RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 POGKQ9P215 609 aa24.19■■□□□ 1.46
SSC4D-201ENST00000275560 USP19O94966 1318 aa24.19■■□□□ 1.46
SSC4D-201ENST00000275560 SLKQ9H2G2 1235 aaPredicted RBP24.18■■□□□ 1.46
SSC4D-201ENST00000275560 ARHGEF5Q12774 1597 aa24.16■■□□□ 1.46
SSC4D-201ENST00000275560 LAMC1P11047 1609 aa24.13■■□□□ 1.45
SSC4D-201ENST00000275560 PANK1Q8TE04 598 aa24.13■■□□□ 1.45
SSC4D-201ENST00000275560 CDC42BPBQ9Y5S2 1711 aa24.13■■□□□ 1.45
SSC4D-201ENST00000275560 ARXQ96QS3 562 aa24.13■■□□□ 1.45
SSC4D-201ENST00000275560 SYCP2Q9BX26 1530 aa24.13■■□□□ 1.45
SSC4D-201ENST00000275560 COG6Q9Y2V7 657 aa24.12■■□□□ 1.45
SSC4D-201ENST00000275560 TRMT2AQ8IZ69 625 aaKnown RBP24.11■■□□□ 1.45
SSC4D-201ENST00000275560 SYNJ2O15056 1496 aa24.11■■□□□ 1.45
SSC4D-201ENST00000275560 NKTRP30414 1462 aaKnown RBP24.09■■□□□ 1.45
SSC4D-201ENST00000275560 EIF3AQ14152 1382 aaKnown RBP24.09■■□□□ 1.45
SSC4D-201ENST00000275560 EIF2AK4Q9P2K8 1649 aaKnown RBP24.08■■□□□ 1.45
SSC4D-201ENST00000275560 CANXP27824 592 aaKnown RBP24.06■■□□□ 1.44
SSC4D-201ENST00000275560 UNC13BO14795 1591 aa24.06■■□□□ 1.44
SSC4D-201ENST00000275560 NEUROD2Q15784 382 aa24.04■■□□□ 1.44
SSC4D-201ENST00000275560 TNNQ9UQP3 1299 aa24.04■■□□□ 1.44
SSC4D-201ENST00000275560 SPRYD3Q8NCJ5 442 aa24.04■■□□□ 1.44
SSC4D-201ENST00000275560 ASXL1Q8IXJ9 1541 aa24.03■■□□□ 1.44
SSC4D-201ENST00000275560 FAM43AQ8N2R8 423 aa24.02■■□□□ 1.44
SSC4D-201ENST00000275560 CLUAP1Q96AJ1 413 aa24.02■■□□□ 1.44
SSC4D-201ENST00000275560 RNF17Q9BXT8 1623 aaKnown RBP24.02■■□□□ 1.44
SSC4D-201ENST00000275560 NUP160Q12769 1436 aa24.02■■□□□ 1.44
SSC4D-201ENST00000275560 PREX2Q70Z35 1606 aa24.02■■□□□ 1.44
SSC4D-201ENST00000275560 E9PSI1 815 aa24.02■■□□□ 1.43
SSC4D-201ENST00000275560 ARHGAP5Q13017 1502 aa24.01■■□□□ 1.43
SSC4D-201ENST00000275560 RRP7AQ9Y3A4 280 aaKnown RBP24.01■■□□□ 1.43
SSC4D-201ENST00000275560 PIK3C2GO75747 1445 aa24■■□□□ 1.43
SSC4D-201ENST00000275560 CLASP1Q7Z460 1538 aa24■■□□□ 1.43
SSC4D-201ENST00000275560 IQGAP3Q86VI3 1631 aa24■■□□□ 1.43
SSC4D-201ENST00000275560 RSPH4AQ5TD94 716 aa24■■□□□ 1.43
SSC4D-201ENST00000275560 VIRMAQ69YN4 1812 aaKnown RBP24■■□□□ 1.43
SSC4D-201ENST00000275560 BCL2L13Q9BXK5 485 aa23.99■■□□□ 1.43
SSC4D-201ENST00000275560 CENPJQ9HC77 1338 aaPredicted RBP23.99■■□□□ 1.43
SSC4D-201ENST00000275560 RRAGDQ9NQL2 400 aaPredicted RBP23.99■■□□□ 1.43
SSC4D-201ENST00000275560 NLRP1Q9C000 1473 aa23.97■■□□□ 1.43
SSC4D-201ENST00000275560 CGNL1Q0VF96 1302 aa23.96■■□□□ 1.43
SSC4D-201ENST00000275560 TTC37Q6PGP7 1564 aa23.96■■□□□ 1.43
SSC4D-201ENST00000275560 TNNT2P45379 298 aaPredicted RBP23.96■■□□□ 1.43
SSC4D-201ENST00000275560 BECN1Q14457 450 aa23.96■■□□□ 1.43
SSC4D-201ENST00000275560 SYNMO15061 1565 aa23.96■■□□□ 1.43
SSC4D-201ENST00000275560 UBE2Q2Q8WVN8 375 aa23.96■■□□□ 1.43
SSC4D-201ENST00000275560 IQGAP1P46940 1657 aa23.96■■□□□ 1.43
SSC4D-201ENST00000275560 CARD14Q9BXL6 1004 aa23.95■■□□□ 1.42
SSC4D-201ENST00000275560 PCDHB15Q9Y5E8 787 aa23.95■■□□□ 1.42
SSC4D-201ENST00000275560 MADDQ8WXG6 1647 aa23.95■■□□□ 1.42
SSC4D-201ENST00000275560 RLBP1P12271 317 aa23.95■■□□□ 1.42
SSC4D-201ENST00000275560 MYOM1P52179 1685 aa23.95■■□□□ 1.42
SSC4D-201ENST00000275560 CDCA8Q53HL2 280 aa23.94■■□□□ 1.42
SSC4D-201ENST00000275560 WWC1Q8IX03 1113 aa23.94■■□□□ 1.42
SSC4D-201ENST00000275560 ANTXR1Q9H6X2 564 aa23.94■■□□□ 1.42
SSC4D-201ENST00000275560 MAPK8IP3Q9UPT6 1336 aa23.93■■□□□ 1.42
SSC4D-201ENST00000275560 PDE3AQ14432 1141 aa23.93■■□□□ 1.42
SSC4D-201ENST00000275560 GZF1Q9H116 711 aaPredicted RBP23.93■■□□□ 1.42
SSC4D-201ENST00000275560 ABCC2Q92887 1545 aa23.93■■□□□ 1.42
SSC4D-201ENST00000275560 TBC1D2Q9BYX2 928 aa23.92■■□□□ 1.42
SSC4D-201ENST00000275560 SCAF11Q99590 1463 aaKnown RBP23.92■■□□□ 1.42
SSC4D-201ENST00000275560 ATP10AO60312 1499 aa23.9■■□□□ 1.42
SSC4D-201ENST00000275560 RSPH6AQ9H0K4 717 aa23.9■■□□□ 1.42
SSC4D-201ENST00000275560 MAST1Q9Y2H9 1570 aa23.9■■□□□ 1.42
SSC4D-201ENST00000275560 PDZRN3Q9UPQ7 1066 aa23.89■■□□□ 1.42
SSC4D-201ENST00000275560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.87■■□□□ 1.41
SSC4D-201ENST00000275560 CFAP70Q5T0N1 1121 aa23.87■■□□□ 1.41
SSC4D-201ENST00000275560 TBC1D32Q96NH3 1257 aa23.87■■□□□ 1.41
SSC4D-201ENST00000275560 RARSP54136 660 aaKnown RBP23.86■■□□□ 1.41
SSC4D-201ENST00000275560 PANK2Q9BZ23 570 aa23.86■■□□□ 1.41
SSC4D-201ENST00000275560 ERCC6Q03468 1493 aa23.86■■□□□ 1.41
SSC4D-201ENST00000275560 DUOX2Q9NRD8 1548 aa23.85■■□□□ 1.41
SSC4D-201ENST00000275560 PLXNC1O60486 1568 aa23.84■■□□□ 1.41
SSC4D-201ENST00000275560 UPF2Q9HAU5 1272 aaKnown RBP23.84■■□□□ 1.41
SSC4D-201ENST00000275560 XRCC6P12956 609 aaKnown RBP eCLIP23.83■■□□□ 1.41
SSC4D-201ENST00000275560 NPC1L1Q9UHC9 1359 aa23.83■■□□□ 1.41
SSC4D-201ENST00000275560 KDM5AP29375 1690 aaKnown RBP23.8■■□□□ 1.4
SSC4D-201ENST00000275560 L1TD1Q5T7N2 865 aaKnown RBP23.8■■□□□ 1.4
SSC4D-201ENST00000275560 TCP11L2Q8N4U5 519 aa23.8■■□□□ 1.4
SSC4D-201ENST00000275560 PMFBP1Q8TBY8 1022 aa23.8■■□□□ 1.4
SSC4D-201ENST00000275560 SPHKAPQ2M3C7 1700 aa23.8■■□□□ 1.4
SSC4D-201ENST00000275560 CEP152O94986 1710 aa23.79■■□□□ 1.4
SSC4D-201ENST00000275560 ERVK-7P63135 1459 aa23.79■■□□□ 1.4
SSC4D-201ENST00000275560 CLTCL1P53675 1640 aa23.78■■□□□ 1.4
SSC4D-201ENST00000275560 MFAP1P55081 439 aaKnown RBP23.78■■□□□ 1.4
SSC4D-201ENST00000275560 SCAPERQ9BY12 1400 aa23.77■■□□□ 1.4
SSC4D-201ENST00000275560 TRAPPC8Q9Y2L5 1435 aa23.77■■□□□ 1.4
SSC4D-201ENST00000275560 ADGRF5Q8IZF2 1346 aa23.76■■□□□ 1.39
SSC4D-201ENST00000275560 MCM4P33991 863 aa23.76■■□□□ 1.39
SSC4D-201ENST00000275560 AFAP1Q8N556 730 aa23.76■■□□□ 1.39
SSC4D-201ENST00000275560 GOLGA6L3A6NEY3 463 aa23.76■■□□□ 1.39
SSC4D-201ENST00000275560 NINLQ9Y2I6 1382 aa23.75■■□□□ 1.39
SSC4D-201ENST00000275560 MORC1Q86VD1 984 aa23.74■■□□□ 1.39
SSC4D-201ENST00000275560 RUNDC1Q96C34 613 aa23.73■■□□□ 1.39
SSC4D-201ENST00000275560 RWDD1Q9H446 243 aaPredicted RBP23.72■■□□□ 1.39
SSC4D-201ENST00000275560 TRPM2O94759 1503 aa23.72■■□□□ 1.39
SSC4D-201ENST00000275560 SLC12A5Q9H2X9 1139 aa23.72■■□□□ 1.39
SSC4D-201ENST00000275560 POLR3AO14802 1390 aaPredicted RBP23.72■■□□□ 1.39
SSC4D-201ENST00000275560 UGGT1Q9NYU2 1555 aa23.71■■□□□ 1.39
SSC4D-201ENST00000275560 C22orf23Q9BZE7 217 aa23.71■■□□□ 1.39
SSC4D-201ENST00000275560 NSD3Q9BZ95 1437 aa23.7■■□□□ 1.38
SSC4D-201ENST00000275560 FSD2A1L4K1 749 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms