RNA–Protein interactions for RNA: ENST00000296550.11

DCLK2-201, Transcript of doublecortin like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK2, Length 4,265 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK2-201ENST00000296550 FAM69CQ0P6D2 419 aa20.76■□□□□ 0.91
DCLK2-201ENST00000296550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.75■□□□□ 0.91
DCLK2-201ENST00000296550 ANP32BQ92688 251 aaKnown RBP20.73■□□□□ 0.91
DCLK2-201ENST00000296550 RUNDC1Q96C34 613 aa20.73■□□□□ 0.91
DCLK2-201ENST00000296550 SLC12A5Q9H2X9 1139 aa20.73■□□□□ 0.91
DCLK2-201ENST00000296550 SPRYD3Q8NCJ5 442 aa20.73■□□□□ 0.91
DCLK2-201ENST00000296550 SLKQ9H2G2 1235 aaPredicted RBP20.73■□□□□ 0.91
DCLK2-201ENST00000296550 RALGAPBQ86X10 1494 aa20.72■□□□□ 0.91
DCLK2-201ENST00000296550 DNMT1P26358 1616 aaKnown RBP20.72■□□□□ 0.91
DCLK2-201ENST00000296550 MTHFSP49914 203 aa20.71■□□□□ 0.91
DCLK2-201ENST00000296550 NUTM2FA1L443 756 aa20.71■□□□□ 0.91
DCLK2-201ENST00000296550 TARBP1Q13395 1621 aaKnown RBP20.71■□□□□ 0.91
DCLK2-201ENST00000296550 ITSN2Q9NZM3 1697 aa20.71■□□□□ 0.91
DCLK2-201ENST00000296550 TEX14Q8IWB6 1497 aa20.7■□□□□ 0.9
DCLK2-201ENST00000296550 PAK3O75914 559 aaPredicted RBP20.7■□□□□ 0.9
DCLK2-201ENST00000296550 PBRM1Q86U86 1689 aa20.69■□□□□ 0.9
DCLK2-201ENST00000296550 CABP2Q9NPB3 220 aa20.69■□□□□ 0.9
DCLK2-201ENST00000296550 IL27Q8NEV9 243 aa20.69■□□□□ 0.9
DCLK2-201ENST00000296550 DISP3Q9P2K9 1392 aa20.69■□□□□ 0.9
DCLK2-201ENST00000296550 TCP11L2Q8N4U5 519 aa20.68■□□□□ 0.9
DCLK2-201ENST00000296550 PANK1Q8TE04 598 aa20.68■□□□□ 0.9
DCLK2-201ENST00000296550 DHX29Q7Z478 1369 aaKnown RBP20.67■□□□□ 0.9
DCLK2-201ENST00000296550 CALD1Q05682 793 aaKnown RBP20.67■□□□□ 0.9
DCLK2-201ENST00000296550 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
DCLK2-201ENST00000296550 ZKSCAN2Q63HK3 967 aa20.67■□□□□ 0.9
DCLK2-201ENST00000296550 GGNBP2Q9H3C7 697 aa20.67■□□□□ 0.9
DCLK2-201ENST00000296550 BCAR3O75815 825 aa20.65■□□□□ 0.9
DCLK2-201ENST00000296550 RAPGEF3O95398 923 aa20.65■□□□□ 0.9
DCLK2-201ENST00000296550 HSCBQ8IWL3 235 aa20.65■□□□□ 0.9
DCLK2-201ENST00000296550 HSP90AB1P08238 724 aaKnown RBP20.64■□□□□ 0.89
DCLK2-201ENST00000296550 MFAP1P55081 439 aaKnown RBP20.63■□□□□ 0.89
DCLK2-201ENST00000296550 BACH2Q9BYV9 841 aa20.63■□□□□ 0.89
DCLK2-201ENST00000296550 KDM6BO15054 1643 aa20.63■□□□□ 0.89
DCLK2-201ENST00000296550 NUP160Q12769 1436 aa20.63■□□□□ 0.89
DCLK2-201ENST00000296550 PRAG1Q86YV5 1406 aa20.62■□□□□ 0.89
DCLK2-201ENST00000296550 USP35Q9P2H5 1018 aa20.62■□□□□ 0.89
DCLK2-201ENST00000296550 ELL2O00472 640 aaPredicted RBP20.62■□□□□ 0.89
DCLK2-201ENST00000296550 GOLGA6L22H0YM25 854 aa20.61■□□□□ 0.89
DCLK2-201ENST00000296550 DIAPH1O60610 1272 aaKnown RBP20.61■□□□□ 0.89
DCLK2-201ENST00000296550 ADGRL2O95490 1459 aa20.61■□□□□ 0.89
DCLK2-201ENST00000296550 CASC1Q6TDU7 716 aa20.61■□□□□ 0.89
DCLK2-201ENST00000296550 SYCP2Q9BX26 1530 aa20.6■□□□□ 0.89
DCLK2-201ENST00000296550 FAM135AQ9P2D6 1515 aa20.6■□□□□ 0.89
DCLK2-201ENST00000296550 ADGRF5Q8IZF2 1346 aa20.6■□□□□ 0.89
DCLK2-201ENST00000296550 GCC2Q8IWJ2 1684 aa20.6■□□□□ 0.89
DCLK2-201ENST00000296550 HAP1P54257 671 aaPredicted RBP20.6■□□□□ 0.89
DCLK2-201ENST00000296550 RIPK4P57078 832 aa20.6■□□□□ 0.89
DCLK2-201ENST00000296550 TESK2Q96S53 571 aa20.6■□□□□ 0.89
DCLK2-201ENST00000296550 C20orf194Q5TEA3 1177 aa20.59■□□□□ 0.89
DCLK2-201ENST00000296550 EID1Q9Y6B2 187 aa20.59■□□□□ 0.89
DCLK2-201ENST00000296550 SHANK2Q9UPX8 1470 aa20.59■□□□□ 0.89
DCLK2-201ENST00000296550 DZIP1LQ8IYY4 767 aaKnown RBP20.59■□□□□ 0.89
DCLK2-201ENST00000296550 SLFN5Q08AF3 891 aa20.58■□□□□ 0.89
DCLK2-201ENST00000296550 SPATA31E1Q6ZUB1 1445 aa20.58■□□□□ 0.89
DCLK2-201ENST00000296550 APBB1O00213 710 aa20.58■□□□□ 0.89
DCLK2-201ENST00000296550 SKAP1Q86WV1 359 aa20.57■□□□□ 0.88
DCLK2-201ENST00000296550 RTF1Q92541 710 aaKnown RBP20.56■□□□□ 0.88
DCLK2-201ENST00000296550 A0A0G2JS52 829 aa20.56■□□□□ 0.88
DCLK2-201ENST00000296550 PARD3Q8TEW0 1356 aa20.55■□□□□ 0.88
DCLK2-201ENST00000296550 PLCH2O75038 1416 aa20.55■□□□□ 0.88
DCLK2-201ENST00000296550 UHRF1BP1Q6BDS2 1440 aa20.55■□□□□ 0.88
DCLK2-201ENST00000296550 PDE3AQ14432 1141 aa20.55■□□□□ 0.88
DCLK2-201ENST00000296550 ARHGEF12Q9NZN5 1544 aa20.54■□□□□ 0.88
DCLK2-201ENST00000296550 PER1O15534 1290 aaPredicted RBP20.54■□□□□ 0.88
DCLK2-201ENST00000296550 NGDNQ8NEJ9 315 aaKnown RBP20.54■□□□□ 0.88
DCLK2-201ENST00000296550 NCLP19338 710 aaKnown RBP20.54■□□□□ 0.88
DCLK2-201ENST00000296550 SCAF11Q99590 1463 aaKnown RBP20.53■□□□□ 0.88
DCLK2-201ENST00000296550 LMOD3Q0VAK6 560 aa20.53■□□□□ 0.88
DCLK2-201ENST00000296550 ADGRL1O94910 1474 aa20.52■□□□□ 0.88
DCLK2-201ENST00000296550 DDX19BQ9UMR2 479 aa20.52■□□□□ 0.88
DCLK2-201ENST00000296550 COG3Q96JB2 828 aa20.52■□□□□ 0.88
DCLK2-201ENST00000296550 DUSP27Q5VZP5 1158 aa20.52■□□□□ 0.87
DCLK2-201ENST00000296550 PRAM1Q96QH2 718 aa20.52■□□□□ 0.87
DCLK2-201ENST00000296550 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
DCLK2-201ENST00000296550 AMER1Q5JTC6 1135 aaPredicted RBP20.5■□□□□ 0.87
DCLK2-201ENST00000296550 TRAPPC8Q9Y2L5 1435 aa20.5■□□□□ 0.87
DCLK2-201ENST00000296550 NSD3Q9BZ95 1437 aa20.5■□□□□ 0.87
DCLK2-201ENST00000296550 CEP170Q5SW79 1584 aa20.5■□□□□ 0.87
DCLK2-201ENST00000296550 RPGRIP1LQ68CZ1 1315 aa20.49■□□□□ 0.87
DCLK2-201ENST00000296550 TRIM44Q96DX7 344 aaPredicted RBP20.49■□□□□ 0.87
DCLK2-201ENST00000296550 DUOX2Q9NRD8 1548 aa20.49■□□□□ 0.87
DCLK2-201ENST00000296550 HMOX1P09601 288 aa20.49■□□□□ 0.87
DCLK2-201ENST00000296550 SLC52A1Q9NWF4 448 aa20.48■□□□□ 0.87
DCLK2-201ENST00000296550 FANCAO15360 1455 aa20.48■□□□□ 0.87
DCLK2-201ENST00000296550 TSR2Q969E8 191 aaKnown RBP20.48■□□□□ 0.87
DCLK2-201ENST00000296550 GZF1Q9H116 711 aaPredicted RBP20.48■□□□□ 0.87
DCLK2-201ENST00000296550 EXOSC9Q06265 439 aaKnown RBP20.47■□□□□ 0.87
DCLK2-201ENST00000296550 AAMPQ13685 434 aa20.47■□□□□ 0.87
DCLK2-201ENST00000296550 ANKRD45Q5TZF3 282 aa20.47■□□□□ 0.87
DCLK2-201ENST00000296550 WDR63Q8IWG1 891 aa20.45■□□□□ 0.86
DCLK2-201ENST00000296550 GSE1Q14687 1217 aa20.45■□□□□ 0.86
DCLK2-201ENST00000296550 AMPHP49418 695 aa20.43■□□□□ 0.86
DCLK2-201ENST00000296550 NFKBIBQ15653 356 aa20.43■□□□□ 0.86
DCLK2-201ENST00000296550 LRPPRCP42704 1394 aaKnown RBP20.43■□□□□ 0.86
DCLK2-201ENST00000296550 KIF16BQ96L93 1317 aa20.43■□□□□ 0.86
DCLK2-201ENST00000296550 L1TD1Q5T7N2 865 aaKnown RBP20.43■□□□□ 0.86
DCLK2-201ENST00000296550 SLC4A10Q6U841 1118 aa20.43■□□□□ 0.86
DCLK2-201ENST00000296550 LTV1Q96GA3 475 aaPredicted RBP20.43■□□□□ 0.86
DCLK2-201ENST00000296550 A2MP01023 1474 aa20.43■□□□□ 0.86
DCLK2-201ENST00000296550 CD109Q6YHK3 1445 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms