RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 RSPH6AQ9H0K4 717 aa25.64■■□□□ 1.69
KDM3B-201ENST00000314358 JPH4Q96JJ6 628 aa25.63■■□□□ 1.69
KDM3B-201ENST00000314358 NAP1L1P55209 391 aaKnown RBP25.63■■□□□ 1.69
KDM3B-201ENST00000314358 GPS2Q13227 327 aa25.63■■□□□ 1.69
KDM3B-201ENST00000314358 TRIM34Q9BYJ4 488 aa25.63■■□□□ 1.69
KDM3B-201ENST00000314358 CTDP1Q9Y5B0 961 aaPredicted RBP25.62■■□□□ 1.69
KDM3B-201ENST00000314358 KRI1Q8N9T8 703 aaKnown RBP25.62■■□□□ 1.69
KDM3B-201ENST00000314358 TRIM29Q14134 588 aa25.62■■□□□ 1.69
KDM3B-201ENST00000314358 L3MBTL2Q969R5 705 aa25.62■■□□□ 1.69
KDM3B-201ENST00000314358 LMOD3Q0VAK6 560 aa25.62■■□□□ 1.69
KDM3B-201ENST00000314358 PANK3Q9H999 370 aa25.6■■□□□ 1.69
KDM3B-201ENST00000314358 SYTL4Q96C24 671 aaPredicted RBP25.6■■□□□ 1.69
KDM3B-201ENST00000314358 VPS37CA5D8V6 355 aaPredicted RBP25.59■■□□□ 1.69
KDM3B-201ENST00000314358 SKIDA1Q1XH10 827 aa25.59■■□□□ 1.69
KDM3B-201ENST00000314358 RSPH4AQ5TD94 716 aa25.59■■□□□ 1.69
KDM3B-201ENST00000314358 C1orf141Q5JVX7 400 aa25.59■■□□□ 1.69
KDM3B-201ENST00000314358 CYB5RLQ6IPT4 315 aa25.59■■□□□ 1.69
KDM3B-201ENST00000314358 NLRP13Q86W25 1043 aa25.59■■□□□ 1.69
KDM3B-201ENST00000314358 MTMR7Q9Y216 660 aa25.58■■□□□ 1.69
KDM3B-201ENST00000314358 EVA1CP58658 441 aa25.58■■□□□ 1.69
KDM3B-201ENST00000314358 CHMP4AQ9BY43 222 aa25.58■■□□□ 1.69
KDM3B-201ENST00000314358 CENPQQ7L2Z9 268 aaPredicted RBP25.57■■□□□ 1.68
KDM3B-201ENST00000314358 C9orf78Q9NZ63 289 aaPredicted RBP25.57■■□□□ 1.68
KDM3B-201ENST00000314358 NFXL1Q6ZNB6 911 aa25.57■■□□□ 1.68
KDM3B-201ENST00000314358 SMARCA4P51532 1647 aa25.57■■□□□ 1.68
KDM3B-201ENST00000314358 FANCD2Q9BXW9 1451 aa25.57■■□□□ 1.68
KDM3B-201ENST00000314358 ATP6V1DQ9Y5K8 247 aa25.56■■□□□ 1.68
KDM3B-201ENST00000314358 CPLX1O14810 134 aa25.56■■□□□ 1.68
KDM3B-201ENST00000314358 FYB1O15117 783 aa25.56■■□□□ 1.68
KDM3B-201ENST00000314358 AEBP2Q6ZN18 517 aaPredicted RBP25.56■■□□□ 1.68
KDM3B-201ENST00000314358 IPO7O95373 1038 aaKnown RBP25.56■■□□□ 1.68
KDM3B-201ENST00000314358 TTLL5Q6EMB2 1281 aa25.56■■□□□ 1.68
KDM3B-201ENST00000314358 MEX3CQ5U5Q3 659 aaKnown RBP25.55■■□□□ 1.68
KDM3B-201ENST00000314358 RRP12Q5JTH9 1297 aaKnown RBP25.54■■□□□ 1.68
KDM3B-201ENST00000314358 NOL10Q9BSC4 688 aaKnown RBP25.54■■□□□ 1.68
KDM3B-201ENST00000314358 ZKSCAN2Q63HK3 967 aa25.53■■□□□ 1.68
KDM3B-201ENST00000314358 VPS37DQ86XT2 251 aa25.53■■□□□ 1.68
KDM3B-201ENST00000314358 CALRP27797 417 aaKnown RBP25.53■■□□□ 1.68
KDM3B-201ENST00000314358 SKOR2Q2VWA4 1001 aaPredicted RBP25.52■■□□□ 1.68
KDM3B-201ENST00000314358 KLHL34Q8N239 644 aa25.52■■□□□ 1.68
KDM3B-201ENST00000314358 IFIT2P09913 472 aaKnown RBP25.52■■□□□ 1.68
KDM3B-201ENST00000314358 IFT57Q9NWB7 429 aa25.52■■□□□ 1.68
KDM3B-201ENST00000314358 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.51■■□□□ 1.671e-8■■■■■ 38.5
KDM3B-201ENST00000314358 RRP1P56182 461 aaKnown RBP25.51■■□□□ 1.67
KDM3B-201ENST00000314358 AMOTL1Q8IY63 956 aa25.5■■□□□ 1.67
KDM3B-201ENST00000314358 TEFQ10587 303 aa25.5■■□□□ 1.67
KDM3B-201ENST00000314358 TEX35Q5T0J7 233 aa25.49■■□□□ 1.67
KDM3B-201ENST00000314358 ST20-MTHFSA0A0A6YYL1 179 aa25.49■■□□□ 1.67
KDM3B-201ENST00000314358 RUFY1Q96T51 708 aa25.48■■□□□ 1.67
KDM3B-201ENST00000314358 ANKRD20A12PQ8NF67 263 aa25.48■■□□□ 1.67
KDM3B-201ENST00000314358 ZKSCAN1P17029 563 aaPredicted RBP25.48■■□□□ 1.67
KDM3B-201ENST00000314358 TTC5Q8N0Z6 440 aa25.48■■□□□ 1.67
KDM3B-201ENST00000314358 CPLX2Q6PUV4 134 aaKnown RBP25.47■■□□□ 1.67
KDM3B-201ENST00000314358 ZFYVE27Q5T4F4 411 aa25.47■■□□□ 1.67
KDM3B-201ENST00000314358 PDILTQ8N807 584 aa25.47■■□□□ 1.67
KDM3B-201ENST00000314358 SASS6Q6UVJ0 657 aa25.46■■□□□ 1.67
KDM3B-201ENST00000314358 CT47A1Q5JQC4 288 aaPredicted RBP25.46■■□□□ 1.67
KDM3B-201ENST00000314358 CCDC47Q96A33 483 aaKnown RBP25.46■■□□□ 1.67
KDM3B-201ENST00000314358 CCDC43Q96MW1 224 aaKnown RBP25.46■■□□□ 1.67
KDM3B-201ENST00000314358 COG3Q96JB2 828 aa25.46■■□□□ 1.67
KDM3B-201ENST00000314358 APAF1O14727 1248 aa25.46■■□□□ 1.67
KDM3B-201ENST00000314358 PDE3BQ13370 1112 aa25.46■■□□□ 1.67
KDM3B-201ENST00000314358 MYBBP1AQ9BQG0 1328 aaKnown RBP25.45■■□□□ 1.66
KDM3B-201ENST00000314358 NEXNQ0ZGT2 675 aa25.45■■□□□ 1.66
KDM3B-201ENST00000314358 DHX37Q8IY37 1157 aaKnown RBP25.45■■□□□ 1.66
KDM3B-201ENST00000314358 MINK1Q8N4C8 1332 aaPredicted RBP25.44■■□□□ 1.66
KDM3B-201ENST00000314358 RUFY2Q8WXA3 655 aa25.43■■□□□ 1.66
KDM3B-201ENST00000314358 KIF15Q9NS87 1388 aa25.43■■□□□ 1.66
KDM3B-201ENST00000314358 SMC3Q9UQE7 1217 aa25.43■■□□□ 1.66
KDM3B-201ENST00000314358 MNS1Q8NEH6 495 aa25.43■■□□□ 1.66
KDM3B-201ENST00000314358 PTPRGP23470 1445 aa25.43■■□□□ 1.66
KDM3B-201ENST00000314358 CWC22Q9HCG8 908 aaKnown RBP25.43■■□□□ 1.66
KDM3B-201ENST00000314358 TRDNQ13061 729 aa25.42■■□□□ 1.66
KDM3B-201ENST00000314358 RNF214Q8ND24 703 aa25.42■■□□□ 1.66
KDM3B-201ENST00000314358 R3HCC1Q9Y3T6 440 aaKnown RBP25.42■■□□□ 1.66
KDM3B-201ENST00000314358 CCDC27Q2M243 656 aa25.41■■□□□ 1.66
KDM3B-201ENST00000314358 ODF2Q5BJF6 829 aa25.41■■□□□ 1.66
KDM3B-201ENST00000314358 LNPKQ9C0E8 428 aa25.4■■□□□ 1.66
KDM3B-201ENST00000314358 ZNF428Q96B54 188 aa25.4■■□□□ 1.66
KDM3B-201ENST00000314358 ERICH2A1L162 156 aa25.39■■□□□ 1.66
KDM3B-201ENST00000314358 REC8O95072 547 aa25.39■■□□□ 1.66
KDM3B-201ENST00000314358 AIMP1Q12904 312 aaKnown RBP25.39■■□□□ 1.66
KDM3B-201ENST00000314358 FKBP5Q13451 457 aaPredicted RBP25.39■■□□□ 1.66
KDM3B-201ENST00000314358 E9PSI1 815 aa25.39■■□□□ 1.65
KDM3B-201ENST00000314358 NEUROD6Q96NK8 337 aa25.38■■□□□ 1.65
KDM3B-201ENST00000314358 HSP90AB2PQ58FF8 381 aa25.38■■□□□ 1.65
KDM3B-201ENST00000314358 AK7Q96M32 723 aa25.38■■□□□ 1.65
KDM3B-201ENST00000314358 HOOK1Q9UJC3 728 aaKnown RBP25.37■■□□□ 1.65
KDM3B-201ENST00000314358 FAM43AQ8N2R8 423 aa25.37■■□□□ 1.65
KDM3B-201ENST00000314358 G3BP1Q13283 466 aaKnown RBP eCLIP25.37■■□□□ 1.657e-8■■■□□ 15.1
KDM3B-201ENST00000314358 RIPK4P57078 832 aa25.36■■□□□ 1.65
KDM3B-201ENST00000314358 MAP7D2Q96T17 732 aa25.36■■□□□ 1.65
KDM3B-201ENST00000314358 CAGE1Q8TC20 777 aa25.36■■□□□ 1.65
KDM3B-201ENST00000314358 WASHC4Q2M389 1173 aa25.35■■□□□ 1.65
KDM3B-201ENST00000314358 EPS15P42566 896 aa25.35■■□□□ 1.65
KDM3B-201ENST00000314358 PLCD4Q9BRC7 762 aa25.35■■□□□ 1.65
KDM3B-201ENST00000314358 PHF23Q9BUL5 403 aaPredicted RBP25.34■■□□□ 1.65
KDM3B-201ENST00000314358 HMOX1P09601 288 aa25.34■■□□□ 1.65
KDM3B-201ENST00000314358 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.34■■□□□ 1.65
KDM3B-201ENST00000314358 CCDC144AA2RUR9 1427 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms