RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SMC4Q9NTJ3 1288 aa17.5■□□□□ 0.39
DDX54-202ENST00000314045 ABCC2Q92887 1545 aa17.5■□□□□ 0.39
DDX54-202ENST00000314045 SAMD9Q5K651 1589 aa17.5■□□□□ 0.39
DDX54-202ENST00000314045 CLUAP1Q96AJ1 413 aa17.48■□□□□ 0.39
DDX54-202ENST00000314045 C11orf95C9JLR9 678 aaPredicted RBP17.48■□□□□ 0.39
DDX54-202ENST00000314045 MTHFSP49914 203 aa17.48■□□□□ 0.39
DDX54-202ENST00000314045 ITSN2Q9NZM3 1697 aa17.48■□□□□ 0.39
DDX54-202ENST00000314045 ADGRF5Q8IZF2 1346 aa17.48■□□□□ 0.39
DDX54-202ENST00000314045 BRD4O60885 1362 aaPredicted RBP17.47■□□□□ 0.39
DDX54-202ENST00000314045 CDK19Q9BWU1 502 aa17.47■□□□□ 0.39
DDX54-202ENST00000314045 E9PSI1 815 aa17.46■□□□□ 0.39
DDX54-202ENST00000314045 PPP2R1AP30153 589 aa17.46■□□□□ 0.39
DDX54-202ENST00000314045 ITPRIPQ8IWB1 547 aa17.45■□□□□ 0.38
DDX54-202ENST00000314045 CABP1Q9NZU7 370 aa17.45■□□□□ 0.38
DDX54-202ENST00000314045 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
DDX54-202ENST00000314045 KDM5BQ9UGL1 1544 aa17.45■□□□□ 0.38
DDX54-202ENST00000314045 NGEFQ8N5V2 710 aa17.44■□□□□ 0.38
DDX54-202ENST00000314045 STK31Q9BXU1 1019 aa17.44■□□□□ 0.38
DDX54-202ENST00000314045 CEBPAP49715 358 aaPredicted RBP17.44■□□□□ 0.38
DDX54-202ENST00000314045 ANKLE2Q86XL3 938 aa17.44■□□□□ 0.38
DDX54-202ENST00000314045 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
DDX54-202ENST00000314045 ELL2O00472 640 aaPredicted RBP17.43■□□□□ 0.38
DDX54-202ENST00000314045 ATF3P18847 181 aa17.43■□□□□ 0.38
DDX54-202ENST00000314045 OS9Q13438 667 aaPredicted RBP17.43■□□□□ 0.38
DDX54-202ENST00000314045 NLRP6P59044 892 aa17.43■□□□□ 0.38
DDX54-202ENST00000314045 RUNDC1Q96C34 613 aa17.43■□□□□ 0.38
DDX54-202ENST00000314045 CHMP4AQ9BY43 222 aa17.42■□□□□ 0.38
DDX54-202ENST00000314045 PROSER2Q86WR7 435 aaPredicted RBP17.42■□□□□ 0.38
DDX54-202ENST00000314045 PMFBP1Q8TBY8 1022 aa17.42■□□□□ 0.38
DDX54-202ENST00000314045 A2MP01023 1474 aa17.42■□□□□ 0.38
DDX54-202ENST00000314045 ZNF518AQ6AHZ1 1483 aa17.42■□□□□ 0.38
DDX54-202ENST00000314045 MAPKBP1O60336 1514 aa17.42■□□□□ 0.38
DDX54-202ENST00000314045 DUOX2Q9NRD8 1548 aa17.42■□□□□ 0.38
DDX54-202ENST00000314045 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
DDX54-202ENST00000314045 BCL2L13Q9BXK5 485 aa17.41■□□□□ 0.38
DDX54-202ENST00000314045 RIPK4P57078 832 aa17.41■□□□□ 0.38
DDX54-202ENST00000314045 BECN1Q14457 450 aa17.4■□□□□ 0.38
DDX54-202ENST00000314045 DDRGK1Q96HY6 314 aa17.4■□□□□ 0.38
DDX54-202ENST00000314045 PLIN1O60240 522 aa17.4■□□□□ 0.38
DDX54-202ENST00000314045 HMOX1P09601 288 aa17.39■□□□□ 0.37
DDX54-202ENST00000314045 CCDC184Q52MB2 194 aa17.39■□□□□ 0.37
DDX54-202ENST00000314045 RWDD1Q9H446 243 aaPredicted RBP17.39■□□□□ 0.37
DDX54-202ENST00000314045 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
DDX54-202ENST00000314045 RTEL1-TNFRSF6BF6WH68 1400 aa17.38■□□□□ 0.37
DDX54-202ENST00000314045 WAPLQ7Z5K2 1190 aa17.38■□□□□ 0.37
DDX54-202ENST00000314045 CCDC9Q9Y3X0 531 aaKnown RBP17.38■□□□□ 0.37
DDX54-202ENST00000314045 ABCC10Q5T3U5 1492 aa17.37■□□□□ 0.37
DDX54-202ENST00000314045 PNISRQ8TF01 805 aaKnown RBP17.37■□□□□ 0.37
DDX54-202ENST00000314045 ESCO1Q5FWF5 840 aa17.36■□□□□ 0.37
DDX54-202ENST00000314045 TEX14Q8IWB6 1497 aa17.36■□□□□ 0.37
DDX54-202ENST00000314045 NOS1P29475 1434 aa17.36■□□□□ 0.37
DDX54-202ENST00000314045 NBR1Q14596 966 aa17.36■□□□□ 0.37
DDX54-202ENST00000314045 ZNF692Q9BU19 519 aaPredicted RBP17.36■□□□□ 0.37
DDX54-202ENST00000314045 MAGI3Q5TCQ9 1506 aa17.36■□□□□ 0.37
DDX54-202ENST00000314045 APBB1O00213 710 aa17.36■□□□□ 0.37
DDX54-202ENST00000314045 RRP1P56182 461 aaKnown RBP17.35■□□□□ 0.37
DDX54-202ENST00000314045 SHANK2Q9UPX8 1470 aa17.35■□□□□ 0.37
DDX54-202ENST00000314045 ATAD2Q6PL18 1390 aa17.35■□□□□ 0.37
DDX54-202ENST00000314045 ABTB2Q8N961 1025 aa17.35■□□□□ 0.37
DDX54-202ENST00000314045 ZNF330Q9Y3S2 320 aaPredicted RBP17.35■□□□□ 0.37
DDX54-202ENST00000314045 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
DDX54-202ENST00000314045 TCP11L2Q8N4U5 519 aa17.35■□□□□ 0.37
DDX54-202ENST00000314045 C14orf93Q9H972 538 aaKnown RBP17.35■□□□□ 0.37
DDX54-202ENST00000314045 CCDC61Q9Y6R9 512 aa17.35■□□□□ 0.37
DDX54-202ENST00000314045 TEFQ10587 303 aa17.34■□□□□ 0.37
DDX54-202ENST00000314045 NPHP1O15259 732 aa17.33■□□□□ 0.36
DDX54-202ENST00000314045 EIF5BO60841 1220 aaKnown RBP17.33■□□□□ 0.36
DDX54-202ENST00000314045 C1orf141Q5JVX7 400 aa17.33■□□□□ 0.36
DDX54-202ENST00000314045 FAM135AQ9P2D6 1515 aa17.32■□□□□ 0.36
DDX54-202ENST00000314045 GPRASP1Q5JY77 1395 aa17.32■□□□□ 0.36
DDX54-202ENST00000314045 EXOC6Q8TAG9 804 aa17.32■□□□□ 0.36
DDX54-202ENST00000314045 NUDT16Q96DE0 195 aaKnown RBP17.31■□□□□ 0.36
DDX54-202ENST00000314045 EVA1CP58658 441 aa17.31■□□□□ 0.36
DDX54-202ENST00000314045 ZKSCAN2Q63HK3 967 aa17.31■□□□□ 0.36
DDX54-202ENST00000314045 CDCA7LQ96GN5 454 aa17.3■□□□□ 0.36
DDX54-202ENST00000314045 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
DDX54-202ENST00000314045 COG6Q9Y2V7 657 aa17.29■□□□□ 0.36
DDX54-202ENST00000314045 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
DDX54-202ENST00000314045 CRBNQ96SW2 442 aa17.28■□□□□ 0.36
DDX54-202ENST00000314045 SCAF11Q99590 1463 aaKnown RBP17.28■□□□□ 0.36
DDX54-202ENST00000314045 PRKAR2BP31323 418 aa17.28■□□□□ 0.36
DDX54-202ENST00000314045 NSD3Q9BZ95 1437 aa17.27■□□□□ 0.35
DDX54-202ENST00000314045 AMOTL2Q9Y2J4 779 aa17.26■□□□□ 0.35
DDX54-202ENST00000314045 ABCA8O94911 1581 aa17.26■□□□□ 0.35
DDX54-202ENST00000314045 ADGRL2O95490 1459 aa17.26■□□□□ 0.35
DDX54-202ENST00000314045 GNAI1P63096 354 aa17.26■□□□□ 0.35
DDX54-202ENST00000314045 PZPP20742 1482 aa17.25■□□□□ 0.35
DDX54-202ENST00000314045 NLRP2Q9NX02 1062 aa17.25■□□□□ 0.35
DDX54-202ENST00000314045 RBM19Q9Y4C8 960 aaKnown RBP17.25■□□□□ 0.35
DDX54-202ENST00000314045 TNRQ92752 1358 aa17.25■□□□□ 0.35
DDX54-202ENST00000314045 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
DDX54-202ENST00000314045 HMMRO75330 724 aa17.24■□□□□ 0.35
DDX54-202ENST00000314045 HDAC5Q9UQL6 1122 aa17.23■□□□□ 0.35
DDX54-202ENST00000314045 PRAG1Q86YV5 1406 aa17.21■□□□□ 0.35
DDX54-202ENST00000314045 WASLO00401 505 aaPredicted RBP17.21■□□□□ 0.35
DDX54-202ENST00000314045 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
DDX54-202ENST00000314045 DISP3Q9P2K9 1392 aa17.21■□□□□ 0.35
DDX54-202ENST00000314045 SULT6B1Q6IMI4 303 aa17.21■□□□□ 0.35
DDX54-202ENST00000314045 KCNJ4P48050 445 aa17.21■□□□□ 0.34
DDX54-202ENST00000314045 RRS1Q15050 365 aaKnown RBP17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms