RNA–Protein interactions for RNA: ENST00000301821.10

RPSA-201, Transcript of ribosomal protein SA, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPSA, Length 1,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-201ENST00000301821 LMTK2Q8IWU2 1503 aa16.09■□□□□ 0.17
RPSA-201ENST00000301821 BCANQ96GW7 911 aa16.08■□□□□ 0.16
RPSA-201ENST00000301821 MSH6P52701 1360 aa16.08■□□□□ 0.16
RPSA-201ENST00000301821 NOS1P29475 1434 aa16.04■□□□□ 0.16
RPSA-201ENST00000301821 JCADQ9P266 1359 aa16.04■□□□□ 0.16
RPSA-201ENST00000301821 CHIC2Q9UKJ5 165 aa16.04■□□□□ 0.16
RPSA-201ENST00000301821 ANKRD30AQ9BXX3 1397 aa16.03■□□□□ 0.16
RPSA-201ENST00000301821 COL16A1Q07092 1604 aaPredicted RBP16.03■□□□□ 0.16
RPSA-201ENST00000301821 SLAIN2Q9P270 581 aa16.02■□□□□ 0.16
RPSA-201ENST00000301821 FGD6Q6ZV73 1430 aa16.02■□□□□ 0.15
RPSA-201ENST00000301821 GCC2Q8IWJ2 1684 aa16.02■□□□□ 0.15
RPSA-201ENST00000301821 MYO5BQ9ULV0 1848 aa16.01■□□□□ 0.15
RPSA-201ENST00000301821 PPP1R15AO75807 674 aaPredicted RBP16■□□□□ 0.15
RPSA-201ENST00000301821 CHD2O14647 1828 aaKnown RBP16■□□□□ 0.15
RPSA-201ENST00000301821 LRP6O75581 1613 aa16■□□□□ 0.15
RPSA-201ENST00000301821 ZFYVE9O95405 1425 aa15.99■□□□□ 0.15
RPSA-201ENST00000301821 PLEKHG1Q9ULL1 1385 aa15.99■□□□□ 0.15
RPSA-201ENST00000301821 MEX3CQ5U5Q3 659 aaKnown RBP15.98■□□□□ 0.15
RPSA-201ENST00000301821 SLC52A1Q9NWF4 448 aa15.98■□□□□ 0.15
RPSA-201ENST00000301821 RIMS2Q9UQ26 1411 aa15.98■□□□□ 0.15
RPSA-201ENST00000301821 APLP2Q06481 763 aa15.97■□□□□ 0.15
RPSA-201ENST00000301821 C14orf37Q86TY3 774 aa15.97■□□□□ 0.15
RPSA-201ENST00000301821 RPRD2Q5VT52 1461 aaKnown RBP15.97■□□□□ 0.15
RPSA-201ENST00000301821 TRIM52Q96A61 297 aa15.96■□□□□ 0.15
RPSA-201ENST00000301821 TMEM131LA2VDJ0 1609 aa15.95■□□□□ 0.14
RPSA-201ENST00000301821 ADGRL2O95490 1459 aa15.95■□□□□ 0.14
RPSA-201ENST00000301821 SPATA31A6Q5VVP1 1343 aa15.94■□□□□ 0.14
RPSA-201ENST00000301821 SHPRHQ149N8 1683 aa15.94■□□□□ 0.14
RPSA-201ENST00000301821 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.94■□□□□ 0.14
RPSA-201ENST00000301821 AHDC1Q5TGY3 1603 aaPredicted RBP15.94■□□□□ 0.14
RPSA-201ENST00000301821 CHGAP10645 457 aaKnown RBP15.92■□□□□ 0.14
RPSA-201ENST00000301821 HDGFP51858 240 aaKnown RBP15.92■□□□□ 0.14
RPSA-201ENST00000301821 ZNF772Q68DY9 489 aaPredicted RBP15.92■□□□□ 0.14
RPSA-201ENST00000301821 UPF1Q92900 1129 aaKnown RBP eCLIP15.92■□□□□ 0.14
RPSA-201ENST00000301821 ANKRD50Q9ULJ7 1429 aa15.92■□□□□ 0.14
RPSA-201ENST00000301821 NCOA3Q9Y6Q9 1424 aa15.92■□□□□ 0.14
RPSA-201ENST00000301821 NUTM2DQ5VT03 806 aaPredicted RBP15.91■□□□□ 0.14
RPSA-201ENST00000301821 ADAMTS13Q76LX8 1427 aa15.91■□□□□ 0.14
RPSA-201ENST00000301821 DIP2AQ14689 1571 aa15.91■□□□□ 0.14
RPSA-201ENST00000301821 CADPS2Q86UW7 1296 aa15.9■□□□□ 0.14
RPSA-201ENST00000301821 TBX22Q9Y458 520 aa15.9■□□□□ 0.14
RPSA-201ENST00000301821 ATF3P18847 181 aa15.89■□□□□ 0.13
RPSA-201ENST00000301821 NUTM2BA6NNL0 878 aaPredicted RBP15.88■□□□□ 0.13
RPSA-201ENST00000301821 NUTM2EB1AL46 878 aaPredicted RBP15.88■□□□□ 0.13
RPSA-201ENST00000301821 FAM50AQ14320 339 aaKnown RBP15.88■□□□□ 0.13
RPSA-201ENST00000301821 NUTM2AQ8IVF1 878 aaPredicted RBP15.88■□□□□ 0.13
RPSA-201ENST00000301821 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.88■□□□□ 0.13
RPSA-201ENST00000301821 UNC13BO14795 1591 aa15.87■□□□□ 0.13
RPSA-201ENST00000301821 E9PCH4 1651 aa15.87■□□□□ 0.13
RPSA-201ENST00000301821 C19orf44Q9H6X5 657 aa15.87■□□□□ 0.13
RPSA-201ENST00000301821 TRPM2O94759 1503 aa15.87■□□□□ 0.13
RPSA-201ENST00000301821 RXRBP28702 533 aa15.86■□□□□ 0.13
RPSA-201ENST00000301821 PIK3R4Q99570 1358 aa15.86■□□□□ 0.13
RPSA-201ENST00000301821 BRINP3Q76B58 766 aa15.85■□□□□ 0.13
RPSA-201ENST00000301821 ASXL1Q8IXJ9 1541 aa15.84■□□□□ 0.13
RPSA-201ENST00000301821 PTPRUQ92729 1446 aa15.84■□□□□ 0.13
RPSA-201ENST00000301821 CDK12Q9NYV4 1490 aaPredicted RBP15.83■□□□□ 0.12
RPSA-201ENST00000301821 AMOTL2Q9Y2J4 779 aa15.82■□□□□ 0.12
RPSA-201ENST00000301821 AFF2P51816 1311 aa15.82■□□□□ 0.12
RPSA-201ENST00000301821 DCCP43146 1447 aa15.81■□□□□ 0.12
RPSA-201ENST00000301821 NHSL1Q5SYE7 1610 aa15.81■□□□□ 0.12
RPSA-201ENST00000301821 IQGAP3Q86VI3 1631 aa15.81■□□□□ 0.12
RPSA-201ENST00000301821 XRN1Q8IZH2 1706 aaKnown RBP15.81■□□□□ 0.12
RPSA-201ENST00000301821 NRXN3Q9Y4C0 1643 aa15.79■□□□□ 0.12
RPSA-201ENST00000301821 MST1RQ04912 1400 aa15.79■□□□□ 0.12
RPSA-201ENST00000301821 RGS12O14924 1447 aa15.78■□□□□ 0.12
RPSA-201ENST00000301821 SETD5Q9C0A6 1442 aa15.78■□□□□ 0.12
RPSA-201ENST00000301821 C8orf37Q96NL8 207 aa15.78■□□□□ 0.12
RPSA-201ENST00000301821 SETBP1Q9Y6X0 1596 aa15.76■□□□□ 0.11
RPSA-201ENST00000301821 DDX17Q92841 729 aaKnown RBP15.75■□□□□ 0.11
RPSA-201ENST00000301821 PNPLA6Q8IY17 1366 aa15.75■□□□□ 0.11
RPSA-201ENST00000301821 NALCNQ8IZF0 1738 aa15.74■□□□□ 0.11
RPSA-201ENST00000301821 LRRC59Q96AG4 307 aaKnown RBP15.74■□□□□ 0.11
RPSA-201ENST00000301821 NUP155O75694 1391 aa15.74■□□□□ 0.11
RPSA-201ENST00000301821 QTRT2Q9H974 415 aaKnown RBP15.73■□□□□ 0.11
RPSA-201ENST00000301821 ADGRL3Q9HAR2 1447 aa15.73■□□□□ 0.11
RPSA-201ENST00000301821 SPHKAPQ2M3C7 1700 aa15.73■□□□□ 0.11
RPSA-201ENST00000301821 RBM6P78332 1123 aaKnown RBP15.72■□□□□ 0.11
RPSA-201ENST00000301821 ZNF326Q5BKZ1 582 aaKnown RBP15.72■□□□□ 0.11
RPSA-201ENST00000301821 METP08581 1390 aa15.72■□□□□ 0.11
RPSA-201ENST00000301821 ROCK1Q13464 1354 aa15.71■□□□□ 0.11
RPSA-201ENST00000301821 ADAMTS2O95450 1211 aa15.7■□□□□ 0.1
RPSA-201ENST00000301821 NGLY1Q96IV0 654 aa15.68■□□□□ 0.1
RPSA-201ENST00000301821 ITGAEP38570 1179 aa15.67■□□□□ 0.1
RPSA-201ENST00000301821 NEXMIFQ5QGS0 1516 aa15.67■□□□□ 0.1
RPSA-201ENST00000301821 C1orf167Q5SNV9 1468 aa15.66■□□□□ 0.1
RPSA-201ENST00000301821 ATAD2Q6PL18 1390 aa15.66■□□□□ 0.1
RPSA-201ENST00000301821 CLTCL1P53675 1640 aa15.66■□□□□ 0.1
RPSA-201ENST00000301821 USP21Q9UK80 565 aa15.64■□□□□ 0.09
RPSA-201ENST00000301821 LAMC1P11047 1609 aa15.64■□□□□ 0.09
RPSA-201ENST00000301821 PPARGC1BQ86YN6 1023 aaKnown RBP15.62■□□□□ 0.09
RPSA-201ENST00000301821 PTCH1Q13635 1447 aa15.61■□□□□ 0.09
RPSA-201ENST00000301821 ORAI2Q96SN7 254 aa15.61■□□□□ 0.09
RPSA-201ENST00000301821 TRPC5Q9UL62 973 aaPredicted RBP15.61■□□□□ 0.09
RPSA-201ENST00000301821 SOS2Q07890 1332 aaPredicted RBP15.61■□□□□ 0.09
RPSA-201ENST00000301821 KIF1BO60333 1816 aa15.61■□□□□ 0.09
RPSA-201ENST00000301821 COL22A1Q8NFW1 1626 aaPredicted RBP15.6■□□□□ 0.09
RPSA-201ENST00000301821 ROBO2Q9HCK4 1378 aa15.59■□□□□ 0.09
RPSA-201ENST00000301821 ATRNO75882 1429 aa15.59■□□□□ 0.09
RPSA-201ENST00000301821 ZRANB1Q9UGI0 708 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms