RNA–Protein interactions for RNA: ENST00000308862.10

PIKFYVE-202, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,640 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-202ENST00000308862 STAG3Q9UJ98 1225 aa22.11■■□□□ 1.13
PIKFYVE-202ENST00000308862 CEP170BQ9Y4F5 1589 aaPredicted RBP22.1■■□□□ 1.13
PIKFYVE-202ENST00000308862 RPGRIP1LQ68CZ1 1315 aa22.08■■□□□ 1.13
PIKFYVE-202ENST00000308862 TRPM1Q7Z4N2 1603 aa22.08■■□□□ 1.13
PIKFYVE-202ENST00000308862 NBPF8Q3BBV2 869 aa22.07■■□□□ 1.12
PIKFYVE-202ENST00000308862 STAC3Q96MF2 364 aa22.06■■□□□ 1.12
PIKFYVE-202ENST00000308862 RALGAPBQ86X10 1494 aa22.06■■□□□ 1.12
PIKFYVE-202ENST00000308862 NRXN1Q9ULB1 1477 aa22.06■■□□□ 1.12
PIKFYVE-202ENST00000308862 KDM4FA0A1W2PPD8 638 aa22.06■■□□□ 1.12
PIKFYVE-202ENST00000308862 ZFYVE9O95405 1425 aa22.03■■□□□ 1.12
PIKFYVE-202ENST00000308862 RIMS2Q9UQ26 1411 aa22.03■■□□□ 1.12
PIKFYVE-202ENST00000308862 KIAA1210Q9ULL0 1709 aa22.02■■□□□ 1.12
PIKFYVE-202ENST00000308862 SETD1BQ9UPS6 1966 aaKnown RBP22.02■■□□□ 1.12
PIKFYVE-202ENST00000308862 PIK3C2GO75747 1445 aa22.01■■□□□ 1.11
PIKFYVE-202ENST00000308862 ADGRF5Q8IZF2 1346 aa22.01■■□□□ 1.11
PIKFYVE-202ENST00000308862 TMEM2Q9UHN6 1383 aa22■■□□□ 1.11
PIKFYVE-202ENST00000308862 SLIT1O75093 1534 aa22■■□□□ 1.11
PIKFYVE-202ENST00000308862 LAMC1P11047 1609 aa21.99■■□□□ 1.11
PIKFYVE-202ENST00000308862 VGFO15240 615 aaPredicted RBP21.98■■□□□ 1.11
PIKFYVE-202ENST00000308862 NUTM2DQ5VT03 806 aaPredicted RBP21.98■■□□□ 1.11
PIKFYVE-202ENST00000308862 ARHGAP23Q9P227 1491 aa21.97■■□□□ 1.11
PIKFYVE-202ENST00000308862 ROCK2O75116 1388 aaKnown RBP21.96■■□□□ 1.11
PIKFYVE-202ENST00000308862 THEMISQ8N1K5 641 aaPredicted RBP21.94■■□□□ 1.1
PIKFYVE-202ENST00000308862 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.94■■□□□ 1.1
PIKFYVE-202ENST00000308862 IQGAP1P46940 1657 aa21.92■■□□□ 1.1
PIKFYVE-202ENST00000308862 GPRASP1Q5JY77 1395 aa21.92■■□□□ 1.1
PIKFYVE-202ENST00000308862 SETBP1Q9Y6X0 1596 aa21.91■■□□□ 1.1
PIKFYVE-202ENST00000308862 NRXN3Q9Y4C0 1643 aa21.91■■□□□ 1.1
PIKFYVE-202ENST00000308862 HDGFP51858 240 aaKnown RBP21.91■■□□□ 1.1
PIKFYVE-202ENST00000308862 SCAF11Q99590 1463 aaKnown RBP21.9■■□□□ 1.1
PIKFYVE-202ENST00000308862 SETD1AO15047 1707 aaKnown RBP21.89■■□□□ 1.09
PIKFYVE-202ENST00000308862 ALKQ9UM73 1620 aa21.89■■□□□ 1.09
PIKFYVE-202ENST00000308862 NBPF1Q3BBV0 1214 aa21.88■■□□□ 1.09
PIKFYVE-202ENST00000308862 CFAP70Q5T0N1 1121 aa21.88■■□□□ 1.09
PIKFYVE-202ENST00000308862 CARD11Q9BXL7 1154 aa21.88■■□□□ 1.09
PIKFYVE-202ENST00000308862 ADGRB1O14514 1584 aa21.88■■□□□ 1.09
PIKFYVE-202ENST00000308862 EID1Q9Y6B2 187 aa21.88■■□□□ 1.09
PIKFYVE-202ENST00000308862 POLR1AO95602 1720 aaPredicted RBP21.87■■□□□ 1.09
PIKFYVE-202ENST00000308862 ASXL1Q8IXJ9 1541 aa21.86■■□□□ 1.09
PIKFYVE-202ENST00000308862 USP47Q96K76 1375 aa21.86■■□□□ 1.09
PIKFYVE-202ENST00000308862 PLEKHG1Q9ULL1 1385 aa21.86■■□□□ 1.09
PIKFYVE-202ENST00000308862 LTKP29376 864 aa21.86■■□□□ 1.09
PIKFYVE-202ENST00000308862 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
PIKFYVE-202ENST00000308862 C14orf93Q9H972 538 aaKnown RBP21.86■■□□□ 1.09
PIKFYVE-202ENST00000308862 TXNDC2Q86VQ3 553 aa21.85■■□□□ 1.09
PIKFYVE-202ENST00000308862 LMTK3Q96Q04 1460 aa21.83■■□□□ 1.09
PIKFYVE-202ENST00000308862 EIF4G2P78344 907 aaKnown RBP eCLIP21.83■■□□□ 1.08
PIKFYVE-202ENST00000308862 DIP2AQ14689 1571 aa21.81■■□□□ 1.08
PIKFYVE-202ENST00000308862 HSPA5P11021 654 aaKnown RBP21.8■■□□□ 1.08
PIKFYVE-202ENST00000308862 ADAMTS13Q76LX8 1427 aa21.8■■□□□ 1.08
PIKFYVE-202ENST00000308862 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
PIKFYVE-202ENST00000308862 ANKLE2Q86XL3 938 aa21.78■■□□□ 1.08
PIKFYVE-202ENST00000308862 BCANQ96GW7 911 aa21.78■■□□□ 1.08
PIKFYVE-202ENST00000308862 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.07
PIKFYVE-202ENST00000308862 HIRIP3Q9BW71 556 aaPredicted RBP21.77■■□□□ 1.07
PIKFYVE-202ENST00000308862 ARHGEF28Q8N1W1 1705 aaKnown RBP21.76■■□□□ 1.07
PIKFYVE-202ENST00000308862 EIF3AQ14152 1382 aaKnown RBP21.76■■□□□ 1.07
PIKFYVE-202ENST00000308862 MED14O60244 1454 aa21.76■■□□□ 1.07
PIKFYVE-202ENST00000308862 YTHDC2Q9H6S0 1430 aaKnown RBP21.74■■□□□ 1.07
PIKFYVE-202ENST00000308862 KNDC1Q76NI1 1749 aa21.74■■□□□ 1.07
PIKFYVE-202ENST00000308862 NPHP4O75161 1426 aaPredicted RBP21.73■■□□□ 1.07
PIKFYVE-202ENST00000308862 METP08581 1390 aa21.72■■□□□ 1.07
PIKFYVE-202ENST00000308862 HSPA2P54652 639 aa21.71■■□□□ 1.07
PIKFYVE-202ENST00000308862 QRICH2Q9H0J4 1663 aa21.7■■□□□ 1.06
PIKFYVE-202ENST00000308862 ST20-MTHFSA0A0A6YYL1 179 aa21.7■■□□□ 1.06
PIKFYVE-202ENST00000308862 LRPPRCP42704 1394 aaKnown RBP21.7■■□□□ 1.06
PIKFYVE-202ENST00000308862 SLC26A8Q96RN1 970 aa21.69■■□□□ 1.06
PIKFYVE-202ENST00000308862 TRAK1Q9UPV9 953 aa21.69■■□□□ 1.06
PIKFYVE-202ENST00000308862 NCKAP5LQ9HCH0 1330 aa21.69■■□□□ 1.06
PIKFYVE-202ENST00000308862 DLC1Q96QB1 1528 aa21.69■■□□□ 1.06
PIKFYVE-202ENST00000308862 CPS1P31327 1500 aa21.68■■□□□ 1.06
PIKFYVE-202ENST00000308862 STK26Q9P289 416 aa21.67■■□□□ 1.06
PIKFYVE-202ENST00000308862 TBX22Q9Y458 520 aa21.67■■□□□ 1.06
PIKFYVE-202ENST00000308862 XRN1Q8IZH2 1706 aaKnown RBP21.66■■□□□ 1.06
PIKFYVE-202ENST00000308862 STRCQ7RTU9 1775 aa21.66■■□□□ 1.06
PIKFYVE-202ENST00000308862 TECPR2O15040 1411 aa21.66■■□□□ 1.06
PIKFYVE-202ENST00000308862 CENPJQ9HC77 1338 aaPredicted RBP21.64■■□□□ 1.05
PIKFYVE-202ENST00000308862 ABCC11Q96J66 1382 aa21.64■■□□□ 1.05
PIKFYVE-202ENST00000308862 PIK3R4Q99570 1358 aa21.64■■□□□ 1.05
PIKFYVE-202ENST00000308862 PTPRUQ92729 1446 aa21.64■■□□□ 1.05
PIKFYVE-202ENST00000308862 TESK2Q96S53 571 aa21.62■■□□□ 1.05
PIKFYVE-202ENST00000308862 SBNO2Q9Y2G9 1366 aa21.62■■□□□ 1.05
PIKFYVE-202ENST00000308862 CHD2O14647 1828 aaKnown RBP21.61■■□□□ 1.05
PIKFYVE-202ENST00000308862 PTCH1Q13635 1447 aa21.59■■□□□ 1.05
PIKFYVE-202ENST00000308862 NWD1Q149M9 1564 aa21.59■■□□□ 1.05
PIKFYVE-202ENST00000308862 FAM135BQ49AJ0 1406 aa21.59■■□□□ 1.05
PIKFYVE-202ENST00000308862 PRAM1Q96QH2 718 aa21.58■■□□□ 1.05
PIKFYVE-202ENST00000308862 CCDC7Q96M83 1385 aa21.58■■□□□ 1.05
PIKFYVE-202ENST00000308862 DISP3Q9P2K9 1392 aa21.58■■□□□ 1.05
PIKFYVE-202ENST00000308862 WASHC2AQ641Q2 1341 aa21.57■■□□□ 1.04
PIKFYVE-202ENST00000308862 C11orf95C9JLR9 678 aaPredicted RBP21.57■■□□□ 1.04
PIKFYVE-202ENST00000308862 ROBO2Q9HCK4 1378 aa21.56■■□□□ 1.04
PIKFYVE-202ENST00000308862 KIF7Q2M1P5 1343 aa21.56■■□□□ 1.04
PIKFYVE-202ENST00000308862 POGKQ9P215 609 aa21.56■■□□□ 1.04
PIKFYVE-202ENST00000308862 TMF1P82094 1093 aa21.55■■□□□ 1.04
PIKFYVE-202ENST00000308862 AMOTL2Q9Y2J4 779 aa21.55■■□□□ 1.04
PIKFYVE-202ENST00000308862 PLEKHH1Q9ULM0 1364 aa21.55■■□□□ 1.04
PIKFYVE-202ENST00000308862 SAFB2Q14151 953 aaKnown RBP eCLIP21.55■■□□□ 1.04
PIKFYVE-202ENST00000308862 TULP4Q9NRJ4 1543 aa21.54■■□□□ 1.04
PIKFYVE-202ENST00000308862 SIRT1Q96EB6 747 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms