RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 RPGRIP1LQ68CZ1 1315 aa27.24■■□□□ 1.95
C11orf49-201ENST00000278460 ARID4BQ4LE39 1312 aaPredicted RBP27.23■■□□□ 1.95
C11orf49-201ENST00000278460 CHGAP10645 457 aaKnown RBP27.22■■□□□ 1.95
C11orf49-201ENST00000278460 MLECQ14165 292 aa27.21■■□□□ 1.95
C11orf49-201ENST00000278460 KIF7Q2M1P5 1343 aa27.21■■□□□ 1.95
C11orf49-201ENST00000278460 NEXMIFQ5QGS0 1516 aa27.2■■□□□ 1.95
C11orf49-201ENST00000278460 ST20-MTHFSA0A0A6YYL1 179 aa27.19■■□□□ 1.94
C11orf49-201ENST00000278460 IDI1Q13907 227 aa27.19■■□□□ 1.94
C11orf49-201ENST00000278460 ADGRF5Q8IZF2 1346 aa27.17■■□□□ 1.94
C11orf49-201ENST00000278460 FBXO31Q5XUX0 539 aaPredicted RBP27.16■■□□□ 1.94
C11orf49-201ENST00000278460 SETBP1Q9Y6X0 1596 aa27.15■■□□□ 1.94
C11orf49-201ENST00000278460 ESF1Q9H501 851 aaKnown RBP27.15■■□□□ 1.94
C11orf49-201ENST00000278460 SCAF11Q99590 1463 aaKnown RBP27.14■■□□□ 1.93
C11orf49-201ENST00000278460 PIK3C2GO75747 1445 aa27.13■■□□□ 1.93
C11orf49-201ENST00000278460 ZMYM3Q14202 1370 aa27.12■■□□□ 1.93
C11orf49-201ENST00000278460 ZFYVE9O95405 1425 aa27.11■■□□□ 1.93
C11orf49-201ENST00000278460 FER1L4A9Z1Z3 1794 aa27.11■■□□□ 1.93
C11orf49-201ENST00000278460 ANP32CO43423 234 aa27.08■■□□□ 1.93
C11orf49-201ENST00000278460 CFAP70Q5T0N1 1121 aa27.07■■□□□ 1.92
C11orf49-201ENST00000278460 VGFO15240 615 aaPredicted RBP27.06■■□□□ 1.92
C11orf49-201ENST00000278460 KDM5AP29375 1690 aaKnown RBP27.06■■□□□ 1.92
C11orf49-201ENST00000278460 MYO3AQ8NEV4 1616 aa27.05■■□□□ 1.92
C11orf49-201ENST00000278460 TESK2Q96S53 571 aa27.05■■□□□ 1.92
C11orf49-201ENST00000278460 EIF3AQ14152 1382 aaKnown RBP27.04■■□□□ 1.92
C11orf49-201ENST00000278460 C3P01024 1663 aa27.03■■□□□ 1.92
C11orf49-201ENST00000278460 C14orf93Q9H972 538 aaKnown RBP27.03■■□□□ 1.92
C11orf49-201ENST00000278460 A2ML1A8K2U0 1454 aa27.02■■□□□ 1.92
C11orf49-201ENST00000278460 ADGRB1O14514 1584 aa27.02■■□□□ 1.92
C11orf49-201ENST00000278460 TNRQ92752 1358 aa26.98■■□□□ 1.91
C11orf49-201ENST00000278460 CCER2I3L3R5 266 aa26.98■■□□□ 1.91
C11orf49-201ENST00000278460 TMF1P82094 1093 aa26.97■■□□□ 1.91
C11orf49-201ENST00000278460 STAG3Q9UJ98 1225 aa26.97■■□□□ 1.91
C11orf49-201ENST00000278460 DISP3Q9P2K9 1392 aa26.96■■□□□ 1.91
C11orf49-201ENST00000278460 UBR1Q8IWV7 1749 aa26.96■■□□□ 1.91
C11orf49-201ENST00000278460 POLR3GLQ9BT43 218 aa26.96■■□□□ 1.91
C11orf49-201ENST00000278460 ARHGEF28Q8N1W1 1705 aaKnown RBP26.93■■□□□ 1.9
C11orf49-201ENST00000278460 QRICH2Q9H0J4 1663 aa26.92■■□□□ 1.9
C11orf49-201ENST00000278460 SLC24A1O60721 1099 aa26.91■■□□□ 1.9
C11orf49-201ENST00000278460 NUTM2DQ5VT03 806 aaPredicted RBP26.91■■□□□ 1.9
C11orf49-201ENST00000278460 RIMS2Q9UQ26 1411 aa26.91■■□□□ 1.9
C11orf49-201ENST00000278460 NLRP1Q9C000 1473 aa26.9■■□□□ 1.9
C11orf49-201ENST00000278460 SBNO2Q9Y2G9 1366 aa26.89■■□□□ 1.9
C11orf49-201ENST00000278460 ASXL1Q8IXJ9 1541 aa26.88■■□□□ 1.89
C11orf49-201ENST00000278460 SETD1AO15047 1707 aaKnown RBP26.87■■□□□ 1.89
C11orf49-201ENST00000278460 ALKQ9UM73 1620 aa26.87■■□□□ 1.89
C11orf49-201ENST00000278460 CDCA8Q53HL2 280 aa26.86■■□□□ 1.89
C11orf49-201ENST00000278460 YTHDC1Q96MU7 727 aaKnown RBP26.85■■□□□ 1.89
C11orf49-201ENST00000278460 PRKRIP1Q9H875 184 aaPredicted RBP26.85■■□□□ 1.89
C11orf49-201ENST00000278460 RIMS1Q86UR5 1692 aaKnown RBP26.85■■□□□ 1.89
C11orf49-201ENST00000278460 MYOM1P52179 1685 aa26.84■■□□□ 1.89
C11orf49-201ENST00000278460 ADAMTSL3P82987 1691 aa26.83■■□□□ 1.89
C11orf49-201ENST00000278460 CENPBP07199 599 aaPredicted RBP26.83■■□□□ 1.89
C11orf49-201ENST00000278460 TMEM132EQ6IEE7 984 aa26.83■■□□□ 1.89
C11orf49-201ENST00000278460 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.83■■□□□ 1.88
C11orf49-201ENST00000278460 CENPJQ9HC77 1338 aaPredicted RBP26.82■■□□□ 1.88
C11orf49-201ENST00000278460 NRXN3Q9Y4C0 1643 aa26.82■■□□□ 1.88
C11orf49-201ENST00000278460 TRAK1Q9UPV9 953 aa26.8■■□□□ 1.88
C11orf49-201ENST00000278460 CEBPAP49715 358 aaPredicted RBP26.79■■□□□ 1.88
C11orf49-201ENST00000278460 HDGFP51858 240 aaKnown RBP26.78■■□□□ 1.88
C11orf49-201ENST00000278460 TMEM2Q9UHN6 1383 aa26.77■■□□□ 1.88
C11orf49-201ENST00000278460 PTPRMP28827 1452 aa26.75■■□□□ 1.87
C11orf49-201ENST00000278460 YTHDC2Q9H6S0 1430 aaKnown RBP26.75■■□□□ 1.87
C11orf49-201ENST00000278460 KTN1Q86UP2 1357 aaKnown RBP26.73■■□□□ 1.87
C11orf49-201ENST00000278460 SLIT1O75093 1534 aa26.71■■□□□ 1.87
C11orf49-201ENST00000278460 KNDC1Q76NI1 1749 aa26.71■■□□□ 1.87
C11orf49-201ENST00000278460 DLC1Q96QB1 1528 aa26.71■■□□□ 1.87
C11orf49-201ENST00000278460 SETD1BQ9UPS6 1966 aaKnown RBP26.7■■□□□ 1.87
C11orf49-201ENST00000278460 PER1O15534 1290 aaPredicted RBP26.7■■□□□ 1.86
C11orf49-201ENST00000278460 ARHGAP23Q9P227 1491 aa26.69■■□□□ 1.86
C11orf49-201ENST00000278460 PANK3Q9H999 370 aa26.68■■□□□ 1.86
C11orf49-201ENST00000278460 ZNF142P52746 1687 aaPredicted RBP26.66■■□□□ 1.86
C11orf49-201ENST00000278460 TULP4Q9NRJ4 1543 aa26.66■■□□□ 1.86
C11orf49-201ENST00000278460 LRPPRCP42704 1394 aaKnown RBP26.66■■□□□ 1.86
C11orf49-201ENST00000278460 CEP170BQ9Y4F5 1589 aaPredicted RBP26.65■■□□□ 1.86
C11orf49-201ENST00000278460 SENP3Q9H4L4 574 aaPredicted RBP26.65■■□□□ 1.86
C11orf49-201ENST00000278460 RALBP1Q15311 655 aa26.64■■□□□ 1.85
C11orf49-201ENST00000278460 PUS7Q96PZ0 661 aaKnown RBP26.64■■□□□ 1.85
C11orf49-201ENST00000278460 STK26Q9P289 416 aa26.64■■□□□ 1.85
C11orf49-201ENST00000278460 PLEKHG1Q9ULL1 1385 aa26.64■■□□□ 1.85
C11orf49-201ENST00000278460 PLPPR3Q6T4P5 718 aa26.61■■□□□ 1.85
C11orf49-201ENST00000278460 PARD3Q8TEW0 1356 aa26.61■■□□□ 1.85
C11orf49-201ENST00000278460 ABCC11Q96J66 1382 aa26.61■■□□□ 1.85
C11orf49-201ENST00000278460 EVC2Q86UK5 1308 aa26.61■■□□□ 1.85
C11orf49-201ENST00000278460 THEMISQ8N1K5 641 aaPredicted RBP26.6■■□□□ 1.85
C11orf49-201ENST00000278460 CCDC184Q52MB2 194 aa26.59■■□□□ 1.85
C11orf49-201ENST00000278460 ADAMTS13Q76LX8 1427 aa26.59■■□□□ 1.85
C11orf49-201ENST00000278460 LTKP29376 864 aa26.57■■□□□ 1.84
C11orf49-201ENST00000278460 MRS2Q9HD23 443 aa26.57■■□□□ 1.84
C11orf49-201ENST00000278460 EID1Q9Y6B2 187 aa26.57■■□□□ 1.84
C11orf49-201ENST00000278460 METP08581 1390 aa26.57■■□□□ 1.84
C11orf49-201ENST00000278460 CPS1P31327 1500 aa26.57■■□□□ 1.84
C11orf49-201ENST00000278460 PRAM1Q96QH2 718 aa26.57■■□□□ 1.84
C11orf49-201ENST00000278460 TECPR2O15040 1411 aa26.56■■□□□ 1.84
C11orf49-201ENST00000278460 MYBBP1AQ9BQG0 1328 aaKnown RBP26.56■■□□□ 1.84
C11orf49-201ENST00000278460 MED14O60244 1454 aa26.56■■□□□ 1.84
C11orf49-201ENST00000278460 TXNDC2Q86VQ3 553 aa26.56■■□□□ 1.84
C11orf49-201ENST00000278460 POGKQ9P215 609 aa26.56■■□□□ 1.84
C11orf49-201ENST00000278460 CNGB1Q14028 1251 aaPredicted RBP26.54■■□□□ 1.84
C11orf49-201ENST00000278460 DIP2AQ14689 1571 aa26.54■■□□□ 1.84
C11orf49-201ENST00000278460 KNSTRNQ9Y448 316 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms