RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 PHF14O94880 888 aa18.87■□□□□ 0.61
DDB1-201ENST00000301764 TPM2P07951 284 aa18.86■□□□□ 0.61
DDB1-201ENST00000301764 NUTM2DQ5VT03 806 aaPredicted RBP18.86■□□□□ 0.61
DDB1-201ENST00000301764 SLC4A10Q6U841 1118 aa18.86■□□□□ 0.61
DDB1-201ENST00000301764 RNF214Q8ND24 703 aa18.86■□□□□ 0.61
DDB1-201ENST00000301764 EFCAB2Q5VUJ9 269 aa18.86■□□□□ 0.61
DDB1-201ENST00000301764 TCP11L2Q8N4U5 519 aa18.86■□□□□ 0.61
DDB1-201ENST00000301764 CAVIN1Q6NZI2 390 aaKnown RBP18.85■□□□□ 0.61
DDB1-201ENST00000301764 CSPP1Q1MSJ5 1256 aa18.84■□□□□ 0.61
DDB1-201ENST00000301764 AAMPQ13685 434 aa18.84■□□□□ 0.61
DDB1-201ENST00000301764 NUCB2P80303 420 aa18.83■□□□□ 0.61
DDB1-201ENST00000301764 KIAA1107Q9UPP5 1409 aa18.83■□□□□ 0.6
DDB1-201ENST00000301764 HMMRO75330 724 aa18.83■□□□□ 0.6
DDB1-201ENST00000301764 ANKRD30BQ9BXX2 1392 aa18.83■□□□□ 0.6
DDB1-201ENST00000301764 JPH4Q96JJ6 628 aa18.82■□□□□ 0.6
DDB1-201ENST00000301764 PDS5BQ9NTI5 1447 aa18.81■□□□□ 0.6
DDB1-201ENST00000301764 SLFN5Q08AF3 891 aa18.79■□□□□ 0.6
DDB1-201ENST00000301764 RIPK4P57078 832 aa18.79■□□□□ 0.6
DDB1-201ENST00000301764 CCDC173Q0VFZ6 552 aa18.79■□□□□ 0.6
DDB1-201ENST00000301764 RTF1Q92541 710 aaKnown RBP18.79■□□□□ 0.6
DDB1-201ENST00000301764 TERF2IPQ9NYB0 399 aa18.79■□□□□ 0.6
DDB1-201ENST00000301764 RILPL2Q969X0 211 aa18.79■□□□□ 0.6
DDB1-201ENST00000301764 MAP7D2Q96T17 732 aa18.79■□□□□ 0.6
DDB1-201ENST00000301764 GAPVD1Q14C86 1478 aa18.78■□□□□ 0.6
DDB1-201ENST00000301764 TBC1D2Q9BYX2 928 aa18.78■□□□□ 0.6
DDB1-201ENST00000301764 A0A0U1RQG5 324 aaPredicted RBP18.77■□□□□ 0.6
DDB1-201ENST00000301764 SPAG9O60271 1321 aaKnown RBP18.77■□□□□ 0.6
DDB1-201ENST00000301764 ISY1Q9ULR0 285 aaKnown RBP18.77■□□□□ 0.6
DDB1-201ENST00000301764 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.77■□□□□ 0.6
DDB1-201ENST00000301764 REC8O95072 547 aa18.77■□□□□ 0.59
DDB1-201ENST00000301764 MTHFSP49914 203 aa18.77■□□□□ 0.59
DDB1-201ENST00000301764 MAP3K1Q13233 1512 aa18.76■□□□□ 0.59
DDB1-201ENST00000301764 PCF11O94913 1555 aaKnown RBP18.76■□□□□ 0.59
DDB1-201ENST00000301764 KIF16BQ96L93 1317 aa18.75■□□□□ 0.59
DDB1-201ENST00000301764 PRPF40AO75400 957 aaKnown RBP18.75■□□□□ 0.59
DDB1-201ENST00000301764 EXOSC9Q06265 439 aaKnown RBP18.74■□□□□ 0.59
DDB1-201ENST00000301764 ZNF771Q7L3S4 317 aaPredicted RBP18.74■□□□□ 0.59
DDB1-201ENST00000301764 MPNDQ8N594 471 aa18.74■□□□□ 0.59
DDB1-201ENST00000301764 TSR2Q969E8 191 aaKnown RBP18.74■□□□□ 0.59
DDB1-201ENST00000301764 DUSP27Q5VZP5 1158 aa18.73■□□□□ 0.59
DDB1-201ENST00000301764 STK31Q9BXU1 1019 aa18.73■□□□□ 0.59
DDB1-201ENST00000301764 EFCAB5A4FU69 1503 aa18.73■□□□□ 0.59
DDB1-201ENST00000301764 EHBP1L1Q8N3D4 1523 aa18.72■□□□□ 0.59
DDB1-201ENST00000301764 ZMYND15Q9H091 742 aa18.72■□□□□ 0.59
DDB1-201ENST00000301764 CHMP3Q9Y3E7 222 aa18.72■□□□□ 0.59
DDB1-201ENST00000301764 CDC45O75419 566 aa18.72■□□□□ 0.59
DDB1-201ENST00000301764 TNNT3P45378 269 aaPredicted RBP18.72■□□□□ 0.59
DDB1-201ENST00000301764 PANK2Q9BZ23 570 aa18.72■□□□□ 0.59
DDB1-201ENST00000301764 CCDC39Q9UFE4 941 aa18.71■□□□□ 0.59
DDB1-201ENST00000301764 PTPRKQ15262 1439 aa18.71■□□□□ 0.59
DDB1-201ENST00000301764 INTS3Q68E01 1043 aaKnown RBP18.71■□□□□ 0.59
DDB1-201ENST00000301764 MTERF4Q7Z6M4 381 aaKnown RBP18.71■□□□□ 0.59
DDB1-201ENST00000301764 C1orf115Q9H7X2 142 aa18.7■□□□□ 0.58
DDB1-201ENST00000301764 ANO2Q9NQ90 1003 aa18.7■□□□□ 0.58
DDB1-201ENST00000301764 DAPK1P53355 1430 aa18.7■□□□□ 0.58
DDB1-201ENST00000301764 IGHDP01880 384 aa18.7■□□□□ 0.58
DDB1-201ENST00000301764 C8orf34Q49A92 452 aa18.7■□□□□ 0.58
DDB1-201ENST00000301764 ZNF592Q92610 1267 aa18.7■□□□□ 0.58
DDB1-201ENST00000301764 XRCC6P12956 609 aaKnown RBP eCLIP18.69■□□□□ 0.584e-7■□□□□ 8.4
DDB1-201ENST00000301764 MVPQ14764 893 aaKnown RBP18.69■□□□□ 0.58
DDB1-201ENST00000301764 LMOD3Q0VAK6 560 aa18.69■□□□□ 0.58
DDB1-201ENST00000301764 ZSCAN30Q86W11 494 aa18.69■□□□□ 0.58
DDB1-201ENST00000301764 NCAPD3P42695 1498 aa18.69■□□□□ 0.58
DDB1-201ENST00000301764 AQRO60306 1485 aaKnown RBP eCLIP18.68■□□□□ 0.587e-7■■■■□ 23.5
DDB1-201ENST00000301764 K7ELQ4 463 aaPredicted RBP18.68■□□□□ 0.58
DDB1-201ENST00000301764 DIAPH1O60610 1272 aaKnown RBP18.68■□□□□ 0.58
DDB1-201ENST00000301764 RPRD2Q5VT52 1461 aaKnown RBP18.68■□□□□ 0.58
DDB1-201ENST00000301764 CFAP70Q5T0N1 1121 aa18.68■□□□□ 0.58
DDB1-201ENST00000301764 WWC1Q8IX03 1113 aa18.67■□□□□ 0.58
DDB1-201ENST00000301764 BCL11BQ9C0K0 894 aaPredicted RBP18.67■□□□□ 0.58
DDB1-201ENST00000301764 UQCRHLA0A096LP55 91 aa18.67■□□□□ 0.58
DDB1-201ENST00000301764 UQCRHP07919 91 aa18.67■□□□□ 0.58
DDB1-201ENST00000301764 ATP6V1DQ9Y5K8 247 aa18.67■□□□□ 0.58
DDB1-201ENST00000301764 PTPN23Q9H3S7 1636 aa18.67■□□□□ 0.58
DDB1-201ENST00000301764 API5Q9BZZ5 524 aaKnown RBP18.66■□□□□ 0.58
DDB1-201ENST00000301764 GGNBP2Q9H3C7 697 aa18.66■□□□□ 0.58
DDB1-201ENST00000301764 ERBINQ96RT1 1412 aa18.66■□□□□ 0.58
DDB1-201ENST00000301764 HTATSF1O43719 755 aaKnown RBP18.66■□□□□ 0.58
DDB1-201ENST00000301764 CIZ1Q9ULV3 898 aaPredicted RBP18.66■□□□□ 0.58
DDB1-201ENST00000301764 NOB1Q9ULX3 412 aaKnown RBP18.66■□□□□ 0.58
DDB1-201ENST00000301764 EVC2Q86UK5 1308 aa18.66■□□□□ 0.58
DDB1-201ENST00000301764 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
DDB1-201ENST00000301764 NINLQ9Y2I6 1382 aa18.64■□□□□ 0.57
DDB1-201ENST00000301764 NEK4P51957 841 aa18.64■□□□□ 0.57
DDB1-201ENST00000301764 CLCN1P35523 988 aa18.63■□□□□ 0.57
DDB1-201ENST00000301764 RABEP1Q15276 862 aa18.63■□□□□ 0.57
DDB1-201ENST00000301764 ATF7IPQ6VMQ6 1270 aa18.63■□□□□ 0.57
DDB1-201ENST00000301764 MBD3O95983 291 aa18.62■□□□□ 0.57
DDB1-201ENST00000301764 SLC12A5Q9H2X9 1139 aa18.62■□□□□ 0.57
DDB1-201ENST00000301764 SUPT6HQ7KZ85 1726 aaKnown RBP18.62■□□□□ 0.57
DDB1-201ENST00000301764 HMOX1P09601 288 aa18.62■□□□□ 0.57
DDB1-201ENST00000301764 TBC1D32Q96NH3 1257 aa18.62■□□□□ 0.57
DDB1-201ENST00000301764 LRPPRCP42704 1394 aaKnown RBP18.62■□□□□ 0.57
DDB1-201ENST00000301764 RARSP54136 660 aaKnown RBP18.61■□□□□ 0.57
DDB1-201ENST00000301764 TNPO1Q92973 898 aaKnown RBP18.61■□□□□ 0.57
DDB1-201ENST00000301764 MINK1Q8N4C8 1332 aaPredicted RBP18.61■□□□□ 0.57
DDB1-201ENST00000301764 ROCK1Q13464 1354 aa18.61■□□□□ 0.57
DDB1-201ENST00000301764 GOLGA6L19H0YKK7 550 aa18.61■□□□□ 0.57
DDB1-201ENST00000301764 TMEM132EQ6IEE7 984 aa18.6■□□□□ 0.57
DDB1-201ENST00000301764 CHD1LQ86WJ1 897 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms