RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 SYCP2Q9BX26 1530 aa6.47□□□□□ -1.37
ZNF560-201ENST00000301480 MBD5Q9P267 1494 aa6.46□□□□□ -1.37
ZNF560-201ENST00000301480 NCLP19338 710 aaKnown RBP6.46□□□□□ -1.37
ZNF560-201ENST00000301480 ARHGEF5Q12774 1597 aa6.46□□□□□ -1.38
ZNF560-201ENST00000301480 SECISBP2LQ93073 1101 aaKnown RBP6.46□□□□□ -1.38
ZNF560-201ENST00000301480 ZNF142P52746 1687 aaPredicted RBP6.46□□□□□ -1.38
ZNF560-201ENST00000301480 CCDC141Q6ZP82 1450 aa6.46□□□□□ -1.38
ZNF560-201ENST00000301480 HSPA2P54652 639 aa6.45□□□□□ -1.38
ZNF560-201ENST00000301480 FKBP8Q14318 412 aa6.45□□□□□ -1.38
ZNF560-201ENST00000301480 PTPRKQ15262 1439 aa6.45□□□□□ -1.38
ZNF560-201ENST00000301480 ZNF692Q9BU19 519 aaPredicted RBP6.45□□□□□ -1.38
ZNF560-201ENST00000301480 MIA2Q96PC5 1412 aa6.45□□□□□ -1.38
ZNF560-201ENST00000301480 TIAM1Q13009 1591 aa6.45□□□□□ -1.38
ZNF560-201ENST00000301480 STRCQ7RTU9 1775 aa6.44□□□□□ -1.38
ZNF560-201ENST00000301480 SUPT6HQ7KZ85 1726 aaKnown RBP6.44□□□□□ -1.38
ZNF560-201ENST00000301480 MAST1Q9Y2H9 1570 aa6.44□□□□□ -1.38
ZNF560-201ENST00000301480 A2ML1A8K2U0 1454 aa6.44□□□□□ -1.38
ZNF560-201ENST00000301480 TCOF1Q13428 1488 aaKnown RBP6.44□□□□□ -1.38
ZNF560-201ENST00000301480 CWC22Q9HCG8 908 aaKnown RBP6.44□□□□□ -1.38
ZNF560-201ENST00000301480 NLRP1Q9C000 1473 aa6.44□□□□□ -1.38
ZNF560-201ENST00000301480 HNRNPMP52272 730 aaKnown RBP eCLIP6.43□□□□□ -1.38
ZNF560-201ENST00000301480 CERS3Q8IU89 383 aa6.43□□□□□ -1.38
ZNF560-201ENST00000301480 KDM5DQ9BY66 1539 aa6.43□□□□□ -1.38
ZNF560-201ENST00000301480 PZPP20742 1482 aa6.43□□□□□ -1.38
ZNF560-201ENST00000301480 VPS8Q8N3P4 1428 aa6.43□□□□□ -1.38
ZNF560-201ENST00000301480 SLC4A2P04920 1241 aa6.43□□□□□ -1.38
ZNF560-201ENST00000301480 TSPY4P0CV99 314 aa6.43□□□□□ -1.38
ZNF560-201ENST00000301480 TSPY10P0CW01 314 aa6.43□□□□□ -1.38
ZNF560-201ENST00000301480 CEBPAP49715 358 aaPredicted RBP6.43□□□□□ -1.38
ZNF560-201ENST00000301480 TEX2Q8IWB9 1127 aa6.43□□□□□ -1.38
ZNF560-201ENST00000301480 KCNG1Q9UIX4 513 aa6.43□□□□□ -1.38
ZNF560-201ENST00000301480 ZNF777Q9ULD5 760 aaPredicted RBP6.43□□□□□ -1.38
ZNF560-201ENST00000301480 LTBP4Q8N2S1 1624 aa6.42□□□□□ -1.38
ZNF560-201ENST00000301480 NCOA2Q15596 1464 aa6.42□□□□□ -1.38
ZNF560-201ENST00000301480 CEP170BQ9Y4F5 1589 aaPredicted RBP6.42□□□□□ -1.38
ZNF560-201ENST00000301480 CHRM1P11229 460 aaPredicted RBP6.42□□□□□ -1.38
ZNF560-201ENST00000301480 EIF2AK4Q9P2K8 1649 aaKnown RBP6.42□□□□□ -1.38
ZNF560-201ENST00000301480 CLSTN1O94985 981 aa6.42□□□□□ -1.38
ZNF560-201ENST00000301480 CAMSAP1Q5T5Y3 1602 aa6.41□□□□□ -1.38
ZNF560-201ENST00000301480 CPS1P31327 1500 aa6.41□□□□□ -1.38
ZNF560-201ENST00000301480 ZC3H13Q5T200 1668 aaKnown RBP6.41□□□□□ -1.38
ZNF560-201ENST00000301480 AKT1S1Q96B36 256 aa6.41□□□□□ -1.38
ZNF560-201ENST00000301480 PRDM16Q9HAZ2 1276 aa6.41□□□□□ -1.38
ZNF560-201ENST00000301480 MYO3AQ8NEV4 1616 aa6.41□□□□□ -1.38
ZNF560-201ENST00000301480 CAMSAP2Q08AD1 1489 aa6.41□□□□□ -1.38
ZNF560-201ENST00000301480 LRRC9Q6ZRR7 1453 aa6.41□□□□□ -1.38
ZNF560-201ENST00000301480 IPO4Q8TEX9 1081 aaKnown RBP6.41□□□□□ -1.38
ZNF560-201ENST00000301480 ZNF526Q8TF50 670 aaPredicted RBP6.41□□□□□ -1.38
ZNF560-201ENST00000301480 PSMD1Q99460 953 aa6.41□□□□□ -1.38
ZNF560-201ENST00000301480 MYOM3Q5VTT5 1437 aa6.41□□□□□ -1.38
ZNF560-201ENST00000301480 TNRQ92752 1358 aa6.4□□□□□ -1.38
ZNF560-201ENST00000301480 SHANK2Q9UPX8 1470 aa6.4□□□□□ -1.38
ZNF560-201ENST00000301480 THEMISQ8N1K5 641 aaPredicted RBP6.4□□□□□ -1.38
ZNF560-201ENST00000301480 RNF17Q9BXT8 1623 aaKnown RBP6.4□□□□□ -1.39
ZNF560-201ENST00000301480 MED14O60244 1454 aa6.4□□□□□ -1.39
ZNF560-201ENST00000301480 WWC1Q8IX03 1113 aa6.4□□□□□ -1.39
ZNF560-201ENST00000301480 CLTCQ00610 1675 aaKnown RBP6.4□□□□□ -1.39
ZNF560-201ENST00000301480 ARHGAP31Q2M1Z3 1444 aa6.39□□□□□ -1.39
ZNF560-201ENST00000301480 FAM43BQ6ZT52 329 aaPredicted RBP6.39□□□□□ -1.39
ZNF560-201ENST00000301480 DEPDC5O75140 1603 aa6.39□□□□□ -1.39
ZNF560-201ENST00000301480 GGT6Q6P531 493 aa6.38□□□□□ -1.39
ZNF560-201ENST00000301480 BBXQ8WY36 941 aaPredicted RBP6.38□□□□□ -1.39
ZNF560-201ENST00000301480 DUOX2Q9NRD8 1548 aa6.38□□□□□ -1.39
ZNF560-201ENST00000301480 ANKLE2Q86XL3 938 aa6.38□□□□□ -1.39
ZNF560-201ENST00000301480 DNMT1P26358 1616 aaKnown RBP6.38□□□□□ -1.39
ZNF560-201ENST00000301480 ERBINQ96RT1 1412 aa6.38□□□□□ -1.39
ZNF560-201ENST00000301480 WASHC2CQ9Y4E1 1318 aa6.38□□□□□ -1.39
ZNF560-201ENST00000301480 KIF3BO15066 747 aa6.37□□□□□ -1.39
ZNF560-201ENST00000301480 SPATA31D1Q6ZQQ2 1576 aa6.37□□□□□ -1.39
ZNF560-201ENST00000301480 ZBTB12Q9Y330 459 aaPredicted RBP6.37□□□□□ -1.39
ZNF560-201ENST00000301480 ZBTB7CA1YPR0 619 aa6.36□□□□□ -1.39
ZNF560-201ENST00000301480 C1orf115Q9H7X2 142 aa6.36□□□□□ -1.39
ZNF560-201ENST00000301480 ZNF644Q9H582 1327 aaPredicted RBP6.36□□□□□ -1.39
ZNF560-201ENST00000301480 ABCC3O15438 1527 aa6.36□□□□□ -1.39
ZNF560-201ENST00000301480 KDM5AP29375 1690 aaKnown RBP6.35□□□□□ -1.39
ZNF560-201ENST00000301480 LMTK2Q8IWU2 1503 aa6.35□□□□□ -1.39
ZNF560-201ENST00000301480 TOM1O60784 492 aa6.35□□□□□ -1.39
ZNF560-201ENST00000301480 FTSJ3Q8IY81 847 aaKnown RBP6.35□□□□□ -1.39
ZNF560-201ENST00000301480 PLCD4Q9BRC7 762 aa6.35□□□□□ -1.39
ZNF560-201ENST00000301480 KANK1Q14678 1352 aa6.35□□□□□ -1.39
ZNF560-201ENST00000301480 POLR1AO95602 1720 aaPredicted RBP6.34□□□□□ -1.39
ZNF560-201ENST00000301480 UGGT1Q9NYU2 1555 aa6.34□□□□□ -1.39
ZNF560-201ENST00000301480 NCKAP5LQ9HCH0 1330 aa6.34□□□□□ -1.39
ZNF560-201ENST00000301480 NPHP4O75161 1426 aaPredicted RBP6.34□□□□□ -1.39
ZNF560-201ENST00000301480 ERVK-7P63135 1459 aa6.34□□□□□ -1.39
ZNF560-201ENST00000301480 PRDM15P57071 1507 aaPredicted RBP6.34□□□□□ -1.39
ZNF560-201ENST00000301480 SYNMO15061 1565 aa6.34□□□□□ -1.4
ZNF560-201ENST00000301480 GTF2E1P29083 439 aaPredicted RBP6.33□□□□□ -1.4
ZNF560-201ENST00000301480 POLA2Q14181 598 aa6.33□□□□□ -1.4
ZNF560-201ENST00000301480 SLIT1O75093 1534 aa6.33□□□□□ -1.4
ZNF560-201ENST00000301480 ANKRD30AQ9BXX3 1397 aa6.33□□□□□ -1.4
ZNF560-201ENST00000301480 ARHGAP23Q9P227 1491 aa6.33□□□□□ -1.4
ZNF560-201ENST00000301480 NEURL4Q96JN8 1562 aa6.33□□□□□ -1.4
ZNF560-201ENST00000301480 FAM177A1Q8N128 213 aaPredicted RBP6.32□□□□□ -1.4
ZNF560-201ENST00000301480 RPRD2Q5VT52 1461 aaKnown RBP6.32□□□□□ -1.4
ZNF560-201ENST00000301480 ADGRL2O95490 1459 aa6.32□□□□□ -1.4
ZNF560-201ENST00000301480 TSHZ2Q9NRE2 1034 aa6.32□□□□□ -1.4
ZNF560-201ENST00000301480 VWDEQ8N2E2 1590 aa6.32□□□□□ -1.4
ZNF560-201ENST00000301480 KIF15Q9NS87 1388 aa6.32□□□□□ -1.4
ZNF560-201ENST00000301480 UBAP1LF5GYI3 381 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms