLIP26.41■■□□□ 1.82
TSSC4-201ENST00000333256 WAPLQ7Z5K2 1190 aa26.41■■□□□ 1.82
TSSC4-201ENST00000333256 RBM33Q96EV2 1170 aaKnown RBP26.41■■□□□ 1.82
TSSC4-201ENST00000333256 XRN1Q8IZH2 1706 aaKnown RBP26.41■■□□□ 1.82
TSSC4-201ENST00000333256 PRAM1Q96QH2 718 aa26.4■■□□□ 1.82
TSSC4-201ENST00000333256 HIRIP3Q9BW71 556 aaPredicted RBP26.4■■□□□ 1.82
TSSC4-201ENST00000333256 STRCP1A6NGW2 1772 aa26.39■■□□□ 1.82
TSSC4-201ENST00000333256 TECPR2O15040 1411 aa26.39■■□□□ 1.82
TSSC4-201ENST00000333256 PLEKHH1Q9ULM0 1364 aa26.39■■□□□ 1.82
TSSC4-201ENST00000333256 NWD1Q149M9 1564 aa26.39■■□□□ 1.81
TSSC4-201ENST00000333256 EIF4G2P78344 907 aaKnown RBP eCLIP26.38■■□□□ 1.81
TSSC4-201ENST00000333256 HSPA5P11021 654 aaKnown RBP26.37■■□□□ 1.81
TSSC4-201ENST00000333256 POGKQ9P215 609 aa26.37■■□□□ 1.81
TSSC4-201ENST00000333256 CPS1P31327 1500 aa26.37■■□□□ 1.81
TSSC4-201ENST00000333256 ST20-MTHFSA0A0A6YYL1 179 aa26.36■■□□□ 1.81
TSSC4-201ENST00000333256 ARHGEF28Q8N1W1 1705 aaKnown RBP26.36■■□□□ 1.81
TSSC4-201ENST00000333256 PTCH1Q13635 1447 aa26.36■■□□□ 1.81
TSSC4-201ENST00000333256 KNDC1Q76NI1 1749 aa26.35■■□□□ 1.81
TSSC4-201ENST00000333256 EIF3AQ14152 1382 aaKnown RBP26.35■■□□□ 1.81
TSSC4-201ENST00000333256 DLC1Q96QB1 1528 aa26.35■■□□□ 1.81
TSSC4-201ENST00000333256 PROSER2Q86WR7 435 aaPredicted RBP26.34■■□□□ 1.81
TSSC4-201ENST00000333256 CENPJQ9HC77 1338 aaPredicted RBP26.34■■□□□ 1.81
TSSC4-201ENST00000333256 NKTRP30414 1462 aaKnown RBP26.33■■□□□ 1.8
TSSC4-201ENST00000333256 FAM135BQ49AJ0 1406 aa26.32■■□□□ 1.8
TSSC4-201ENST00000333256 SIRT1Q96EB6 747 aa26.31■■□□□ 1.8
TSSC4-201ENST00000333256 MINK1Q8N4C8 1332 aaPredicted RBP26.3■■□□□ 1.8
TSSC4-201ENST00000333256 TMEM94Q12767 1356 aa26.29■■□□□ 1.8
TSSC4-201ENST00000333256 C14orf37Q86TY3 774 aa26.27■■□□□ 1.8
TSSC4-201ENST00000333256 LRRC7Q96NW7 1537 aa26.26■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms