RNA–Protein interactions for RNA: ENST00000295598.9

ATP1A1-201, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP1A1, Length 3,654 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-201ENST00000295598 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
ATP1A1-201ENST00000295598 ABCC2Q92887 1545 aa16.92■□□□□ 0.3
ATP1A1-201ENST00000295598 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
ATP1A1-201ENST00000295598 CANXP27824 592 aaKnown RBP16.91■□□□□ 0.3
ATP1A1-201ENST00000295598 CLUAP1Q96AJ1 413 aa16.91■□□□□ 0.3
ATP1A1-201ENST00000295598 PDE3BQ13370 1112 aa16.9■□□□□ 0.3
ATP1A1-201ENST00000295598 TNNQ9UQP3 1299 aa16.9■□□□□ 0.3
ATP1A1-201ENST00000295598 PANK1Q8TE04 598 aa16.89■□□□□ 0.29
ATP1A1-201ENST00000295598 DUOX2Q9NRD8 1548 aa16.88■□□□□ 0.29
ATP1A1-201ENST00000295598 NPM1P06748 294 aaKnown RBP eCLIP16.88■□□□□ 0.29
ATP1A1-201ENST00000295598 RTL5Q5HYW3 569 aaPredicted RBP16.88■□□□□ 0.29
ATP1A1-201ENST00000295598 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
ATP1A1-201ENST00000295598 BACH2Q9BYV9 841 aa16.87■□□□□ 0.29
ATP1A1-201ENST00000295598 KANK1Q14678 1352 aa16.87■□□□□ 0.29
ATP1A1-201ENST00000295598 WDR7Q9Y4E6 1490 aa16.87■□□□□ 0.29
ATP1A1-201ENST00000295598 CABP2Q9NPB3 220 aa16.87■□□□□ 0.29
ATP1A1-201ENST00000295598 COG6Q9Y2V7 657 aa16.87■□□□□ 0.29
ATP1A1-201ENST00000295598 ATP10AO60312 1499 aa16.87■□□□□ 0.29
ATP1A1-201ENST00000295598 FBLN1P23142 703 aa16.86■□□□□ 0.29
ATP1A1-201ENST00000295598 WASHC2CQ9Y4E1 1318 aa16.86■□□□□ 0.29
ATP1A1-201ENST00000295598 TCERG1O14776 1098 aaKnown RBP16.85■□□□□ 0.29
ATP1A1-201ENST00000295598 FANCAO15360 1455 aa16.85■□□□□ 0.29
ATP1A1-201ENST00000295598 CDCA8Q53HL2 280 aa16.84■□□□□ 0.29
ATP1A1-201ENST00000295598 NEFMP07197 916 aa16.84■□□□□ 0.29
ATP1A1-201ENST00000295598 MYO5CQ9NQX4 1742 aa16.83■□□□□ 0.29
ATP1A1-201ENST00000295598 RTN4Q9NQC3 1192 aaKnown RBP16.83■□□□□ 0.28
ATP1A1-201ENST00000295598 PRDM15P57071 1507 aaPredicted RBP16.83■□□□□ 0.28
ATP1A1-201ENST00000295598 ZCCHC11Q5TAX3 1644 aaKnown RBP16.83■□□□□ 0.28
ATP1A1-201ENST00000295598 PPM1GO15355 546 aaPredicted RBP16.82■□□□□ 0.28
ATP1A1-201ENST00000295598 SLFN5Q08AF3 891 aa16.82■□□□□ 0.28
ATP1A1-201ENST00000295598 ADGRL1O94910 1474 aa16.82■□□□□ 0.28
ATP1A1-201ENST00000295598 MTHFSP49914 203 aa16.81■□□□□ 0.28
ATP1A1-201ENST00000295598 MAST1Q9Y2H9 1570 aa16.81■□□□□ 0.28
ATP1A1-201ENST00000295598 U2SURPO15042 1029 aaKnown RBP16.81■□□□□ 0.28
ATP1A1-201ENST00000295598 NOS1P29475 1434 aa16.81■□□□□ 0.28
ATP1A1-201ENST00000295598 MLECQ14165 292 aa16.81■□□□□ 0.28
ATP1A1-201ENST00000295598 SCAF11Q99590 1463 aaKnown RBP16.8■□□□□ 0.28
ATP1A1-201ENST00000295598 CENPJQ9HC77 1338 aaPredicted RBP16.8■□□□□ 0.28
ATP1A1-201ENST00000295598 IGHDP01880 384 aa16.8■□□□□ 0.28
ATP1A1-201ENST00000295598 GGNBP2Q9H3C7 697 aa16.79■□□□□ 0.28
ATP1A1-201ENST00000295598 UNC13BO14795 1591 aa16.79■□□□□ 0.28
ATP1A1-201ENST00000295598 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
ATP1A1-201ENST00000295598 U2AF1L5P0DN76 240 aaPredicted RBP16.78■□□□□ 0.28
ATP1A1-201ENST00000295598 U2AF1Q01081 240 aaKnown RBP eCLIP16.78■□□□□ 0.28
ATP1A1-201ENST00000295598 BLMP54132 1417 aaPredicted RBP16.78■□□□□ 0.28
ATP1A1-201ENST00000295598 ABCC1P33527 1531 aa16.78■□□□□ 0.28
ATP1A1-201ENST00000295598 SRPK2P78362 688 aaKnown RBP16.78■□□□□ 0.28
ATP1A1-201ENST00000295598 IQGAP3Q86VI3 1631 aa16.78■□□□□ 0.28
ATP1A1-201ENST00000295598 MINK1Q8N4C8 1332 aaPredicted RBP16.78■□□□□ 0.28
ATP1A1-201ENST00000295598 E9PCH4 1651 aa16.77■□□□□ 0.28
ATP1A1-201ENST00000295598 TCP11L2Q8N4U5 519 aa16.77■□□□□ 0.27
ATP1A1-201ENST00000295598 TSR2Q969E8 191 aaKnown RBP16.76■□□□□ 0.27
ATP1A1-201ENST00000295598 CLTCL1P53675 1640 aa16.76■□□□□ 0.27
ATP1A1-201ENST00000295598 ASXL2Q76L83 1435 aa16.76■□□□□ 0.27
ATP1A1-201ENST00000295598 WWC1Q8IX03 1113 aa16.75■□□□□ 0.27
ATP1A1-201ENST00000295598 DAXXQ9UER7 740 aaPredicted RBP16.75■□□□□ 0.27
ATP1A1-201ENST00000295598 NSD3Q9BZ95 1437 aa16.75■□□□□ 0.27
ATP1A1-201ENST00000295598 FBXO31Q5XUX0 539 aaPredicted RBP16.74■□□□□ 0.27
ATP1A1-201ENST00000295598 EIF3AQ14152 1382 aaKnown RBP16.74■□□□□ 0.27
ATP1A1-201ENST00000295598 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.73■□□□□ 0.27
ATP1A1-201ENST00000295598 ZNF521Q96K83 1311 aa16.73■□□□□ 0.27
ATP1A1-201ENST00000295598 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
ATP1A1-201ENST00000295598 SPRYD3Q8NCJ5 442 aa16.73■□□□□ 0.27
ATP1A1-201ENST00000295598 RLBP1P12271 317 aa16.72■□□□□ 0.27
ATP1A1-201ENST00000295598 ZFYVE16Q7Z3T8 1539 aa16.72■□□□□ 0.27
ATP1A1-201ENST00000295598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATP1A1-201ENST00000295598 SEC24BO95487 1268 aa16.71■□□□□ 0.27
ATP1A1-201ENST00000295598 ASXL1Q8IXJ9 1541 aa16.71■□□□□ 0.27
ATP1A1-201ENST00000295598 IDI1Q13907 227 aa16.71■□□□□ 0.27
ATP1A1-201ENST00000295598 PLXNC1O60486 1568 aa16.71■□□□□ 0.27
ATP1A1-201ENST00000295598 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.26
ATP1A1-201ENST00000295598 ZMYM4Q5VZL5 1548 aa16.7■□□□□ 0.26
ATP1A1-201ENST00000295598 ERVK-7P63135 1459 aa16.7■□□□□ 0.26
ATP1A1-201ENST00000295598 MADDQ8WXG6 1647 aa16.7■□□□□ 0.26
ATP1A1-201ENST00000295598 ATP7AQ04656 1500 aa16.7■□□□□ 0.26
ATP1A1-201ENST00000295598 ARXQ96QS3 562 aa16.69■□□□□ 0.26
ATP1A1-201ENST00000295598 E9PSI1 815 aa16.69■□□□□ 0.26
ATP1A1-201ENST00000295598 CENPQQ7L2Z9 268 aaPredicted RBP16.69■□□□□ 0.26
ATP1A1-201ENST00000295598 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
ATP1A1-201ENST00000295598 SHROOM2Q13796 1616 aa16.68■□□□□ 0.26
ATP1A1-201ENST00000295598 POGKQ9P215 609 aa16.68■□□□□ 0.26
ATP1A1-201ENST00000295598 PTPRTO14522 1441 aa16.68■□□□□ 0.26
ATP1A1-201ENST00000295598 NUTM2FA1L443 756 aa16.67■□□□□ 0.26
ATP1A1-201ENST00000295598 C8orf34Q49A92 452 aa16.67■□□□□ 0.26
ATP1A1-201ENST00000295598 OSCARQ8IYS5 282 aa16.67■□□□□ 0.26
ATP1A1-201ENST00000295598 EIF2AK4Q9P2K8 1649 aaKnown RBP16.66■□□□□ 0.26
ATP1A1-201ENST00000295598 MS4A1P11836 297 aa16.66■□□□□ 0.26
ATP1A1-201ENST00000295598 IL27Q8NEV9 243 aa16.66■□□□□ 0.26
ATP1A1-201ENST00000295598 ELL2O00472 640 aaPredicted RBP16.66■□□□□ 0.26
ATP1A1-201ENST00000295598 TRPM2O94759 1503 aa16.66■□□□□ 0.26
ATP1A1-201ENST00000295598 C14orf93Q9H972 538 aaKnown RBP16.65■□□□□ 0.26
ATP1A1-201ENST00000295598 PRAM1Q96QH2 718 aa16.65■□□□□ 0.26
ATP1A1-201ENST00000295598 SLKQ9H2G2 1235 aaPredicted RBP16.65■□□□□ 0.26
ATP1A1-201ENST00000295598 PCDHB15Q9Y5E8 787 aa16.65■□□□□ 0.26
ATP1A1-201ENST00000295598 CD109Q6YHK3 1445 aa16.65■□□□□ 0.26
ATP1A1-201ENST00000295598 FAM161AQ3B820 660 aa16.65■□□□□ 0.26
ATP1A1-201ENST00000295598 WAPLQ7Z5K2 1190 aa16.64■□□□□ 0.25
ATP1A1-201ENST00000295598 NPATQ14207 1427 aa16.64■□□□□ 0.25
ATP1A1-201ENST00000295598 SOX12O15370 315 aa16.64■□□□□ 0.25
ATP1A1-201ENST00000295598 THUMPD2Q9BTF0 503 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms