RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 EFCAB6Q5THR3 1501 aa13.97□□□□□ -0.17
APOBEC3F-201ENST00000308521 ZBED9Q6R2W3 1325 aa13.97□□□□□ -0.17
APOBEC3F-201ENST00000308521 IRX6P78412 446 aaPredicted RBP13.96□□□□□ -0.17
APOBEC3F-201ENST00000308521 FBXO31Q5XUX0 539 aaPredicted RBP13.96□□□□□ -0.17
APOBEC3F-201ENST00000308521 PRKRIP1Q9H875 184 aaPredicted RBP13.96□□□□□ -0.17
APOBEC3F-201ENST00000308521 RNF17Q9BXT8 1623 aaKnown RBP13.96□□□□□ -0.17
APOBEC3F-201ENST00000308521 POLR1AO95602 1720 aaPredicted RBP13.95□□□□□ -0.18
APOBEC3F-201ENST00000308521 ABCC3O15438 1527 aa13.95□□□□□ -0.18
APOBEC3F-201ENST00000308521 ADGRF5Q8IZF2 1346 aa13.93□□□□□ -0.18
APOBEC3F-201ENST00000308521 CCDC184Q52MB2 194 aa13.93□□□□□ -0.18
APOBEC3F-201ENST00000308521 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
APOBEC3F-201ENST00000308521 LMTK2Q8IWU2 1503 aa13.92□□□□□ -0.18
APOBEC3F-201ENST00000308521 BCORL1Q5H9F3 1711 aa13.92□□□□□ -0.18
APOBEC3F-201ENST00000308521 ARID4BQ4LE39 1312 aaPredicted RBP13.92□□□□□ -0.18
APOBEC3F-201ENST00000308521 CFAP70Q5T0N1 1121 aa13.92□□□□□ -0.18
APOBEC3F-201ENST00000308521 IDI1Q13907 227 aa13.91□□□□□ -0.18
APOBEC3F-201ENST00000308521 SLC24A1O60721 1099 aa13.91□□□□□ -0.18
APOBEC3F-201ENST00000308521 ZMYM4Q5VZL5 1548 aa13.91□□□□□ -0.18
APOBEC3F-201ENST00000308521 TRPM1Q7Z4N2 1603 aa13.9□□□□□ -0.18
APOBEC3F-201ENST00000308521 MRS2Q9HD23 443 aa13.89□□□□□ -0.19
APOBEC3F-201ENST00000308521 SIGLEC1Q9BZZ2 1709 aa13.89□□□□□ -0.19
APOBEC3F-201ENST00000308521 CAMSAP1Q5T5Y3 1602 aa13.88□□□□□ -0.19
APOBEC3F-201ENST00000308521 FAM9BQ8IZU0 186 aa13.87□□□□□ -0.19
APOBEC3F-201ENST00000308521 NOS1P29475 1434 aa13.87□□□□□ -0.19
APOBEC3F-201ENST00000308521 GPRASP1Q5JY77 1395 aa13.86□□□□□ -0.19
APOBEC3F-201ENST00000308521 SMG6Q86US8 1419 aaKnown RBP13.86□□□□□ -0.19
APOBEC3F-201ENST00000308521 MROH2AA6NES4 1674 aa13.86□□□□□ -0.19
APOBEC3F-201ENST00000308521 KIF1BO60333 1816 aa13.86□□□□□ -0.19
APOBEC3F-201ENST00000308521 TMEM132EQ6IEE7 984 aa13.85□□□□□ -0.19
APOBEC3F-201ENST00000308521 TESK2Q96S53 571 aa13.85□□□□□ -0.19
APOBEC3F-201ENST00000308521 ESF1Q9H501 851 aaKnown RBP13.85□□□□□ -0.19
APOBEC3F-201ENST00000308521 B4GALNT3Q6L9W6 998 aa13.84□□□□□ -0.19
APOBEC3F-201ENST00000308521 MADDQ8WXG6 1647 aa13.84□□□□□ -0.19
APOBEC3F-201ENST00000308521 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
APOBEC3F-201ENST00000308521 SYNMO15061 1565 aa13.83□□□□□ -0.2
APOBEC3F-201ENST00000308521 STAG3Q9UJ98 1225 aa13.83□□□□□ -0.2
APOBEC3F-201ENST00000308521 DISP3Q9P2K9 1392 aa13.83□□□□□ -0.2
APOBEC3F-201ENST00000308521 DNAJC5Q9H3Z4 198 aa13.82□□□□□ -0.2
APOBEC3F-201ENST00000308521 SLC52A1Q9NWF4 448 aa13.82□□□□□ -0.2
APOBEC3F-201ENST00000308521 ARHGAP31Q2M1Z3 1444 aa13.82□□□□□ -0.2
APOBEC3F-201ENST00000308521 STAC3Q96MF2 364 aa13.81□□□□□ -0.2
APOBEC3F-201ENST00000308521 TRAK1Q9UPV9 953 aa13.81□□□□□ -0.2
APOBEC3F-201ENST00000308521 SALL2Q9Y467 1007 aaPredicted RBP13.81□□□□□ -0.2
APOBEC3F-201ENST00000308521 ADGRB3O60242 1522 aa13.81□□□□□ -0.2
APOBEC3F-201ENST00000308521 ARHGEF40Q8TER5 1519 aa13.8□□□□□ -0.2
APOBEC3F-201ENST00000308521 CLTCQ00610 1675 aaKnown RBP13.79□□□□□ -0.2
APOBEC3F-201ENST00000308521 CEBPAP49715 358 aaPredicted RBP13.79□□□□□ -0.2
APOBEC3F-201ENST00000308521 TMF1P82094 1093 aa13.79□□□□□ -0.2
APOBEC3F-201ENST00000308521 NUDCQ9Y266 331 aa13.79□□□□□ -0.2
APOBEC3F-201ENST00000308521 AGLP35573 1532 aa13.79□□□□□ -0.2
APOBEC3F-201ENST00000308521 NOP58Q9Y2X3 529 aaKnown RBP13.78□□□□□ -0.2
APOBEC3F-201ENST00000308521 ZMYM3Q14202 1370 aa13.78□□□□□ -0.2
APOBEC3F-201ENST00000308521 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.2
APOBEC3F-201ENST00000308521 ZC3H13Q5T200 1668 aaKnown RBP13.77□□□□□ -0.2
APOBEC3F-201ENST00000308521 C14orf93Q9H972 538 aaKnown RBP13.77□□□□□ -0.21
APOBEC3F-201ENST00000308521 PREX1Q8TCU6 1659 aa13.77□□□□□ -0.21
APOBEC3F-201ENST00000308521 MYOM2P54296 1465 aa13.77□□□□□ -0.21
APOBEC3F-201ENST00000308521 SCAF11Q99590 1463 aaKnown RBP13.77□□□□□ -0.21
APOBEC3F-201ENST00000308521 RPGRIP1LQ68CZ1 1315 aa13.76□□□□□ -0.21
APOBEC3F-201ENST00000308521 REREQ9P2R6 1566 aa13.76□□□□□ -0.21
APOBEC3F-201ENST00000308521 ERVK-7P63135 1459 aa13.76□□□□□ -0.21
APOBEC3F-201ENST00000308521 STK26Q9P289 416 aa13.76□□□□□ -0.21
APOBEC3F-201ENST00000308521 SAFB2Q14151 953 aaKnown RBP eCLIP13.75□□□□□ -0.21
APOBEC3F-201ENST00000308521 PANK3Q9H999 370 aa13.75□□□□□ -0.21
APOBEC3F-201ENST00000308521 PIK3C2BO00750 1634 aa13.75□□□□□ -0.21
APOBEC3F-201ENST00000308521 MYO5BQ9ULV0 1848 aa13.75□□□□□ -0.21
APOBEC3F-201ENST00000308521 NEURL4Q96JN8 1562 aa13.74□□□□□ -0.21
APOBEC3F-201ENST00000308521 IFT172Q9UG01 1749 aa13.74□□□□□ -0.21
APOBEC3F-201ENST00000308521 PIK3C2GO75747 1445 aa13.74□□□□□ -0.21
APOBEC3F-201ENST00000308521 PPLO60437 1756 aa13.73□□□□□ -0.21
APOBEC3F-201ENST00000308521 LAMC1P11047 1609 aa13.73□□□□□ -0.21
APOBEC3F-201ENST00000308521 NRXN1Q9ULB1 1477 aa13.73□□□□□ -0.21
APOBEC3F-201ENST00000308521 SENP3-EIF4A1A0A087X0R7 540 aa13.72□□□□□ -0.21
APOBEC3F-201ENST00000308521 CC2D1BQ5T0F9 858 aaKnown RBP13.72□□□□□ -0.21
APOBEC3F-201ENST00000308521 NEXMIFQ5QGS0 1516 aa13.72□□□□□ -0.21
APOBEC3F-201ENST00000308521 IQGAP1P46940 1657 aa13.71□□□□□ -0.21
APOBEC3F-201ENST00000308521 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.22
APOBEC3F-201ENST00000308521 CCDC136Q96JN2 1154 aa13.71□□□□□ -0.22
APOBEC3F-201ENST00000308521 PER1O15534 1290 aaPredicted RBP13.7□□□□□ -0.22
APOBEC3F-201ENST00000308521 EIF3AQ14152 1382 aaKnown RBP13.7□□□□□ -0.22
APOBEC3F-201ENST00000308521 TMEM131LA2VDJ0 1609 aa13.7□□□□□ -0.22
APOBEC3F-201ENST00000308521 CENPJQ9HC77 1338 aaPredicted RBP13.7□□□□□ -0.22
APOBEC3F-201ENST00000308521 PNISRQ8TF01 805 aaKnown RBP13.69□□□□□ -0.22
APOBEC3F-201ENST00000308521 IPO9Q96P70 1041 aaKnown RBP13.69□□□□□ -0.22
APOBEC3F-201ENST00000308521 ANP32AP39687 249 aaKnown RBP13.69□□□□□ -0.22
APOBEC3F-201ENST00000308521 KTN1Q86UP2 1357 aaKnown RBP13.68□□□□□ -0.22
APOBEC3F-201ENST00000308521 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
APOBEC3F-201ENST00000308521 KIAA1210Q9ULL0 1709 aa13.67□□□□□ -0.22
APOBEC3F-201ENST00000308521 LRPPRCP42704 1394 aaKnown RBP13.67□□□□□ -0.22
APOBEC3F-201ENST00000308521 A2ML1A8K2U0 1454 aa13.66□□□□□ -0.22
APOBEC3F-201ENST00000308521 ADGRB1O14514 1584 aa13.66□□□□□ -0.22
APOBEC3F-201ENST00000308521 SPATA31D1Q6ZQQ2 1576 aa13.66□□□□□ -0.22
APOBEC3F-201ENST00000308521 TNRQ92752 1358 aa13.66□□□□□ -0.22
APOBEC3F-201ENST00000308521 TMC1Q8TDI8 760 aa13.66□□□□□ -0.22
APOBEC3F-201ENST00000308521 CDCA8Q53HL2 280 aa13.65□□□□□ -0.22
APOBEC3F-201ENST00000308521 BRD4O60885 1362 aaPredicted RBP13.64□□□□□ -0.23
APOBEC3F-201ENST00000308521 RIMS2Q9UQ26 1411 aa13.64□□□□□ -0.23
APOBEC3F-201ENST00000308521 RTL5Q5HYW3 569 aaPredicted RBP13.64□□□□□ -0.23
APOBEC3F-201ENST00000308521 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
APOBEC3F-201ENST00000308521 KNSTRNQ9Y448 316 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 1096.1 ms