RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 ANP32BQ92688 251 aaKnown RBP14.46□□□□□ -0.09
TRUB1-201ENST00000298746 EIF3AQ14152 1382 aaKnown RBP14.46□□□□□ -0.09
TRUB1-201ENST00000298746 PLB1Q6P1J6 1458 aa14.46□□□□□ -0.09
TRUB1-201ENST00000298746 PRAG1Q86YV5 1406 aa14.45□□□□□ -0.1
TRUB1-201ENST00000298746 CHMP5Q9NZZ3 219 aa14.45□□□□□ -0.1
TRUB1-201ENST00000298746 DMRT2Q9Y5R5 561 aa14.45□□□□□ -0.1
TRUB1-201ENST00000298746 HSP90AB1P08238 724 aaKnown RBP14.45□□□□□ -0.1
TRUB1-201ENST00000298746 C22orf23Q9BZE7 217 aa14.44□□□□□ -0.1
TRUB1-201ENST00000298746 JPH4Q96JJ6 628 aa14.44□□□□□ -0.1
TRUB1-201ENST00000298746 ARHGEF12Q9NZN5 1544 aa14.44□□□□□ -0.1
TRUB1-201ENST00000298746 USP19O94966 1318 aa14.44□□□□□ -0.1
TRUB1-201ENST00000298746 NKTRP30414 1462 aaKnown RBP14.44□□□□□ -0.1
TRUB1-201ENST00000298746 CHGAP10645 457 aaKnown RBP14.43□□□□□ -0.1
TRUB1-201ENST00000298746 AMER1Q5JTC6 1135 aaPredicted RBP14.43□□□□□ -0.1
TRUB1-201ENST00000298746 TNNQ9UQP3 1299 aa14.43□□□□□ -0.1
TRUB1-201ENST00000298746 MRE11P49959 708 aa14.43□□□□□ -0.1
TRUB1-201ENST00000298746 MORC1Q86VD1 984 aa14.42□□□□□ -0.1
TRUB1-201ENST00000298746 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
TRUB1-201ENST00000298746 TBC1D32Q96NH3 1257 aa14.42□□□□□ -0.1
TRUB1-201ENST00000298746 PCDHB15Q9Y5E8 787 aa14.42□□□□□ -0.1
TRUB1-201ENST00000298746 NCLP19338 710 aaKnown RBP14.41□□□□□ -0.1
TRUB1-201ENST00000298746 COL17A1Q9UMD9 1497 aaPredicted RBP14.4□□□□□ -0.1
TRUB1-201ENST00000298746 ITPRIPQ8IWB1 547 aa14.4□□□□□ -0.1
TRUB1-201ENST00000298746 WWC1Q8IX03 1113 aa14.4□□□□□ -0.1
TRUB1-201ENST00000298746 ZMYND15Q9H091 742 aa14.4□□□□□ -0.1
TRUB1-201ENST00000298746 GRPEL1Q9HAV7 217 aa14.4□□□□□ -0.1
TRUB1-201ENST00000298746 CARMIL2Q6F5E8 1435 aa14.39□□□□□ -0.11
TRUB1-201ENST00000298746 DDX11L8A8MPP1 907 aa14.39□□□□□ -0.11
TRUB1-201ENST00000298746 ESPNB1AK53 854 aa14.39□□□□□ -0.11
TRUB1-201ENST00000298746 SENP3Q9H4L4 574 aaPredicted RBP14.39□□□□□ -0.11
TRUB1-201ENST00000298746 ZNF521Q96K83 1311 aa14.38□□□□□ -0.11
TRUB1-201ENST00000298746 CLCN1P35523 988 aa14.38□□□□□ -0.11
TRUB1-201ENST00000298746 RLBP1P12271 317 aa14.38□□□□□ -0.11
TRUB1-201ENST00000298746 TCP11L2Q8N4U5 519 aa14.38□□□□□ -0.11
TRUB1-201ENST00000298746 ARID3AQ99856 593 aa14.38□□□□□ -0.11
TRUB1-201ENST00000298746 SMC4Q9NTJ3 1288 aa14.37□□□□□ -0.11
TRUB1-201ENST00000298746 RAPGEF6Q8TEU7 1601 aa14.37□□□□□ -0.11
TRUB1-201ENST00000298746 ADGRL2O95490 1459 aa14.37□□□□□ -0.11
TRUB1-201ENST00000298746 U2AF1L5P0DN76 240 aaPredicted RBP14.37□□□□□ -0.11
TRUB1-201ENST00000298746 RARSP54136 660 aaKnown RBP14.37□□□□□ -0.11
TRUB1-201ENST00000298746 U2AF1Q01081 240 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRUB1-201ENST00000298746 GBP4Q96PP9 640 aa14.37□□□□□ -0.11
TRUB1-201ENST00000298746 ANTXR1Q9H6X2 564 aa14.37□□□□□ -0.11
TRUB1-201ENST00000298746 GOLGA6L22H0YM25 854 aa14.36□□□□□ -0.11
TRUB1-201ENST00000298746 CFAP53Q96M91 514 aa14.36□□□□□ -0.11
TRUB1-201ENST00000298746 U2SURPO15042 1029 aaKnown RBP14.35□□□□□ -0.11
TRUB1-201ENST00000298746 RRP9O43818 475 aaKnown RBP14.35□□□□□ -0.11
TRUB1-201ENST00000298746 ZKSCAN2Q63HK3 967 aa14.34□□□□□ -0.11
TRUB1-201ENST00000298746 INSRP06213 1382 aa14.34□□□□□ -0.11
TRUB1-201ENST00000298746 RSPH4AQ5TD94 716 aa14.34□□□□□ -0.11
TRUB1-201ENST00000298746 MSNP26038 577 aaKnown RBP14.34□□□□□ -0.11
TRUB1-201ENST00000298746 DZIP1LQ8IYY4 767 aaKnown RBP14.34□□□□□ -0.11
TRUB1-201ENST00000298746 DISP1Q96F81 1524 aa14.34□□□□□ -0.11
TRUB1-201ENST00000298746 A2MP01023 1474 aa14.33□□□□□ -0.12
TRUB1-201ENST00000298746 RUNDC1Q96C34 613 aa14.33□□□□□ -0.12
TRUB1-201ENST00000298746 LNPKQ9C0E8 428 aa14.32□□□□□ -0.12
TRUB1-201ENST00000298746 MAGI2Q86UL8 1455 aa14.32□□□□□ -0.12
TRUB1-201ENST00000298746 ADGBQ8N7X0 1667 aa14.32□□□□□ -0.12
TRUB1-201ENST00000298746 ITSN2Q9NZM3 1697 aa14.32□□□□□ -0.12
TRUB1-201ENST00000298746 TRMT2AQ8IZ69 625 aaKnown RBP14.32□□□□□ -0.12
TRUB1-201ENST00000298746 FAM135AQ9P2D6 1515 aa14.32□□□□□ -0.12
TRUB1-201ENST00000298746 NGEFQ8N5V2 710 aa14.31□□□□□ -0.12
TRUB1-201ENST00000298746 KIAA0556O60303 1618 aa14.31□□□□□ -0.12
TRUB1-201ENST00000298746 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
TRUB1-201ENST00000298746 CFAP70Q5T0N1 1121 aa14.31□□□□□ -0.12
TRUB1-201ENST00000298746 TSR2Q969E8 191 aaKnown RBP14.31□□□□□ -0.12
TRUB1-201ENST00000298746 GPRASP1Q5JY77 1395 aa14.3□□□□□ -0.12
TRUB1-201ENST00000298746 ZBTB7CA1YPR0 619 aa14.3□□□□□ -0.12
TRUB1-201ENST00000298746 DDX49Q9Y6V7 483 aaKnown RBP14.3□□□□□ -0.12
TRUB1-201ENST00000298746 MVPQ14764 893 aaKnown RBP14.29□□□□□ -0.12
TRUB1-201ENST00000298746 FSD2A1L4K1 749 aa14.29□□□□□ -0.12
TRUB1-201ENST00000298746 MAGI1Q96QZ7 1491 aaPredicted RBP14.29□□□□□ -0.12
TRUB1-201ENST00000298746 MTHFSP49914 203 aa14.29□□□□□ -0.12
TRUB1-201ENST00000298746 NINLQ9Y2I6 1382 aa14.29□□□□□ -0.12
TRUB1-201ENST00000298746 RBM10P98175 930 aaKnown RBP14.28□□□□□ -0.12
TRUB1-201ENST00000298746 TRAK1Q9UPV9 953 aa14.28□□□□□ -0.12
TRUB1-201ENST00000298746 TNPO1Q92973 898 aaKnown RBP14.28□□□□□ -0.12
TRUB1-201ENST00000298746 ADAMTS12P58397 1594 aa14.28□□□□□ -0.12
TRUB1-201ENST00000298746 KIAA1211Q6ZU35 1233 aa14.28□□□□□ -0.12
TRUB1-201ENST00000298746 KDM5DQ9BY66 1539 aa14.27□□□□□ -0.13
TRUB1-201ENST00000298746 AAMPQ13685 434 aa14.27□□□□□ -0.13
TRUB1-201ENST00000298746 CEP170Q5SW79 1584 aa14.27□□□□□ -0.13
TRUB1-201ENST00000298746 NASPP49321 788 aaPredicted RBP14.27□□□□□ -0.13
TRUB1-201ENST00000298746 FAM13BQ9NYF5 915 aa14.27□□□□□ -0.13
TRUB1-201ENST00000298746 SLC12A5Q9H2X9 1139 aa14.26□□□□□ -0.13
TRUB1-201ENST00000298746 ASXL1Q8IXJ9 1541 aa14.26□□□□□ -0.13
TRUB1-201ENST00000298746 CCDC141Q6ZP82 1450 aa14.26□□□□□ -0.13
TRUB1-201ENST00000298746 E9PCH4 1651 aa14.26□□□□□ -0.13
TRUB1-201ENST00000298746 EXOSC9Q06265 439 aaKnown RBP14.25□□□□□ -0.13
TRUB1-201ENST00000298746 SAFB2Q14151 953 aaKnown RBP eCLIP14.25□□□□□ -0.13
TRUB1-201ENST00000298746 SKOR2Q2VWA4 1001 aaPredicted RBP14.25□□□□□ -0.13
TRUB1-201ENST00000298746 ANKRD45Q5TZF3 282 aa14.25□□□□□ -0.13
TRUB1-201ENST00000298746 CARD14Q9BXL6 1004 aa14.25□□□□□ -0.13
TRUB1-201ENST00000298746 DDX19BQ9UMR2 479 aa14.25□□□□□ -0.13
TRUB1-201ENST00000298746 PIK3C2GO75747 1445 aa14.25□□□□□ -0.13
TRUB1-201ENST00000298746 WDR7Q9Y4E6 1490 aa14.24□□□□□ -0.13
TRUB1-201ENST00000298746 PBRM1Q86U86 1689 aa14.24□□□□□ -0.13
TRUB1-201ENST00000298746 SLC24A1O60721 1099 aa14.24□□□□□ -0.13
TRUB1-201ENST00000298746 TRPM1Q7Z4N2 1603 aa14.23□□□□□ -0.13
TRUB1-201ENST00000298746 GRIN2AQ12879 1464 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms