RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 MTMR7Q9Y216 660 aa17.21■□□□□ 0.35
PCM1-201ENST00000325083 EPS15P42566 896 aa17.21■□□□□ 0.35
PCM1-201ENST00000325083 TTLL5Q6EMB2 1281 aa17.21■□□□□ 0.35
PCM1-201ENST00000325083 C9orf78Q9NZ63 289 aaPredicted RBP17.21■□□□□ 0.35
PCM1-201ENST00000325083 MEX3CQ5U5Q3 659 aaKnown RBP17.21■□□□□ 0.35
PCM1-201ENST00000325083 MPHOSPH9Q99550 1183 aa17.21■□□□□ 0.35
PCM1-201ENST00000325083 NUP155O75694 1391 aa17.21■□□□□ 0.35
PCM1-201ENST00000325083 ERICH2A1L162 156 aa17.2■□□□□ 0.34
PCM1-201ENST00000325083 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
PCM1-201ENST00000325083 CPLX2Q6PUV4 134 aaKnown RBP17.19■□□□□ 0.34
PCM1-201ENST00000325083 SASS6Q6UVJ0 657 aa17.19■□□□□ 0.34
PCM1-201ENST00000325083 GSE1Q14687 1217 aa17.19■□□□□ 0.34
PCM1-201ENST00000325083 IFIT2P09913 472 aaKnown RBP17.19■□□□□ 0.34
PCM1-201ENST00000325083 PDILTQ8N807 584 aa17.19■□□□□ 0.34
PCM1-201ENST00000325083 CRBNQ96SW2 442 aa17.18■□□□□ 0.34
PCM1-201ENST00000325083 TTC5Q8N0Z6 440 aa17.18■□□□□ 0.34
PCM1-201ENST00000325083 FAM161AQ3B820 660 aa17.18■□□□□ 0.34
PCM1-201ENST00000325083 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.18■□□□□ 0.34
PCM1-201ENST00000325083 LRRFIP1Q32MZ4 808 aaKnown RBP17.18■□□□□ 0.34
PCM1-201ENST00000325083 CHMP4CQ96CF2 233 aa17.18■□□□□ 0.34
PCM1-201ENST00000325083 VPS37CA5D8V6 355 aaPredicted RBP17.17■□□□□ 0.34
PCM1-201ENST00000325083 RUFY2Q8WXA3 655 aa17.17■□□□□ 0.34
PCM1-201ENST00000325083 IFT57Q9NWB7 429 aa17.17■□□□□ 0.34
PCM1-201ENST00000325083 CAGE1Q8TC20 777 aa17.17■□□□□ 0.34
PCM1-201ENST00000325083 TRDNQ13061 729 aa17.17■□□□□ 0.34
PCM1-201ENST00000325083 CENPQQ7L2Z9 268 aaPredicted RBP17.16■□□□□ 0.34
PCM1-201ENST00000325083 KIF3BO15066 747 aa17.16■□□□□ 0.34
PCM1-201ENST00000325083 PLCD4Q9BRC7 762 aa17.16■□□□□ 0.34
PCM1-201ENST00000325083 NEXNQ0ZGT2 675 aa17.16■□□□□ 0.34
PCM1-201ENST00000325083 MNS1Q8NEH6 495 aa17.15■□□□□ 0.34
PCM1-201ENST00000325083 CCDC27Q2M243 656 aa17.15■□□□□ 0.34
PCM1-201ENST00000325083 CDR1P51861 262 aa17.15■□□□□ 0.34
PCM1-201ENST00000325083 NOM1Q5C9Z4 860 aaKnown RBP17.15■□□□□ 0.34
PCM1-201ENST00000325083 ZKSCAN1P17029 563 aaPredicted RBP17.14■□□□□ 0.33
PCM1-201ENST00000325083 TMEM132AQ24JP5 1023 aa17.14■□□□□ 0.33
PCM1-201ENST00000325083 HNRNPMP52272 730 aaKnown RBP eCLIP17.14■□□□□ 0.337e-7■■■■□ 20.8
PCM1-201ENST00000325083 PDE4AP27815 886 aa17.14■□□□□ 0.33
PCM1-201ENST00000325083 TEFQ10587 303 aa17.13■□□□□ 0.33
PCM1-201ENST00000325083 RB1CC1Q8TDY2 1594 aa17.13■□□□□ 0.33
PCM1-201ENST00000325083 COG6Q9Y2V7 657 aa17.13■□□□□ 0.33
PCM1-201ENST00000325083 R3HCC1Q9Y3T6 440 aaKnown RBP17.13■□□□□ 0.33
PCM1-201ENST00000325083 DHX37Q8IY37 1157 aaKnown RBP17.12■□□□□ 0.33
PCM1-201ENST00000325083 COG3Q96JB2 828 aa17.12■□□□□ 0.33
PCM1-201ENST00000325083 ZKSCAN2Q63HK3 967 aa17.11■□□□□ 0.33
PCM1-201ENST00000325083 EXOC6Q8TAG9 804 aa17.11■□□□□ 0.33
PCM1-201ENST00000325083 SMC3Q9UQE7 1217 aa17.11■□□□□ 0.33
PCM1-201ENST00000325083 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
PCM1-201ENST00000325083 ACBD3Q9H3P7 528 aa17.11■□□□□ 0.33
PCM1-201ENST00000325083 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
PCM1-201ENST00000325083 CUX2O14529 1486 aa17.1■□□□□ 0.33
PCM1-201ENST00000325083 OLFM4Q6UX06 510 aa17.1■□□□□ 0.33
PCM1-201ENST00000325083 PAF1Q8N7H5 531 aa17.1■□□□□ 0.33
PCM1-201ENST00000325083 PANK3Q9H999 370 aa17.1■□□□□ 0.33
PCM1-201ENST00000325083 IKQ13123 557 aaPredicted RBP17.1■□□□□ 0.33
PCM1-201ENST00000325083 ARGLU1Q9NWB6 273 aaPredicted RBP17.09■□□□□ 0.33
PCM1-201ENST00000325083 RAB3GAP2Q9H2M9 1393 aa17.09■□□□□ 0.33
PCM1-201ENST00000325083 KIF15Q9NS87 1388 aa17.09■□□□□ 0.33
PCM1-201ENST00000325083 G3BP1Q13283 466 aaKnown RBP eCLIP17.08■□□□□ 0.33
PCM1-201ENST00000325083 CARMIL1Q5VZK9 1371 aa17.08■□□□□ 0.33
PCM1-201ENST00000325083 SAFBQ15424 915 aaKnown RBP eCLIP17.08■□□□□ 0.33
PCM1-201ENST00000325083 OFD1O75665 1012 aa17.08■□□□□ 0.32
PCM1-201ENST00000325083 RNF20Q5VTR2 975 aa17.08■□□□□ 0.32
PCM1-201ENST00000325083 H0YHG0 523 aa17.08■□□□□ 0.32
PCM1-201ENST00000325083 REC8O95072 547 aa17.08■□□□□ 0.32
PCM1-201ENST00000325083 CGNL1Q0VF96 1302 aa17.08■□□□□ 0.32
PCM1-201ENST00000325083 ANKRD30AQ9BXX3 1397 aa17.07■□□□□ 0.32
PCM1-201ENST00000325083 NLRP13Q86W25 1043 aa17.07■□□□□ 0.32
PCM1-201ENST00000325083 HSP90B2PQ58FF3 399 aa17.07■□□□□ 0.32
PCM1-201ENST00000325083 CCDC173Q0VFZ6 552 aa17.07■□□□□ 0.32
PCM1-201ENST00000325083 CCDC191Q8NCU4 936 aa17.07■□□□□ 0.32
PCM1-201ENST00000325083 PHF23Q9BUL5 403 aaPredicted RBP17.06■□□□□ 0.32
PCM1-201ENST00000325083 WASHC4Q2M389 1173 aa17.06■□□□□ 0.32
PCM1-201ENST00000325083 NEUROD6Q96NK8 337 aa17.06■□□□□ 0.32
PCM1-201ENST00000325083 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.05■□□□□ 0.32
PCM1-201ENST00000325083 PDE3BQ13370 1112 aa17.05■□□□□ 0.32
PCM1-201ENST00000325083 CCDC73Q6ZRK6 1079 aa17.05■□□□□ 0.32
PCM1-201ENST00000325083 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
PCM1-201ENST00000325083 RRP1P56182 461 aaKnown RBP17.05■□□□□ 0.32
PCM1-201ENST00000325083 RDXP35241 583 aaKnown RBP17.04■□□□□ 0.32
PCM1-201ENST00000325083 BRMS1Q9HCU9 246 aa17.04■□□□□ 0.32
PCM1-201ENST00000325083 BRPF1P55201 1214 aaPredicted RBP17.04■□□□□ 0.32
PCM1-201ENST00000325083 AIMP1Q12904 312 aaKnown RBP17.04■□□□□ 0.32
PCM1-201ENST00000325083 DCTN1Q14203 1278 aa17.04■□□□□ 0.32
PCM1-201ENST00000325083 KANK4Q5T7N3 995 aaPredicted RBP17.04■□□□□ 0.32
PCM1-201ENST00000325083 NEFHP12036 1026 aa17.03■□□□□ 0.32
PCM1-201ENST00000325083 ANKRD62A6NC57 917 aa17.03■□□□□ 0.32
PCM1-201ENST00000325083 PHLDB1Q86UU1 1377 aa17.03■□□□□ 0.32
PCM1-201ENST00000325083 WWC2Q6AWC2 1192 aa17.03■□□□□ 0.32
PCM1-201ENST00000325083 DDX58O95786 925 aaKnown RBP17.03■□□□□ 0.32
PCM1-201ENST00000325083 E9PSI1 815 aa17.03■□□□□ 0.32
PCM1-201ENST00000325083 SMC2O95347 1197 aa17.02■□□□□ 0.32
PCM1-201ENST00000325083 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.31
PCM1-201ENST00000325083 MINK1Q8N4C8 1332 aaPredicted RBP17.01■□□□□ 0.31
PCM1-201ENST00000325083 INTS3Q68E01 1043 aaKnown RBP17.01■□□□□ 0.31
PCM1-201ENST00000325083 RALYLQ86SE5 291 aaKnown RBP17.01■□□□□ 0.31
PCM1-201ENST00000325083 FAM43AQ8N2R8 423 aa17.01■□□□□ 0.31
PCM1-201ENST00000325083 MYO6Q9UM54 1294 aa17.01■□□□□ 0.31
PCM1-201ENST00000325083 EFCAB2Q5VUJ9 269 aa17.01■□□□□ 0.31
PCM1-201ENST00000325083 CARMIL2Q6F5E8 1435 aa17.01■□□□□ 0.31
PCM1-201ENST00000325083 RIC3Q7Z5B4 369 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms