RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 NBPF1Q3BBV0 1214 aa8.2□□□□□ -1.1
TTC39C-201ENST00000304621 SPATA31D1Q6ZQQ2 1576 aa8.19□□□□□ -1.1
TTC39C-201ENST00000304621 IDI1Q13907 227 aa8.19□□□□□ -1.1
TTC39C-201ENST00000304621 MYO5BQ9ULV0 1848 aa8.19□□□□□ -1.1
TTC39C-201ENST00000304621 C11orf95C9JLR9 678 aaPredicted RBP8.19□□□□□ -1.1
TTC39C-201ENST00000304621 CHGAP10645 457 aaKnown RBP8.19□□□□□ -1.1
TTC39C-201ENST00000304621 PPLO60437 1756 aa8.19□□□□□ -1.1
TTC39C-201ENST00000304621 ADGRF5Q8IZF2 1346 aa8.18□□□□□ -1.1
TTC39C-201ENST00000304621 TMEM131LA2VDJ0 1609 aa8.18□□□□□ -1.1
TTC39C-201ENST00000304621 EIF4G2P78344 907 aaKnown RBP eCLIP8.18□□□□□ -1.1
TTC39C-201ENST00000304621 ZMYM3Q14202 1370 aa8.18□□□□□ -1.1
TTC39C-201ENST00000304621 MYOM2P54296 1465 aa8.18□□□□□ -1.1
TTC39C-201ENST00000304621 USP47Q96K76 1375 aa8.18□□□□□ -1.1
TTC39C-201ENST00000304621 NEXMIFQ5QGS0 1516 aa8.17□□□□□ -1.1
TTC39C-201ENST00000304621 NRXN1Q9ULB1 1477 aa8.17□□□□□ -1.1
TTC39C-201ENST00000304621 ROCK2O75116 1388 aaKnown RBP8.17□□□□□ -1.1
TTC39C-201ENST00000304621 GPRASP1Q5JY77 1395 aa8.17□□□□□ -1.1
TTC39C-201ENST00000304621 SLC4A2P04920 1241 aa8.17□□□□□ -1.1
TTC39C-201ENST00000304621 CARD11Q9BXL7 1154 aa8.17□□□□□ -1.1
TTC39C-201ENST00000304621 LAMC1P11047 1609 aa8.16□□□□□ -1.1
TTC39C-201ENST00000304621 FER1L4A9Z1Z3 1794 aa8.16□□□□□ -1.1
TTC39C-201ENST00000304621 WASHC2AQ641Q2 1341 aa8.16□□□□□ -1.1
TTC39C-201ENST00000304621 C3P01024 1663 aa8.16□□□□□ -1.1
TTC39C-201ENST00000304621 CEBPAP49715 358 aaPredicted RBP8.15□□□□□ -1.1
TTC39C-201ENST00000304621 NUTM2DQ5VT03 806 aaPredicted RBP8.15□□□□□ -1.1
TTC39C-201ENST00000304621 SLC52A1Q9NWF4 448 aa8.15□□□□□ -1.1
TTC39C-201ENST00000304621 DDX10Q13206 875 aaKnown RBP8.15□□□□□ -1.1
TTC39C-201ENST00000304621 RNF39Q9H2S5 420 aa8.15□□□□□ -1.1
TTC39C-201ENST00000304621 IQGAP1P46940 1657 aa8.14□□□□□ -1.11
TTC39C-201ENST00000304621 CFAP70Q5T0N1 1121 aa8.14□□□□□ -1.11
TTC39C-201ENST00000304621 MIER1Q8N108 512 aa8.14□□□□□ -1.11
TTC39C-201ENST00000304621 PIK3C2GO75747 1445 aa8.14□□□□□ -1.11
TTC39C-201ENST00000304621 A2ML1A8K2U0 1454 aa8.14□□□□□ -1.11
TTC39C-201ENST00000304621 KIAA1210Q9ULL0 1709 aa8.14□□□□□ -1.11
TTC39C-201ENST00000304621 ESF1Q9H501 851 aaKnown RBP8.14□□□□□ -1.11
TTC39C-201ENST00000304621 ST20-MTHFSA0A0A6YYL1 179 aa8.13□□□□□ -1.11
TTC39C-201ENST00000304621 TNRQ92752 1358 aa8.13□□□□□ -1.11
TTC39C-201ENST00000304621 CCDC7Q96M83 1385 aa8.13□□□□□ -1.11
TTC39C-201ENST00000304621 POLR1AO95602 1720 aaPredicted RBP8.13□□□□□ -1.11
TTC39C-201ENST00000304621 KIF7Q2M1P5 1343 aa8.13□□□□□ -1.11
TTC39C-201ENST00000304621 ADAMTSL3P82987 1691 aa8.12□□□□□ -1.11
TTC39C-201ENST00000304621 RIMS1Q86UR5 1692 aaKnown RBP8.12□□□□□ -1.11
TTC39C-201ENST00000304621 STAC3Q96MF2 364 aa8.12□□□□□ -1.11
TTC39C-201ENST00000304621 RPGRIP1LQ68CZ1 1315 aa8.12□□□□□ -1.11
TTC39C-201ENST00000304621 ADGRB1O14514 1584 aa8.12□□□□□ -1.11
TTC39C-201ENST00000304621 UBR1Q8IWV7 1749 aa8.11□□□□□ -1.11
TTC39C-201ENST00000304621 ASXL1Q8IXJ9 1541 aa8.11□□□□□ -1.11
TTC39C-201ENST00000304621 SCAF11Q99590 1463 aaKnown RBP8.1□□□□□ -1.11
TTC39C-201ENST00000304621 ZFYVE9O95405 1425 aa8.1□□□□□ -1.11
TTC39C-201ENST00000304621 TESK2Q96S53 571 aa8.1□□□□□ -1.11
TTC39C-201ENST00000304621 C14orf93Q9H972 538 aaKnown RBP8.1□□□□□ -1.11
TTC39C-201ENST00000304621 SETBP1Q9Y6X0 1596 aa8.1□□□□□ -1.11
TTC39C-201ENST00000304621 RIMS2Q9UQ26 1411 aa8.1□□□□□ -1.11
TTC39C-201ENST00000304621 DISP3Q9P2K9 1392 aa8.09□□□□□ -1.11
TTC39C-201ENST00000304621 TMEM132EQ6IEE7 984 aa8.09□□□□□ -1.11
TTC39C-201ENST00000304621 VGFO15240 615 aaPredicted RBP8.08□□□□□ -1.12
TTC39C-201ENST00000304621 C1QBPQ07021 282 aaKnown RBP8.08□□□□□ -1.12
TTC39C-201ENST00000304621 FOXD4L1Q9NU39 408 aa8.08□□□□□ -1.12
TTC39C-201ENST00000304621 STAG3Q9UJ98 1225 aa8.08□□□□□ -1.12
TTC39C-201ENST00000304621 PTPRMP28827 1452 aa8.08□□□□□ -1.12
TTC39C-201ENST00000304621 MYO3AQ8NEV4 1616 aa8.08□□□□□ -1.12
TTC39C-201ENST00000304621 NRXN3Q9Y4C0 1643 aa8.08□□□□□ -1.12
TTC39C-201ENST00000304621 SETD1AO15047 1707 aaKnown RBP8.08□□□□□ -1.12
TTC39C-201ENST00000304621 KDM5AP29375 1690 aaKnown RBP8.08□□□□□ -1.12
TTC39C-201ENST00000304621 NLRP1Q9C000 1473 aa8.07□□□□□ -1.12
TTC39C-201ENST00000304621 ALKQ9UM73 1620 aa8.07□□□□□ -1.12
TTC39C-201ENST00000304621 POLR3GLQ9BT43 218 aa8.07□□□□□ -1.12
TTC39C-201ENST00000304621 U3KPZ7 1027 aaPredicted RBP8.07□□□□□ -1.12
TTC39C-201ENST00000304621 ARHGEF28Q8N1W1 1705 aaKnown RBP8.06□□□□□ -1.12
TTC39C-201ENST00000304621 TRAK1Q9UPV9 953 aa8.06□□□□□ -1.12
TTC39C-201ENST00000304621 TMEM2Q9UHN6 1383 aa8.05□□□□□ -1.12
TTC39C-201ENST00000304621 LTKP29376 864 aa8.04□□□□□ -1.12
TTC39C-201ENST00000304621 QRICH2Q9H0J4 1663 aa8.04□□□□□ -1.12
TTC39C-201ENST00000304621 CEP170BQ9Y4F5 1589 aaPredicted RBP8.04□□□□□ -1.12
TTC39C-201ENST00000304621 ARHGAP23Q9P227 1491 aa8.04□□□□□ -1.12
TTC39C-201ENST00000304621 SLIT1O75093 1534 aa8.03□□□□□ -1.12
TTC39C-201ENST00000304621 EIF3AQ14152 1382 aaKnown RBP8.03□□□□□ -1.12
TTC39C-201ENST00000304621 STK26Q9P289 416 aa8.03□□□□□ -1.12
TTC39C-201ENST00000304621 YTHDC2Q9H6S0 1430 aaKnown RBP8.03□□□□□ -1.12
TTC39C-201ENST00000304621 MYOM1P52179 1685 aa8.03□□□□□ -1.12
TTC39C-201ENST00000304621 METP08581 1390 aa8.02□□□□□ -1.12
TTC39C-201ENST00000304621 ZNF142P52746 1687 aaPredicted RBP8.02□□□□□ -1.13
TTC39C-201ENST00000304621 ADAMTS13Q76LX8 1427 aa8.02□□□□□ -1.13
TTC39C-201ENST00000304621 TMF1P82094 1093 aa8.02□□□□□ -1.13
TTC39C-201ENST00000304621 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.02□□□□□ -1.13
TTC39C-201ENST00000304621 CENPJQ9HC77 1338 aaPredicted RBP8.02□□□□□ -1.13
TTC39C-201ENST00000304621 MYCNP04198 464 aaPredicted RBP8.01□□□□□ -1.13
TTC39C-201ENST00000304621 TULP4Q9NRJ4 1543 aa8.01□□□□□ -1.13
TTC39C-201ENST00000304621 PLEKHG1Q9ULL1 1385 aa8□□□□□ -1.13
TTC39C-201ENST00000304621 MED14O60244 1454 aa8□□□□□ -1.13
TTC39C-201ENST00000304621 TXNDC2Q86VQ3 553 aa8□□□□□ -1.13
TTC39C-201ENST00000304621 PLEKHH1Q9ULM0 1364 aa8□□□□□ -1.13
TTC39C-201ENST00000304621 SBNO2Q9Y2G9 1366 aa8□□□□□ -1.13
TTC39C-201ENST00000304621 ZBTB22O15209 634 aa8□□□□□ -1.13
TTC39C-201ENST00000304621 ANP32CO43423 234 aa8□□□□□ -1.13
TTC39C-201ENST00000304621 SAFB2Q14151 953 aaKnown RBP eCLIP8□□□□□ -1.13
TTC39C-201ENST00000304621 LRPPRCP42704 1394 aaKnown RBP7.99□□□□□ -1.13
TTC39C-201ENST00000304621 PTPRUQ92729 1446 aa7.99□□□□□ -1.13
TTC39C-201ENST00000304621 DLC1Q96QB1 1528 aa7.99□□□□□ -1.13
TTC39C-201ENST00000304621 CCDC184Q52MB2 194 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms