RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 TMEM94Q12767 1356 aa10.45□□□□□ -0.74
ITGB1-201ENST00000302278 IQGAP3Q86VI3 1631 aa10.45□□□□□ -0.74
ITGB1-201ENST00000302278 XRN1Q8IZH2 1706 aaKnown RBP10.44□□□□□ -0.74
ITGB1-201ENST00000302278 PLEKHG1Q9ULL1 1385 aa10.43□□□□□ -0.74
ITGB1-201ENST00000302278 LRP6O75581 1613 aa10.43□□□□□ -0.74
ITGB1-201ENST00000302278 POTEAQ6S8J7 498 aa10.42□□□□□ -0.74
ITGB1-201ENST00000302278 TXNDC2Q86VQ3 553 aa10.42□□□□□ -0.74
ITGB1-201ENST00000302278 JCADQ9P266 1359 aa10.42□□□□□ -0.74
ITGB1-201ENST00000302278 E9PCH4 1651 aa10.41□□□□□ -0.74
ITGB1-201ENST00000302278 EID1Q9Y6B2 187 aa10.41□□□□□ -0.74
ITGB1-201ENST00000302278 NRXN3Q9Y4C0 1643 aa10.41□□□□□ -0.74
ITGB1-201ENST00000302278 PIK3R4Q99570 1358 aa10.41□□□□□ -0.74
ITGB1-201ENST00000302278 DCCP43146 1447 aa10.4□□□□□ -0.74
ITGB1-201ENST00000302278 KANK1Q14678 1352 aa10.4□□□□□ -0.74
ITGB1-201ENST00000302278 SETBP1Q9Y6X0 1596 aa10.39□□□□□ -0.75
ITGB1-201ENST00000302278 TRPM2O94759 1503 aa10.39□□□□□ -0.75
ITGB1-201ENST00000302278 SPATA31A6Q5VVP1 1343 aa10.39□□□□□ -0.75
ITGB1-201ENST00000302278 MSH6P52701 1360 aa10.38□□□□□ -0.75
ITGB1-201ENST00000302278 ADAMTS13Q76LX8 1427 aa10.38□□□□□ -0.75
ITGB1-201ENST00000302278 SLC52A1Q9NWF4 448 aa10.37□□□□□ -0.75
ITGB1-201ENST00000302278 IDI1Q13907 227 aa10.36□□□□□ -0.75
ITGB1-201ENST00000302278 ANKRD30AQ9BXX3 1397 aa10.36□□□□□ -0.75
ITGB1-201ENST00000302278 COL22A1Q8NFW1 1626 aaPredicted RBP10.35□□□□□ -0.75
ITGB1-201ENST00000302278 PRAG1Q86YV5 1406 aa10.35□□□□□ -0.75
ITGB1-201ENST00000302278 SETD5Q9C0A6 1442 aa10.35□□□□□ -0.75
ITGB1-201ENST00000302278 RIMS2Q9UQ26 1411 aa10.35□□□□□ -0.75
ITGB1-201ENST00000302278 ASXL1Q8IXJ9 1541 aa10.35□□□□□ -0.75
ITGB1-201ENST00000302278 KANK4Q5T7N3 995 aaPredicted RBP10.34□□□□□ -0.75
ITGB1-201ENST00000302278 SPHKAPQ2M3C7 1700 aa10.34□□□□□ -0.75
ITGB1-201ENST00000302278 NALCNQ8IZF0 1738 aa10.34□□□□□ -0.75
ITGB1-201ENST00000302278 TBX22Q9Y458 520 aa10.33□□□□□ -0.76
ITGB1-201ENST00000302278 SLAIN2Q9P270 581 aa10.33□□□□□ -0.76
ITGB1-201ENST00000302278 MARF1Q9Y4F3 1742 aaKnown RBP10.33□□□□□ -0.76
ITGB1-201ENST00000302278 PROSER2Q86WR7 435 aaPredicted RBP10.31□□□□□ -0.76
ITGB1-201ENST00000302278 ZNF772Q68DY9 489 aaPredicted RBP10.31□□□□□ -0.76
ITGB1-201ENST00000302278 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.3□□□□□ -0.76
ITGB1-201ENST00000302278 UPF1Q92900 1129 aaKnown RBP eCLIP10.3□□□□□ -0.76
ITGB1-201ENST00000302278 PTPRUQ92729 1446 aa10.3□□□□□ -0.76
ITGB1-201ENST00000302278 MST1RQ04912 1400 aa10.29□□□□□ -0.76
ITGB1-201ENST00000302278 ANKRD50Q9ULJ7 1429 aa10.29□□□□□ -0.76
ITGB1-201ENST00000302278 ROCK1Q13464 1354 aa10.29□□□□□ -0.76
ITGB1-201ENST00000302278 RRP7BPQ9NSQ0 103 aa10.28□□□□□ -0.76
ITGB1-201ENST00000302278 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.28□□□□□ -0.76
ITGB1-201ENST00000302278 SLC26A8Q96RN1 970 aa10.27□□□□□ -0.76
ITGB1-201ENST00000302278 HDGFP51858 240 aaKnown RBP10.27□□□□□ -0.77
ITGB1-201ENST00000302278 NEXMIFQ5QGS0 1516 aa10.27□□□□□ -0.77
ITGB1-201ENST00000302278 RGS12O14924 1447 aa10.27□□□□□ -0.77
ITGB1-201ENST00000302278 CADPS2Q86UW7 1296 aa10.26□□□□□ -0.77
ITGB1-201ENST00000302278 C19orf44Q9H6X5 657 aa10.26□□□□□ -0.77
ITGB1-201ENST00000302278 ADGRL3Q9HAR2 1447 aa10.25□□□□□ -0.77
ITGB1-201ENST00000302278 STAG3Q9UJ98 1225 aa10.25□□□□□ -0.77
ITGB1-201ENST00000302278 KIF1BO60333 1816 aa10.24□□□□□ -0.77
ITGB1-201ENST00000302278 PTCH1Q13635 1447 aa10.24□□□□□ -0.77
ITGB1-201ENST00000302278 BRINP3Q76B58 766 aa10.23□□□□□ -0.77
ITGB1-201ENST00000302278 CLTCL1P53675 1640 aa10.23□□□□□ -0.77
ITGB1-201ENST00000302278 PNPLA6Q8IY17 1366 aa10.23□□□□□ -0.77
ITGB1-201ENST00000302278 LRP5O75197 1615 aa10.22□□□□□ -0.77
ITGB1-201ENST00000302278 KNDC1Q76NI1 1749 aa10.22□□□□□ -0.77
ITGB1-201ENST00000302278 PPLO60437 1756 aa10.22□□□□□ -0.77
ITGB1-201ENST00000302278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.21□□□□□ -0.771e-12■□□□□ 10
ITGB1-201ENST00000302278 CDC42BPGQ6DT37 1551 aa10.21□□□□□ -0.77
ITGB1-201ENST00000302278 RXRBP28702 533 aa10.21□□□□□ -0.78
ITGB1-201ENST00000302278 SENP3Q9H4L4 574 aaPredicted RBP10.2□□□□□ -0.78
ITGB1-201ENST00000302278 ATRNO75882 1429 aa10.2□□□□□ -0.78
ITGB1-201ENST00000302278 RBM33Q96EV2 1170 aaKnown RBP10.2□□□□□ -0.78
ITGB1-201ENST00000302278 IFT172Q9UG01 1749 aa10.2□□□□□ -0.78
ITGB1-201ENST00000302278 MYOM2P54296 1465 aa10.18□□□□□ -0.78
ITGB1-201ENST00000302278 C1orf167Q5SNV9 1468 aa10.18□□□□□ -0.78
ITGB1-201ENST00000302278 ATF3P18847 181 aa10.18□□□□□ -0.78
ITGB1-201ENST00000302278 AFF2P51816 1311 aa10.18□□□□□ -0.78
ITGB1-201ENST00000302278 KIF1AQ12756 1690 aa10.17□□□□□ -0.78
ITGB1-201ENST00000302278 ABCA3Q99758 1704 aa10.17□□□□□ -0.78
ITGB1-201ENST00000302278 NWD2Q9ULI1 1742 aa10.16□□□□□ -0.78
ITGB1-201ENST00000302278 AMOTL2Q9Y2J4 779 aa10.16□□□□□ -0.78
ITGB1-201ENST00000302278 RBM6P78332 1123 aaKnown RBP10.16□□□□□ -0.78
ITGB1-201ENST00000302278 PXDNQ92626 1479 aa10.16□□□□□ -0.78
ITGB1-201ENST00000302278 METP08581 1390 aa10.16□□□□□ -0.78
ITGB1-201ENST00000302278 ATAD2Q6PL18 1390 aa10.16□□□□□ -0.78
ITGB1-201ENST00000302278 MEX3CQ5U5Q3 659 aaKnown RBP10.16□□□□□ -0.78
ITGB1-201ENST00000302278 LRRC59Q96AG4 307 aaKnown RBP10.16□□□□□ -0.78
ITGB1-201ENST00000302278 SOS2Q07890 1332 aaPredicted RBP10.16□□□□□ -0.78
ITGB1-201ENST00000302278 FMN2Q9NZ56 1722 aa10.15□□□□□ -0.78
ITGB1-201ENST00000302278 PPP1R15AO75807 674 aaPredicted RBP10.15□□□□□ -0.79
ITGB1-201ENST00000302278 BRWD3Q6RI45 1802 aa10.14□□□□□ -0.79
ITGB1-201ENST00000302278 FNBP4Q8N3X1 1017 aaPredicted RBP10.14□□□□□ -0.79
ITGB1-201ENST00000302278 CHIC2Q9UKJ5 165 aa10.13□□□□□ -0.79
ITGB1-201ENST00000302278 GLI3P10071 1580 aa10.13□□□□□ -0.79
ITGB1-201ENST00000302278 HFM1A2PYH4 1435 aa10.13□□□□□ -0.79
ITGB1-201ENST00000302278 TRIM52Q96A61 297 aa10.13□□□□□ -0.79
ITGB1-201ENST00000302278 TECPR2O15040 1411 aa10.13□□□□□ -0.79
ITGB1-201ENST00000302278 PLCH1Q4KWH8 1693 aa10.13□□□□□ -0.79
ITGB1-201ENST00000302278 BCL9LQ86UU0 1499 aa10.12□□□□□ -0.79
ITGB1-201ENST00000302278 USP32Q8NFA0 1604 aa10.11□□□□□ -0.79
ITGB1-201ENST00000302278 NRAPQ86VF7 1730 aa10.11□□□□□ -0.79
ITGB1-201ENST00000302278 CCDC125Q86Z20 511 aa10.11□□□□□ -0.79
ITGB1-201ENST00000302278 SLIT2O94813 1529 aa10.1□□□□□ -0.79
ITGB1-201ENST00000302278 BCANQ96GW7 911 aa10.1□□□□□ -0.79
ITGB1-201ENST00000302278 CRYBG1Q9Y4K1 1723 aa10.1□□□□□ -0.79
ITGB1-201ENST00000302278 QTRT2Q9H974 415 aaKnown RBP10.09□□□□□ -0.79
ITGB1-201ENST00000302278 NGLY1Q96IV0 654 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms