RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 SCAF11Q99590 1463 aaKnown RBP17.83■□□□□ 0.45
PPP1CB-201ENST00000296122 RICTORQ6R327 1708 aa17.83■□□□□ 0.44
PPP1CB-201ENST00000296122 RALBP1Q15311 655 aa17.83■□□□□ 0.44
PPP1CB-201ENST00000296122 KTN1Q86UP2 1357 aaKnown RBP17.83■□□□□ 0.44
PPP1CB-201ENST00000296122 POGKQ9P215 609 aa17.82■□□□□ 0.44
PPP1CB-201ENST00000296122 STK26Q9P289 416 aa17.82■□□□□ 0.44
PPP1CB-201ENST00000296122 PPRC1Q5VV67 1664 aaKnown RBP17.82■□□□□ 0.44
PPP1CB-201ENST00000296122 MROH1Q8NDA8 1641 aa17.82■□□□□ 0.44
PPP1CB-201ENST00000296122 CENPJQ9HC77 1338 aaPredicted RBP17.82■□□□□ 0.44
PPP1CB-201ENST00000296122 ZMYM4Q5VZL5 1548 aa17.81■□□□□ 0.44
PPP1CB-201ENST00000296122 TMEM132EQ6IEE7 984 aa17.81■□□□□ 0.44
PPP1CB-201ENST00000296122 PANK3Q9H999 370 aa17.81■□□□□ 0.44
PPP1CB-201ENST00000296122 ARHGAP31Q2M1Z3 1444 aa17.81■□□□□ 0.44
PPP1CB-201ENST00000296122 CC2D1BQ5T0F9 858 aaKnown RBP17.8■□□□□ 0.44
PPP1CB-201ENST00000296122 KIF1BO60333 1816 aa17.79■□□□□ 0.44
PPP1CB-201ENST00000296122 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
PPP1CB-201ENST00000296122 C14orf93Q9H972 538 aaKnown RBP17.78■□□□□ 0.44
PPP1CB-201ENST00000296122 SAFB2Q14151 953 aaKnown RBP eCLIP17.78■□□□□ 0.44
PPP1CB-201ENST00000296122 TESK2Q96S53 571 aa17.78■□□□□ 0.44
PPP1CB-201ENST00000296122 TRPM1Q7Z4N2 1603 aa17.77■□□□□ 0.44
PPP1CB-201ENST00000296122 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.77■□□□□ 0.44
PPP1CB-201ENST00000296122 MYOM2P54296 1465 aa17.76■□□□□ 0.43
PPP1CB-201ENST00000296122 CAMSAP1Q5T5Y3 1602 aa17.75■□□□□ 0.43
PPP1CB-201ENST00000296122 DISP3Q9P2K9 1392 aa17.75■□□□□ 0.43
PPP1CB-201ENST00000296122 PELP1Q8IZL8 1130 aaKnown RBP17.74■□□□□ 0.43
PPP1CB-201ENST00000296122 MYBBP1AQ9BQG0 1328 aaKnown RBP17.74■□□□□ 0.43
PPP1CB-201ENST00000296122 AGLP35573 1532 aa17.73■□□□□ 0.43
PPP1CB-201ENST00000296122 ZMYM3Q14202 1370 aa17.73■□□□□ 0.43
PPP1CB-201ENST00000296122 SRPK2P78362 688 aaKnown RBP17.72■□□□□ 0.43
PPP1CB-201ENST00000296122 COL17A1Q9UMD9 1497 aaPredicted RBP17.72■□□□□ 0.43
PPP1CB-201ENST00000296122 NLRP13Q86W25 1043 aa17.72■□□□□ 0.43
PPP1CB-201ENST00000296122 EVC2Q86UK5 1308 aa17.72■□□□□ 0.43
PPP1CB-201ENST00000296122 ZC3H13Q5T200 1668 aaKnown RBP17.71■□□□□ 0.43
PPP1CB-201ENST00000296122 EID1Q9Y6B2 187 aa17.71■□□□□ 0.42
PPP1CB-201ENST00000296122 MADDQ8WXG6 1647 aa17.7■□□□□ 0.42
PPP1CB-201ENST00000296122 ADGRB3O60242 1522 aa17.7■□□□□ 0.42
PPP1CB-201ENST00000296122 ERVK-7P63135 1459 aa17.69■□□□□ 0.42
PPP1CB-201ENST00000296122 TNRQ92752 1358 aa17.69■□□□□ 0.42
PPP1CB-201ENST00000296122 ARHGEF40Q8TER5 1519 aa17.68■□□□□ 0.42
PPP1CB-201ENST00000296122 NEURL4Q96JN8 1562 aa17.68■□□□□ 0.42
PPP1CB-201ENST00000296122 BCORL1Q5H9F3 1711 aa17.68■□□□□ 0.42
PPP1CB-201ENST00000296122 WDR43Q15061 677 aaKnown RBP eCLIP17.67■□□□□ 0.42
PPP1CB-201ENST00000296122 LAMC1P11047 1609 aa17.66■□□□□ 0.42
PPP1CB-201ENST00000296122 CCDC184Q52MB2 194 aa17.66■□□□□ 0.42
PPP1CB-201ENST00000296122 REREQ9P2R6 1566 aa17.65■□□□□ 0.42
PPP1CB-201ENST00000296122 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
PPP1CB-201ENST00000296122 PIK3C2GO75747 1445 aa17.64■□□□□ 0.42
PPP1CB-201ENST00000296122 MINK1Q8N4C8 1332 aaPredicted RBP17.64■□□□□ 0.41
PPP1CB-201ENST00000296122 CEBPAP49715 358 aaPredicted RBP17.64■□□□□ 0.41
PPP1CB-201ENST00000296122 BRD4O60885 1362 aaPredicted RBP17.63■□□□□ 0.41
PPP1CB-201ENST00000296122 PRAM1Q96QH2 718 aa17.63■□□□□ 0.41
PPP1CB-201ENST00000296122 RIMS2Q9UQ26 1411 aa17.62■□□□□ 0.41
PPP1CB-201ENST00000296122 DNAJC5Q9H3Z4 198 aa17.61■□□□□ 0.41
PPP1CB-201ENST00000296122 SYNMO15061 1565 aa17.6■□□□□ 0.41
PPP1CB-201ENST00000296122 MORC1Q86VD1 984 aa17.6■□□□□ 0.41
PPP1CB-201ENST00000296122 TXNDC2Q86VQ3 553 aa17.6■□□□□ 0.41
PPP1CB-201ENST00000296122 POLR1AO95602 1720 aaPredicted RBP17.6■□□□□ 0.41
PPP1CB-201ENST00000296122 TERF2IPQ9NYB0 399 aa17.59■□□□□ 0.41
PPP1CB-201ENST00000296122 SALL2Q9Y467 1007 aaPredicted RBP17.59■□□□□ 0.41
PPP1CB-201ENST00000296122 CLTCQ00610 1675 aaKnown RBP17.59■□□□□ 0.41
PPP1CB-201ENST00000296122 THEMISQ8N1K5 641 aaPredicted RBP17.59■□□□□ 0.41
PPP1CB-201ENST00000296122 ZFYVE9O95405 1425 aa17.58■□□□□ 0.41
PPP1CB-201ENST00000296122 HDGFL2Q7Z4V5 671 aaPredicted RBP17.58■□□□□ 0.41
PPP1CB-201ENST00000296122 CABP2Q9NPB3 220 aa17.58■□□□□ 0.41
PPP1CB-201ENST00000296122 PER1O15534 1290 aaPredicted RBP17.57■□□□□ 0.4
PPP1CB-201ENST00000296122 SLC12A5Q9H2X9 1139 aa17.57■□□□□ 0.4
PPP1CB-201ENST00000296122 SBNO2Q9Y2G9 1366 aa17.57■□□□□ 0.4
PPP1CB-201ENST00000296122 MROH2AA6NES4 1674 aa17.57■□□□□ 0.4
PPP1CB-201ENST00000296122 PREX1Q8TCU6 1659 aa17.57■□□□□ 0.4
PPP1CB-201ENST00000296122 KIAA1210Q9ULL0 1709 aa17.57■□□□□ 0.4
PPP1CB-201ENST00000296122 NRXN1Q9ULB1 1477 aa17.56■□□□□ 0.4
PPP1CB-201ENST00000296122 TNNT2P45379 298 aaPredicted RBP17.56■□□□□ 0.4
PPP1CB-201ENST00000296122 CGNL1Q0VF96 1302 aa17.56■□□□□ 0.4
PPP1CB-201ENST00000296122 FKBP8Q14318 412 aa17.55■□□□□ 0.4
PPP1CB-201ENST00000296122 SENP3-EIF4A1A0A087X0R7 540 aa17.55■□□□□ 0.4
PPP1CB-201ENST00000296122 CFAP53Q96M91 514 aa17.55■□□□□ 0.4
PPP1CB-201ENST00000296122 ZBED9Q6R2W3 1325 aa17.55■□□□□ 0.4
PPP1CB-201ENST00000296122 PNISRQ8TF01 805 aaKnown RBP17.55■□□□□ 0.4
PPP1CB-201ENST00000296122 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
PPP1CB-201ENST00000296122 YTHDC2Q9H6S0 1430 aaKnown RBP17.53■□□□□ 0.4
PPP1CB-201ENST00000296122 NEXMIFQ5QGS0 1516 aa17.53■□□□□ 0.4
PPP1CB-201ENST00000296122 PARD3Q8TEW0 1356 aa17.52■□□□□ 0.4
PPP1CB-201ENST00000296122 A2ML1A8K2U0 1454 aa17.52■□□□□ 0.4
PPP1CB-201ENST00000296122 ATAD2Q6PL18 1390 aa17.52■□□□□ 0.4
PPP1CB-201ENST00000296122 PUS7Q96PZ0 661 aaKnown RBP17.51■□□□□ 0.39
PPP1CB-201ENST00000296122 PIK3C2BO00750 1634 aa17.51■□□□□ 0.39
PPP1CB-201ENST00000296122 IQGAP1P46940 1657 aa17.51■□□□□ 0.39
PPP1CB-201ENST00000296122 PPP2R1AP30153 589 aa17.51■□□□□ 0.39
PPP1CB-201ENST00000296122 SIGLEC1Q9BZZ2 1709 aa17.51■□□□□ 0.39
PPP1CB-201ENST00000296122 PPLO60437 1756 aa17.5■□□□□ 0.39
PPP1CB-201ENST00000296122 CDK19Q9BWU1 502 aa17.5■□□□□ 0.39
PPP1CB-201ENST00000296122 SPATA31D1Q6ZQQ2 1576 aa17.49■□□□□ 0.39
PPP1CB-201ENST00000296122 AMER1Q5JTC6 1135 aaPredicted RBP17.49■□□□□ 0.39
PPP1CB-201ENST00000296122 WAPLQ7Z5K2 1190 aa17.49■□□□□ 0.39
PPP1CB-201ENST00000296122 SUPT16HQ9Y5B9 1047 aaKnown RBP17.49■□□□□ 0.39
PPP1CB-201ENST00000296122 TMEM2Q9UHN6 1383 aa17.49■□□□□ 0.39
PPP1CB-201ENST00000296122 SLC26A8Q96RN1 970 aa17.48■□□□□ 0.39
PPP1CB-201ENST00000296122 KDM5AP29375 1690 aaKnown RBP17.48■□□□□ 0.39
PPP1CB-201ENST00000296122 NSD3Q9BZ95 1437 aa17.48■□□□□ 0.39
PPP1CB-201ENST00000296122 ASXL1Q8IXJ9 1541 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms