RNA–Protein interactions for RNA: ENST00000299299.3

PCBD1-201, Transcript of pterin-4 alpha-carbinolamine dehydratase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBD1, Length 1,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBD1-201ENST00000299299 TXNDC2Q86VQ3 553 aa20.22■□□□□ 0.83
PCBD1-201ENST00000299299 PCGF6Q9BYE7 350 aa20.21■□□□□ 0.83
PCBD1-201ENST00000299299 EID1Q9Y6B2 187 aa20.21■□□□□ 0.83
PCBD1-201ENST00000299299 LRRC7Q96NW7 1537 aa20.21■□□□□ 0.83
PCBD1-201ENST00000299299 SENP3Q9H4L4 574 aaPredicted RBP20.2■□□□□ 0.82
PCBD1-201ENST00000299299 SETD5Q9C0A6 1442 aa20.18■□□□□ 0.82
PCBD1-201ENST00000299299 TMEM131LA2VDJ0 1609 aa20.17■□□□□ 0.82
PCBD1-201ENST00000299299 ZFYVE9O95405 1425 aa20.17■□□□□ 0.82
PCBD1-201ENST00000299299 RIMS2Q9UQ26 1411 aa20.14■□□□□ 0.81
PCBD1-201ENST00000299299 SPHKAPQ2M3C7 1700 aa20.13■□□□□ 0.81
PCBD1-201ENST00000299299 RAB3GAP2Q9H2M9 1393 aa20.12■□□□□ 0.81
PCBD1-201ENST00000299299 CHGAP10645 457 aaKnown RBP20.12■□□□□ 0.81
PCBD1-201ENST00000299299 TRPM2O94759 1503 aa20.12■□□□□ 0.81
PCBD1-201ENST00000299299 PLEKHG1Q9ULL1 1385 aa20.09■□□□□ 0.81
PCBD1-201ENST00000299299 MYO5BQ9ULV0 1848 aa20.09■□□□□ 0.81
PCBD1-201ENST00000299299 PPP1R15AO75807 674 aaPredicted RBP20.09■□□□□ 0.81
PCBD1-201ENST00000299299 TRIM52Q96A61 297 aa20.09■□□□□ 0.81
PCBD1-201ENST00000299299 XIRP1Q702N8 1843 aaKnown RBP20.08■□□□□ 0.8
PCBD1-201ENST00000299299 CLTCL1P53675 1640 aa20.08■□□□□ 0.8
PCBD1-201ENST00000299299 SLC26A8Q96RN1 970 aa20.06■□□□□ 0.8
PCBD1-201ENST00000299299 HRCP23327 699 aa20.05■□□□□ 0.8
PCBD1-201ENST00000299299 NWD1Q149M9 1564 aa20.04■□□□□ 0.8
PCBD1-201ENST00000299299 BCANQ96GW7 911 aa20.04■□□□□ 0.8
PCBD1-201ENST00000299299 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
PCBD1-201ENST00000299299 NUTM2DQ5VT03 806 aaPredicted RBP20.03■□□□□ 0.8
PCBD1-201ENST00000299299 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.03■□□□□ 0.8
PCBD1-201ENST00000299299 HDGFP51858 240 aaKnown RBP20.02■□□□□ 0.8
PCBD1-201ENST00000299299 NKTRP30414 1462 aaKnown RBP20.02■□□□□ 0.8
PCBD1-201ENST00000299299 ADAMTS13Q76LX8 1427 aa20.01■□□□□ 0.79
PCBD1-201ENST00000299299 DIP2AQ14689 1571 aa20■□□□□ 0.79
PCBD1-201ENST00000299299 ACIN1Q9UKV3 1341 aaKnown RBP19.99■□□□□ 0.79
PCBD1-201ENST00000299299 KCNA6P17658 529 aa19.98■□□□□ 0.79
PCBD1-201ENST00000299299 FAM135BQ49AJ0 1406 aa19.98■□□□□ 0.79
PCBD1-201ENST00000299299 NEXMIFQ5QGS0 1516 aa19.97■□□□□ 0.79
PCBD1-201ENST00000299299 TMEM94Q12767 1356 aa19.97■□□□□ 0.79
PCBD1-201ENST00000299299 FOXD1Q16676 465 aa19.97■□□□□ 0.79
PCBD1-201ENST00000299299 ZNF326Q5BKZ1 582 aaKnown RBP19.97■□□□□ 0.79
PCBD1-201ENST00000299299 ROBO1Q9Y6N7 1651 aa19.96■□□□□ 0.79
PCBD1-201ENST00000299299 SETBP1Q9Y6X0 1596 aa19.95■□□□□ 0.78
PCBD1-201ENST00000299299 RGS17Q9UGC6 210 aaPredicted RBP19.95■□□□□ 0.78
PCBD1-201ENST00000299299 NRXN3Q9Y4C0 1643 aa19.94■□□□□ 0.78
PCBD1-201ENST00000299299 PROSER2Q86WR7 435 aaPredicted RBP19.93■□□□□ 0.78
PCBD1-201ENST00000299299 TBX22Q9Y458 520 aa19.93■□□□□ 0.78
PCBD1-201ENST00000299299 RBM33Q96EV2 1170 aaKnown RBP19.92■□□□□ 0.78
PCBD1-201ENST00000299299 MPHOSPH9Q99550 1183 aa19.92■□□□□ 0.78
PCBD1-201ENST00000299299 CCDC144AA2RUR9 1427 aa19.92■□□□□ 0.78
PCBD1-201ENST00000299299 PIK3R4Q99570 1358 aa19.91■□□□□ 0.78
PCBD1-201ENST00000299299 KIF1BO60333 1816 aa19.9■□□□□ 0.78
PCBD1-201ENST00000299299 PTPRUQ92729 1446 aa19.88■□□□□ 0.77
PCBD1-201ENST00000299299 MSH6P52701 1360 aa19.88■□□□□ 0.77
PCBD1-201ENST00000299299 CHD2O14647 1828 aaKnown RBP19.87■□□□□ 0.77
PCBD1-201ENST00000299299 PHLPP1O60346 1717 aa19.87■□□□□ 0.77
PCBD1-201ENST00000299299 DHX57Q6P158 1386 aaKnown RBP19.86■□□□□ 0.77
PCBD1-201ENST00000299299 POTEAQ6S8J7 498 aa19.86■□□□□ 0.77
PCBD1-201ENST00000299299 XRN1Q8IZH2 1706 aaKnown RBP19.85■□□□□ 0.77
PCBD1-201ENST00000299299 SPATA31E1Q6ZUB1 1445 aa19.85■□□□□ 0.77
PCBD1-201ENST00000299299 METP08581 1390 aa19.84■□□□□ 0.77
PCBD1-201ENST00000299299 RPGRIP1LQ68CZ1 1315 aa19.81■□□□□ 0.76
PCBD1-201ENST00000299299 AMOTL2Q9Y2J4 779 aa19.81■□□□□ 0.76
PCBD1-201ENST00000299299 NCOA3Q9Y6Q9 1424 aa19.81■□□□□ 0.76
PCBD1-201ENST00000299299 PPLO60437 1756 aa19.8■□□□□ 0.76
PCBD1-201ENST00000299299 SETD1AO15047 1707 aaKnown RBP19.8■□□□□ 0.76
PCBD1-201ENST00000299299 VGFO15240 615 aaPredicted RBP19.8■□□□□ 0.76
PCBD1-201ENST00000299299 JCADQ9P266 1359 aa19.8■□□□□ 0.76
PCBD1-201ENST00000299299 SLAIN2Q9P270 581 aa19.79■□□□□ 0.76
PCBD1-201ENST00000299299 C14orf37Q86TY3 774 aa19.78■□□□□ 0.76
PCBD1-201ENST00000299299 RGL3Q3MIN7 710 aa19.76■□□□□ 0.75
PCBD1-201ENST00000299299 COL16A1Q07092 1604 aaPredicted RBP19.76■□□□□ 0.75
PCBD1-201ENST00000299299 PTCH1Q13635 1447 aa19.75■□□□□ 0.75
PCBD1-201ENST00000299299 IFT172Q9UG01 1749 aa19.74■□□□□ 0.75
PCBD1-201ENST00000299299 ANKRD30BQ9BXX2 1392 aa19.74■□□□□ 0.75
PCBD1-201ENST00000299299 ADGRF5Q8IZF2 1346 aa19.74■□□□□ 0.75
PCBD1-201ENST00000299299 PIK3C2GO75747 1445 aa19.73■□□□□ 0.75
PCBD1-201ENST00000299299 DCCP43146 1447 aa19.73■□□□□ 0.75
PCBD1-201ENST00000299299 PRAG1Q86YV5 1406 aa19.73■□□□□ 0.75
PCBD1-201ENST00000299299 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.72■□□□□ 0.75
PCBD1-201ENST00000299299 ADGRL3Q9HAR2 1447 aa19.71■□□□□ 0.75
PCBD1-201ENST00000299299 MEX3CQ5U5Q3 659 aaKnown RBP19.71■□□□□ 0.75
PCBD1-201ENST00000299299 CADPS2Q86UW7 1296 aa19.7■□□□□ 0.74
PCBD1-201ENST00000299299 C19orf44Q9H6X5 657 aa19.7■□□□□ 0.74
PCBD1-201ENST00000299299 MYOM2P54296 1465 aa19.7■□□□□ 0.74
PCBD1-201ENST00000299299 ASXL1Q8IXJ9 1541 aa19.7■□□□□ 0.74
PCBD1-201ENST00000299299 SPATA31A6Q5VVP1 1343 aa19.7■□□□□ 0.74
PCBD1-201ENST00000299299 ROBO2Q9HCK4 1378 aa19.7■□□□□ 0.74
PCBD1-201ENST00000299299 ATF3P18847 181 aa19.69■□□□□ 0.74
PCBD1-201ENST00000299299 NALCNQ8IZF0 1738 aa19.68■□□□□ 0.74
PCBD1-201ENST00000299299 AHDC1Q5TGY3 1603 aaPredicted RBP19.68■□□□□ 0.74
PCBD1-201ENST00000299299 SHPRHQ149N8 1683 aa19.68■□□□□ 0.74
PCBD1-201ENST00000299299 NRXN1Q9ULB1 1477 aa19.67■□□□□ 0.74
PCBD1-201ENST00000299299 LRP6O75581 1613 aa19.67■□□□□ 0.74
PCBD1-201ENST00000299299 ZNF772Q68DY9 489 aaPredicted RBP19.67■□□□□ 0.74
PCBD1-201ENST00000299299 CCER1Q8TC90 406 aaPredicted RBP19.67■□□□□ 0.74
PCBD1-201ENST00000299299 MST1RQ04912 1400 aa19.66■□□□□ 0.74
PCBD1-201ENST00000299299 CLSPNQ9HAW4 1339 aa19.65■□□□□ 0.74
PCBD1-201ENST00000299299 TECPR2O15040 1411 aa19.63■□□□□ 0.73
PCBD1-201ENST00000299299 LRPPRCP42704 1394 aaKnown RBP19.61■□□□□ 0.73
PCBD1-201ENST00000299299 BRINP3Q76B58 766 aa19.6■□□□□ 0.73
PCBD1-201ENST00000299299 SIN3AQ96ST3 1273 aa19.6■□□□□ 0.73
PCBD1-201ENST00000299299 LAMC1P11047 1609 aa19.6■□□□□ 0.73
PCBD1-201ENST00000299299 KNDC1Q76NI1 1749 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms