RNA–Protein interactions for RNA: ENST00000285814.8

NIFK-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIFK, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-201ENST00000285814 A2ML1A8K2U0 1454 aa25.98■■□□□ 1.75
NIFK-201ENST00000285814 GPRASP1Q5JY77 1395 aa25.97■■□□□ 1.75
NIFK-201ENST00000285814 NLRP1Q9C000 1473 aa25.97■■□□□ 1.75
NIFK-201ENST00000285814 ROCK2O75116 1388 aaKnown RBP25.96■■□□□ 1.75
NIFK-201ENST00000285814 EIF4G2P78344 907 aaKnown RBP eCLIP25.95■■□□□ 1.74
NIFK-201ENST00000285814 ADGRF5Q8IZF2 1346 aa25.95■■□□□ 1.74
NIFK-201ENST00000285814 ZFYVE9O95405 1425 aa25.94■■□□□ 1.74
NIFK-201ENST00000285814 UBR1Q8IWV7 1749 aa25.93■■□□□ 1.74
NIFK-201ENST00000285814 PIK3C2GO75747 1445 aa25.92■■□□□ 1.74
NIFK-201ENST00000285814 HSPA5P11021 654 aaKnown RBP25.92■■□□□ 1.74
NIFK-201ENST00000285814 CARD11Q9BXL7 1154 aa25.91■■□□□ 1.74
NIFK-201ENST00000285814 STAG3Q9UJ98 1225 aa25.91■■□□□ 1.74
NIFK-201ENST00000285814 USP47Q96K76 1375 aa25.9■■□□□ 1.74
NIFK-201ENST00000285814 NBPF1Q3BBV0 1214 aa25.9■■□□□ 1.74
NIFK-201ENST00000285814 MYO3AQ8NEV4 1616 aa25.89■■□□□ 1.74
NIFK-201ENST00000285814 VGFO15240 615 aaPredicted RBP25.89■■□□□ 1.74
NIFK-201ENST00000285814 HIRIP3Q9BW71 556 aaPredicted RBP25.88■■□□□ 1.73
NIFK-201ENST00000285814 RIMS2Q9UQ26 1411 aa25.84■■□□□ 1.73
NIFK-201ENST00000285814 SETBP1Q9Y6X0 1596 aa25.84■■□□□ 1.73
NIFK-201ENST00000285814 IQGAP1P46940 1657 aa25.84■■□□□ 1.73
NIFK-201ENST00000285814 PLPPR3Q6T4P5 718 aa25.83■■□□□ 1.73
NIFK-201ENST00000285814 PTPRMP28827 1452 aa25.82■■□□□ 1.72
NIFK-201ENST00000285814 CFAP70Q5T0N1 1121 aa25.82■■□□□ 1.72
NIFK-201ENST00000285814 NUTM2DQ5VT03 806 aaPredicted RBP25.82■■□□□ 1.72
NIFK-201ENST00000285814 C14orf93Q9H972 538 aaKnown RBP25.8■■□□□ 1.72
NIFK-201ENST00000285814 TMEM2Q9UHN6 1383 aa25.8■■□□□ 1.72
NIFK-201ENST00000285814 ZNF142P52746 1687 aaPredicted RBP25.79■■□□□ 1.72
NIFK-201ENST00000285814 CEP170BQ9Y4F5 1589 aaPredicted RBP25.79■■□□□ 1.72
NIFK-201ENST00000285814 ADGRB1O14514 1584 aa25.78■■□□□ 1.72
NIFK-201ENST00000285814 SCAF11Q99590 1463 aaKnown RBP25.78■■□□□ 1.72
NIFK-201ENST00000285814 POLR1AO95602 1720 aaPredicted RBP25.77■■□□□ 1.72
NIFK-201ENST00000285814 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.77■■□□□ 1.72
NIFK-201ENST00000285814 SLIT1O75093 1534 aa25.76■■□□□ 1.71
NIFK-201ENST00000285814 SETD1BQ9UPS6 1966 aaKnown RBP25.76■■□□□ 1.71
NIFK-201ENST00000285814 ARHGAP23Q9P227 1491 aa25.75■■□□□ 1.71
NIFK-201ENST00000285814 ST20-MTHFSA0A0A6YYL1 179 aa25.73■■□□□ 1.71
NIFK-201ENST00000285814 HDGFP51858 240 aaKnown RBP25.73■■□□□ 1.71
NIFK-201ENST00000285814 DIEXFQ68CQ4 756 aaKnown RBP25.73■■□□□ 1.71
NIFK-201ENST00000285814 ALKQ9UM73 1620 aa25.72■■□□□ 1.71
NIFK-201ENST00000285814 NRXN3Q9Y4C0 1643 aa25.71■■□□□ 1.71
NIFK-201ENST00000285814 ASXL1Q8IXJ9 1541 aa25.71■■□□□ 1.71
NIFK-201ENST00000285814 SETD1AO15047 1707 aaKnown RBP25.7■■□□□ 1.71
NIFK-201ENST00000285814 THEMISQ8N1K5 641 aaPredicted RBP25.7■■□□□ 1.7
NIFK-201ENST00000285814 WASHC2AQ641Q2 1341 aa25.68■■□□□ 1.7
NIFK-201ENST00000285814 EIF3AQ14152 1382 aaKnown RBP25.68■■□□□ 1.7
NIFK-201ENST00000285814 C11orf95C9JLR9 678 aaPredicted RBP25.67■■□□□ 1.7
NIFK-201ENST00000285814 CCDC7Q96M83 1385 aa25.66■■□□□ 1.7
NIFK-201ENST00000285814 TMEM132EQ6IEE7 984 aa25.64■■□□□ 1.7
NIFK-201ENST00000285814 TESK2Q96S53 571 aa25.64■■□□□ 1.7
NIFK-201ENST00000285814 PLEKHG1Q9ULL1 1385 aa25.64■■□□□ 1.7
NIFK-201ENST00000285814 LTKP29376 864 aa25.63■■□□□ 1.69
NIFK-201ENST00000285814 KIF7Q2M1P5 1343 aa25.63■■□□□ 1.69
NIFK-201ENST00000285814 TXNDC2Q86VQ3 553 aa25.62■■□□□ 1.69
NIFK-201ENST00000285814 EID1Q9Y6B2 187 aa25.62■■□□□ 1.69
NIFK-201ENST00000285814 ARHGEF28Q8N1W1 1705 aaKnown RBP25.62■■□□□ 1.69
NIFK-201ENST00000285814 KDM4FA0A1W2PPD8 638 aa25.6■■□□□ 1.69
NIFK-201ENST00000285814 SENP3Q9H4L4 574 aaPredicted RBP25.6■■□□□ 1.69
NIFK-201ENST00000285814 DDX10Q13206 875 aaKnown RBP25.59■■□□□ 1.69
NIFK-201ENST00000285814 ADAMTS13Q76LX8 1427 aa25.58■■□□□ 1.69
NIFK-201ENST00000285814 YTHDC2Q9H6S0 1430 aaKnown RBP25.58■■□□□ 1.69
NIFK-201ENST00000285814 TRAK1Q9UPV9 953 aa25.57■■□□□ 1.68
NIFK-201ENST00000285814 SBNO2Q9Y2G9 1366 aa25.56■■□□□ 1.68
NIFK-201ENST00000285814 MED14O60244 1454 aa25.56■■□□□ 1.68
NIFK-201ENST00000285814 QRICH2Q9H0J4 1663 aa25.55■■□□□ 1.68
NIFK-201ENST00000285814 DIP2AQ14689 1571 aa25.54■■□□□ 1.68
NIFK-201ENST00000285814 DISP3Q9P2K9 1392 aa25.54■■□□□ 1.68
NIFK-201ENST00000285814 CENPJQ9HC77 1338 aaPredicted RBP25.53■■□□□ 1.68
NIFK-201ENST00000285814 METP08581 1390 aa25.53■■□□□ 1.68
NIFK-201ENST00000285814 LRPPRCP42704 1394 aaKnown RBP25.52■■□□□ 1.68
NIFK-201ENST00000285814 TMF1P82094 1093 aa25.52■■□□□ 1.68
NIFK-201ENST00000285814 DLC1Q96QB1 1528 aa25.52■■□□□ 1.68
NIFK-201ENST00000285814 KNDC1Q76NI1 1749 aa25.51■■□□□ 1.67
NIFK-201ENST00000285814 SLC24A1O60721 1099 aa25.51■■□□□ 1.67
NIFK-201ENST00000285814 BCANQ96GW7 911 aa25.5■■□□□ 1.67
NIFK-201ENST00000285814 ABCC11Q96J66 1382 aa25.49■■□□□ 1.67
NIFK-201ENST00000285814 ANKLE2Q86XL3 938 aa25.49■■□□□ 1.67
NIFK-201ENST00000285814 STK26Q9P289 416 aa25.49■■□□□ 1.67
NIFK-201ENST00000285814 TECPR2O15040 1411 aa25.47■■□□□ 1.67
NIFK-201ENST00000285814 TBX22Q9Y458 520 aa25.46■■□□□ 1.67
NIFK-201ENST00000285814 CPS1P31327 1500 aa25.45■■□□□ 1.67
NIFK-201ENST00000285814 CDCA8Q53HL2 280 aa25.43■■□□□ 1.66
NIFK-201ENST00000285814 POLR3GLQ9BT43 218 aa25.43■■□□□ 1.66
NIFK-201ENST00000285814 SLC26A8Q96RN1 970 aa25.43■■□□□ 1.66
NIFK-201ENST00000285814 PRAM1Q96QH2 718 aa25.41■■□□□ 1.66
NIFK-201ENST00000285814 FAM135BQ49AJ0 1406 aa25.4■■□□□ 1.66
NIFK-201ENST00000285814 SIRT1Q96EB6 747 aa25.39■■□□□ 1.65
NIFK-201ENST00000285814 PTPRUQ92729 1446 aa25.39■■□□□ 1.65
NIFK-201ENST00000285814 TULP4Q9NRJ4 1543 aa25.39■■□□□ 1.65
NIFK-201ENST00000285814 NPHP4O75161 1426 aaPredicted RBP25.38■■□□□ 1.65
NIFK-201ENST00000285814 PIK3R4Q99570 1358 aa25.38■■□□□ 1.65
NIFK-201ENST00000285814 POGKQ9P215 609 aa25.37■■□□□ 1.65
NIFK-201ENST00000285814 MYOM1P52179 1685 aa25.37■■□□□ 1.65
NIFK-201ENST00000285814 XRN1Q8IZH2 1706 aaKnown RBP25.37■■□□□ 1.65
NIFK-201ENST00000285814 MIER1Q8N108 512 aa25.37■■□□□ 1.65
NIFK-201ENST00000285814 LMTK3Q96Q04 1460 aa25.36■■□□□ 1.65
NIFK-201ENST00000285814 PLEKHH1Q9ULM0 1364 aa25.35■■□□□ 1.65
NIFK-201ENST00000285814 SAFB2Q14151 953 aaKnown RBP eCLIP25.34■■□□□ 1.65
NIFK-201ENST00000285814 EVC2Q86UK5 1308 aa25.33■■□□□ 1.65
NIFK-201ENST00000285814 ROBO2Q9HCK4 1378 aa25.33■■□□□ 1.65
NIFK-201ENST00000285814 PTCH1Q13635 1447 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms