RNA–Protein interactions for RNA: ENST00000316084.9

RPS4X-201, Transcript of ribosomal protein S4 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS4X, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4X-201ENST00000316084 SLIT1O75093 1534 aa12.85□□□□□ -0.35
RPS4X-201ENST00000316084 SPHKAPQ2M3C7 1700 aa12.85□□□□□ -0.35
RPS4X-201ENST00000316084 PNPLA6Q8IY17 1366 aa12.85□□□□□ -0.35
RPS4X-201ENST00000316084 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
RPS4X-201ENST00000316084 COL13A1Q5TAT6 717 aaPredicted RBP12.84□□□□□ -0.35
RPS4X-201ENST00000316084 INO80Q9ULG1 1556 aaPredicted RBP12.84□□□□□ -0.35
RPS4X-201ENST00000316084 CEP162Q5TB80 1403 aa12.83□□□□□ -0.36
RPS4X-201ENST00000316084 BRINP3Q76B58 766 aa12.83□□□□□ -0.36
RPS4X-201ENST00000316084 LRRC59Q96AG4 307 aaKnown RBP12.82□□□□□ -0.36
RPS4X-201ENST00000316084 EN1Q05925 392 aaPredicted RBP12.81□□□□□ -0.36
RPS4X-201ENST00000316084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.365e-16■□□□□ 8.3
RPS4X-201ENST00000316084 RALGAPBQ86X10 1494 aa12.81□□□□□ -0.36
RPS4X-201ENST00000316084 GJD4Q96KN9 370 aaPredicted RBP12.8□□□□□ -0.36
RPS4X-201ENST00000316084 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.8□□□□□ -0.36
RPS4X-201ENST00000316084 CAMSAP2Q08AD1 1489 aa12.79□□□□□ -0.36
RPS4X-201ENST00000316084 MROH1Q8NDA8 1641 aa12.79□□□□□ -0.36
RPS4X-201ENST00000316084 SLC26A8Q96RN1 970 aa12.79□□□□□ -0.36
RPS4X-201ENST00000316084 EID1Q9Y6B2 187 aa12.79□□□□□ -0.36
RPS4X-201ENST00000316084 TNS4Q8IZW8 715 aa12.78□□□□□ -0.36
RPS4X-201ENST00000316084 WASHC2CQ9Y4E1 1318 aa12.77□□□□□ -0.37
RPS4X-201ENST00000316084 CADPS2Q86UW7 1296 aa12.77□□□□□ -0.37
RPS4X-201ENST00000316084 TET3O43151 1660 aa12.77□□□□□ -0.37
RPS4X-201ENST00000316084 ASXL1Q8IXJ9 1541 aa12.76□□□□□ -0.37
RPS4X-201ENST00000316084 SYCP2Q9BX26 1530 aa12.76□□□□□ -0.37
RPS4X-201ENST00000316084 HSPA6P17066 643 aa12.76□□□□□ -0.37
RPS4X-201ENST00000316084 CCER1Q8TC90 406 aaPredicted RBP12.76□□□□□ -0.37
RPS4X-201ENST00000316084 GLI3P10071 1580 aa12.76□□□□□ -0.37
RPS4X-201ENST00000316084 GPATCH8Q9UKJ3 1502 aaKnown RBP12.75□□□□□ -0.37
RPS4X-201ENST00000316084 TROQ12816 1431 aaPredicted RBP12.75□□□□□ -0.37
RPS4X-201ENST00000316084 SPON1Q9HCB6 807 aa12.74□□□□□ -0.37
RPS4X-201ENST00000316084 PRXQ9BXM0 1461 aa12.74□□□□□ -0.37
RPS4X-201ENST00000316084 PTCH1Q13635 1447 aa12.74□□□□□ -0.37
RPS4X-201ENST00000316084 ATF3P18847 181 aa12.73□□□□□ -0.37
RPS4X-201ENST00000316084 C14orf37Q86TY3 774 aa12.72□□□□□ -0.37
RPS4X-201ENST00000316084 ERVK-7P63135 1459 aa12.72□□□□□ -0.37
RPS4X-201ENST00000316084 RGPD1P0DJD0 1748 aa12.72□□□□□ -0.37
RPS4X-201ENST00000316084 NCOA3Q9Y6Q9 1424 aa12.72□□□□□ -0.37
RPS4X-201ENST00000316084 HNRNPMP52272 730 aaKnown RBP eCLIP12.72□□□□□ -0.37
RPS4X-201ENST00000316084 CDK11AQ9UQ88 783 aaPredicted RBP12.72□□□□□ -0.37
RPS4X-201ENST00000316084 CHD2O14647 1828 aaKnown RBP12.72□□□□□ -0.37
RPS4X-201ENST00000316084 ARHGAP35Q9NRY4 1499 aa12.71□□□□□ -0.37
RPS4X-201ENST00000316084 KCNQ2O43526 872 aa12.71□□□□□ -0.38
RPS4X-201ENST00000316084 CDC42BPAQ5VT25 1732 aa12.71□□□□□ -0.38
RPS4X-201ENST00000316084 CLIP1P30622 1438 aa12.7□□□□□ -0.38
RPS4X-201ENST00000316084 CSRNP3Q8WYN3 585 aa12.7□□□□□ -0.38
RPS4X-201ENST00000316084 KIF3BO15066 747 aa12.69□□□□□ -0.38
RPS4X-201ENST00000316084 RANGAP1P46060 587 aaPredicted RBP12.69□□□□□ -0.38
RPS4X-201ENST00000316084 EZH2Q15910 746 aaKnown RBP12.69□□□□□ -0.38
RPS4X-201ENST00000316084 SEPT12Q8IYM1 358 aa12.69□□□□□ -0.38
RPS4X-201ENST00000316084 DDX17Q92841 729 aaKnown RBP12.69□□□□□ -0.38
RPS4X-201ENST00000316084 C19orf44Q9H6X5 657 aa12.69□□□□□ -0.38
RPS4X-201ENST00000316084 SHANK3Q9BYB0 1731 aa12.69□□□□□ -0.38
RPS4X-201ENST00000316084 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.69□□□□□ -0.38
RPS4X-201ENST00000316084 TMEM2Q9UHN6 1383 aa12.68□□□□□ -0.38
RPS4X-201ENST00000316084 ZNF777Q9ULD5 760 aaPredicted RBP12.68□□□□□ -0.38
RPS4X-201ENST00000316084 CFAP65Q6ZU64 1925 aaKnown RBP12.68□□□□□ -0.38
RPS4X-201ENST00000316084 KRT27Q7Z3Y8 459 aa12.67□□□□□ -0.38
RPS4X-201ENST00000316084 DHX29Q7Z478 1369 aaKnown RBP12.67□□□□□ -0.38
RPS4X-201ENST00000316084 DISP2A7MBM2 1401 aa12.66□□□□□ -0.38
RPS4X-201ENST00000316084 TNS1Q9HBL0 1735 aaKnown RBP12.66□□□□□ -0.38
RPS4X-201ENST00000316084 MARF1Q9Y4F3 1742 aaKnown RBP12.66□□□□□ -0.38
RPS4X-201ENST00000316084 ACIN1Q9UKV3 1341 aaKnown RBP12.65□□□□□ -0.38
RPS4X-201ENST00000316084 NRKQ7Z2Y5 1582 aa12.64□□□□□ -0.39
RPS4X-201ENST00000316084 CENPBP07199 599 aaPredicted RBP12.63□□□□□ -0.39
RPS4X-201ENST00000316084 ATP1B4Q9UN42 357 aaPredicted RBP12.63□□□□□ -0.39
RPS4X-201ENST00000316084 DIEXFQ68CQ4 756 aaKnown RBP12.62□□□□□ -0.39
RPS4X-201ENST00000316084 PIK3C2BO00750 1634 aa12.61□□□□□ -0.39
RPS4X-201ENST00000316084 FAM83GA6ND36 823 aa12.61□□□□□ -0.39
RPS4X-201ENST00000316084 CAMKK2Q96RR4 588 aa12.61□□□□□ -0.39
RPS4X-201ENST00000316084 MYOM1P52179 1685 aa12.6□□□□□ -0.39
RPS4X-201ENST00000316084 MST1RQ04912 1400 aa12.6□□□□□ -0.39
RPS4X-201ENST00000316084 COL22A1Q8NFW1 1626 aaPredicted RBP12.6□□□□□ -0.39
RPS4X-201ENST00000316084 NUP188Q5SRE5 1749 aa12.59□□□□□ -0.39
RPS4X-201ENST00000316084 DNAJC5GQ8N7S2 189 aa12.59□□□□□ -0.39
RPS4X-201ENST00000316084 KIAA1107Q9UPP5 1409 aa12.59□□□□□ -0.39
RPS4X-201ENST00000316084 RREB1Q92766 1687 aa12.59□□□□□ -0.39
RPS4X-201ENST00000316084 UNC5CLQ8IV45 518 aa12.58□□□□□ -0.4
RPS4X-201ENST00000316084 VPS8Q8N3P4 1428 aa12.57□□□□□ -0.4
RPS4X-201ENST00000316084 UBTFP17480 764 aaKnown RBP12.57□□□□□ -0.4
RPS4X-201ENST00000316084 BCANQ96GW7 911 aa12.57□□□□□ -0.4
RPS4X-201ENST00000316084 ONECUT3O60422 494 aaPredicted RBP12.57□□□□□ -0.4
RPS4X-201ENST00000316084 WWC3Q9ULE0 1092 aa12.57□□□□□ -0.4
RPS4X-201ENST00000316084 SYT17Q9BSW7 474 aa12.56□□□□□ -0.4
RPS4X-201ENST00000316084 MYOM2P54296 1465 aa12.55□□□□□ -0.4
RPS4X-201ENST00000316084 DCCP43146 1447 aa12.55□□□□□ -0.4
RPS4X-201ENST00000316084 LRRIQ1Q96JM4 1722 aa12.55□□□□□ -0.4
RPS4X-201ENST00000316084 PPP1R15AO75807 674 aaPredicted RBP12.55□□□□□ -0.4
RPS4X-201ENST00000316084 NBPF8Q3BBV2 869 aa12.55□□□□□ -0.4
RPS4X-201ENST00000316084 NBPF14Q5TI25 921 aa12.55□□□□□ -0.4
RPS4X-201ENST00000316084 EFCAB6Q5THR3 1501 aa12.55□□□□□ -0.4
RPS4X-201ENST00000316084 ADGRB2O60241 1585 aa12.54□□□□□ -0.4
RPS4X-201ENST00000316084 SLIT2O94813 1529 aa12.54□□□□□ -0.4
RPS4X-201ENST00000316084 PLEKHH2Q8IVE3 1493 aa12.54□□□□□ -0.4
RPS4X-201ENST00000316084 ZNF316A6NFI3 1004 aaPredicted RBP12.53□□□□□ -0.4
RPS4X-201ENST00000316084 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
RPS4X-201ENST00000316084 LAMC1P11047 1609 aa12.53□□□□□ -0.4
RPS4X-201ENST00000316084 PARD3Q8TEW0 1356 aa12.53□□□□□ -0.4
RPS4X-201ENST00000316084 FHDC1Q9C0D6 1143 aaPredicted RBP12.52□□□□□ -0.4
RPS4X-201ENST00000316084 APLP1P51693 650 aa12.52□□□□□ -0.41
RPS4X-201ENST00000316084 NEUROD1Q13562 356 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms