RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 FGD6Q6ZV73 1430 aa18.87■□□□□ 0.61
SMIM4-201ENST00000307106 KANK1Q14678 1352 aa18.86■□□□□ 0.61
SMIM4-201ENST00000307106 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.86■□□□□ 0.61
SMIM4-201ENST00000307106 GCC2Q8IWJ2 1684 aa18.85■□□□□ 0.61
SMIM4-201ENST00000307106 AHDC1Q5TGY3 1603 aaPredicted RBP18.85■□□□□ 0.61
SMIM4-201ENST00000307106 LMTK2Q8IWU2 1503 aa18.85■□□□□ 0.61
SMIM4-201ENST00000307106 BCANQ96GW7 911 aa18.84■□□□□ 0.61
SMIM4-201ENST00000307106 RRP7BPQ9NSQ0 103 aa18.82■□□□□ 0.6
SMIM4-201ENST00000307106 NOS1P29475 1434 aa18.82■□□□□ 0.6
SMIM4-201ENST00000307106 CDK12Q9NYV4 1490 aaPredicted RBP18.8■□□□□ 0.6
SMIM4-201ENST00000307106 RXRBP28702 533 aa18.8■□□□□ 0.6
SMIM4-201ENST00000307106 PTPN23Q9H3S7 1636 aa18.8■□□□□ 0.6
SMIM4-201ENST00000307106 ABCC5O15440 1437 aa18.8■□□□□ 0.6
SMIM4-201ENST00000307106 DIP2AQ14689 1571 aa18.79■□□□□ 0.6
SMIM4-201ENST00000307106 ZFYVE9O95405 1425 aa18.77■□□□□ 0.6
SMIM4-201ENST00000307106 NCOA3Q9Y6Q9 1424 aa18.77■□□□□ 0.6
SMIM4-201ENST00000307106 PLEKHG1Q9ULL1 1385 aa18.77■□□□□ 0.6
SMIM4-201ENST00000307106 TMEM131LA2VDJ0 1609 aa18.76■□□□□ 0.59
SMIM4-201ENST00000307106 C14orf37Q86TY3 774 aa18.76■□□□□ 0.59
SMIM4-201ENST00000307106 VPS8Q8N3P4 1428 aa18.75■□□□□ 0.59
SMIM4-201ENST00000307106 KANK4Q5T7N3 995 aaPredicted RBP18.75■□□□□ 0.59
SMIM4-201ENST00000307106 SLC52A1Q9NWF4 448 aa18.75■□□□□ 0.59
SMIM4-201ENST00000307106 DAPK1P53355 1430 aa18.74■□□□□ 0.59
SMIM4-201ENST00000307106 CADPS2Q86UW7 1296 aa18.73■□□□□ 0.59
SMIM4-201ENST00000307106 RIMS2Q9UQ26 1411 aa18.73■□□□□ 0.59
SMIM4-201ENST00000307106 NHSL1Q5SYE7 1610 aa18.72■□□□□ 0.59
SMIM4-201ENST00000307106 NUTM2BA6NNL0 878 aaPredicted RBP18.72■□□□□ 0.59
SMIM4-201ENST00000307106 NUTM2EB1AL46 878 aaPredicted RBP18.72■□□□□ 0.59
SMIM4-201ENST00000307106 PPP1R15AO75807 674 aaPredicted RBP18.72■□□□□ 0.59
SMIM4-201ENST00000307106 NUTM2AQ8IVF1 878 aaPredicted RBP18.72■□□□□ 0.59
SMIM4-201ENST00000307106 ATF3P18847 181 aa18.71■□□□□ 0.59
SMIM4-201ENST00000307106 RPRD2Q5VT52 1461 aaKnown RBP18.71■□□□□ 0.59
SMIM4-201ENST00000307106 C19orf44Q9H6X5 657 aa18.7■□□□□ 0.58
SMIM4-201ENST00000307106 TBX22Q9Y458 520 aa18.7■□□□□ 0.58
SMIM4-201ENST00000307106 AFF2P51816 1311 aa18.7■□□□□ 0.58
SMIM4-201ENST00000307106 ANKRD30AQ9BXX3 1397 aa18.69■□□□□ 0.58
SMIM4-201ENST00000307106 RGS12O14924 1447 aa18.69■□□□□ 0.58
SMIM4-201ENST00000307106 HDGFP51858 240 aaKnown RBP18.69■□□□□ 0.58
SMIM4-201ENST00000307106 ADAMTS13Q76LX8 1427 aa18.67■□□□□ 0.58
SMIM4-201ENST00000307106 BRINP3Q76B58 766 aa18.67■□□□□ 0.58
SMIM4-201ENST00000307106 ASXL1Q8IXJ9 1541 aa18.67■□□□□ 0.58
SMIM4-201ENST00000307106 SRCAPQ6ZRS2 3230 aa18.66■□□□□ 0.58
SMIM4-201ENST00000307106 CHIC2Q9UKJ5 165 aa18.66■□□□□ 0.58
SMIM4-201ENST00000307106 TRPM2O94759 1503 aa18.65■□□□□ 0.58
SMIM4-201ENST00000307106 PIK3R4Q99570 1358 aa18.65■□□□□ 0.58
SMIM4-201ENST00000307106 SETD5Q9C0A6 1442 aa18.64■□□□□ 0.57
SMIM4-201ENST00000307106 E9PCH4 1651 aa18.63■□□□□ 0.57
SMIM4-201ENST00000307106 RBM6P78332 1123 aaKnown RBP18.62■□□□□ 0.57
SMIM4-201ENST00000307106 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMIM4-201ENST00000307106 DCCP43146 1447 aa18.62■□□□□ 0.57
SMIM4-201ENST00000307106 UNC13BO14795 1591 aa18.62■□□□□ 0.57
SMIM4-201ENST00000307106 XRN1Q8IZH2 1706 aaKnown RBP18.62■□□□□ 0.57
SMIM4-201ENST00000307106 NUTM2DQ5VT03 806 aaPredicted RBP18.61■□□□□ 0.57
SMIM4-201ENST00000307106 C8orf37Q96NL8 207 aa18.61■□□□□ 0.57
SMIM4-201ENST00000307106 CHGAP10645 457 aaKnown RBP18.6■□□□□ 0.57
SMIM4-201ENST00000307106 QTRT2Q9H974 415 aaKnown RBP18.6■□□□□ 0.57
SMIM4-201ENST00000307106 ADGRL2O95490 1459 aa18.59■□□□□ 0.57
SMIM4-201ENST00000307106 MST1RQ04912 1400 aa18.58■□□□□ 0.57
SMIM4-201ENST00000307106 PTPRUQ92729 1446 aa18.58■□□□□ 0.57
SMIM4-201ENST00000307106 AMOTL2Q9Y2J4 779 aa18.58■□□□□ 0.56
SMIM4-201ENST00000307106 NRXN3Q9Y4C0 1643 aa18.57■□□□□ 0.56
SMIM4-201ENST00000307106 LRRC59Q96AG4 307 aaKnown RBP18.57■□□□□ 0.56
SMIM4-201ENST00000307106 NALCNQ8IZF0 1738 aa18.57■□□□□ 0.56
SMIM4-201ENST00000307106 ATAD2Q6PL18 1390 aa18.56■□□□□ 0.56
SMIM4-201ENST00000307106 ANKRD50Q9ULJ7 1429 aa18.56■□□□□ 0.56
SMIM4-201ENST00000307106 PNPLA6Q8IY17 1366 aa18.55■□□□□ 0.56
SMIM4-201ENST00000307106 NGLY1Q96IV0 654 aa18.54■□□□□ 0.56
SMIM4-201ENST00000307106 SETBP1Q9Y6X0 1596 aa18.54■□□□□ 0.56
SMIM4-201ENST00000307106 FOXD1Q16676 465 aa18.52■□□□□ 0.56
SMIM4-201ENST00000307106 ZRANB1Q9UGI0 708 aa18.52■□□□□ 0.56
SMIM4-201ENST00000307106 LAMC1P11047 1609 aa18.52■□□□□ 0.55
SMIM4-201ENST00000307106 IQGAP3Q86VI3 1631 aa18.52■□□□□ 0.55
SMIM4-201ENST00000307106 DDX17Q92841 729 aaKnown RBP18.51■□□□□ 0.55
SMIM4-201ENST00000307106 MARF1Q9Y4F3 1742 aaKnown RBP18.51■□□□□ 0.55
SMIM4-201ENST00000307106 EP400Q96L91 3159 aa18.5■□□□□ 0.55
SMIM4-201ENST00000307106 ADAMTS2O95450 1211 aa18.5■□□□□ 0.55
SMIM4-201ENST00000307106 ADGRL3Q9HAR2 1447 aa18.48■□□□□ 0.55
SMIM4-201ENST00000307106 SPHKAPQ2M3C7 1700 aa18.47■□□□□ 0.55
SMIM4-201ENST00000307106 APLP2Q06481 763 aa18.47■□□□□ 0.55
SMIM4-201ENST00000307106 USP21Q9UK80 565 aa18.46■□□□□ 0.55
SMIM4-201ENST00000307106 COL22A1Q8NFW1 1626 aaPredicted RBP18.45■□□□□ 0.54
SMIM4-201ENST00000307106 TRPC5Q9UL62 973 aaPredicted RBP18.45■□□□□ 0.54
SMIM4-201ENST00000307106 LOC105371045A0A1W2PR82 267 aa18.43■□□□□ 0.54
SMIM4-201ENST00000307106 METP08581 1390 aa18.42■□□□□ 0.54
SMIM4-201ENST00000307106 ATRNO75882 1429 aa18.42■□□□□ 0.54
SMIM4-201ENST00000307106 PTCH1Q13635 1447 aa18.42■□□□□ 0.54
SMIM4-201ENST00000307106 C1orf167Q5SNV9 1468 aa18.41■□□□□ 0.54
SMIM4-201ENST00000307106 FAM50AQ14320 339 aaKnown RBP18.41■□□□□ 0.54
SMIM4-201ENST00000307106 BRWD3Q6RI45 1802 aa18.41■□□□□ 0.54
SMIM4-201ENST00000307106 CCDC125Q86Z20 511 aa18.4■□□□□ 0.54
SMIM4-201ENST00000307106 FNBP4Q8N3X1 1017 aaPredicted RBP18.4■□□□□ 0.54
SMIM4-201ENST00000307106 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.39■□□□□ 0.53
SMIM4-201ENST00000307106 KIF1BO60333 1816 aa18.39■□□□□ 0.53
SMIM4-201ENST00000307106 SOS2Q07890 1332 aaPredicted RBP18.38■□□□□ 0.53
SMIM4-201ENST00000307106 LRP5O75197 1615 aa18.37■□□□□ 0.53
SMIM4-201ENST00000307106 NEXMIFQ5QGS0 1516 aa18.35■□□□□ 0.53
SMIM4-201ENST00000307106 ZNF326Q5BKZ1 582 aaKnown RBP18.35■□□□□ 0.53
SMIM4-201ENST00000307106 ORAI2Q96SN7 254 aa18.34■□□□□ 0.53
SMIM4-201ENST00000307106 BCL9LQ86UU0 1499 aa18.33■□□□□ 0.53
SMIM4-201ENST00000307106 MYOM2P54296 1465 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms