RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
SDE2-201ENST00000272091 FBXO31Q5XUX0 539 aaPredicted RBP16.93■□□□□ 0.3
SDE2-201ENST00000272091 DNAJC5Q9H3Z4 198 aa16.92■□□□□ 0.3
SDE2-201ENST00000272091 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
SDE2-201ENST00000272091 IDI1Q13907 227 aa16.92■□□□□ 0.3
SDE2-201ENST00000272091 ARID4BQ4LE39 1312 aaPredicted RBP16.91■□□□□ 0.3
SDE2-201ENST00000272091 TESK2Q96S53 571 aa16.91■□□□□ 0.3
SDE2-201ENST00000272091 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
SDE2-201ENST00000272091 MLECQ14165 292 aa16.9■□□□□ 0.3
SDE2-201ENST00000272091 YTHDC1Q96MU7 727 aaKnown RBP16.9■□□□□ 0.3
SDE2-201ENST00000272091 SCAF1Q9H7N4 1312 aaKnown RBP16.9■□□□□ 0.3
SDE2-201ENST00000272091 SCAF11Q99590 1463 aaKnown RBP16.9■□□□□ 0.3
SDE2-201ENST00000272091 SETBP1Q9Y6X0 1596 aa16.9■□□□□ 0.3
SDE2-201ENST00000272091 CFAP70Q5T0N1 1121 aa16.89■□□□□ 0.29
SDE2-201ENST00000272091 DISP3Q9P2K9 1392 aa16.88■□□□□ 0.29
SDE2-201ENST00000272091 ANP32CO43423 234 aa16.88■□□□□ 0.29
SDE2-201ENST00000272091 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
SDE2-201ENST00000272091 ADGRB1O14514 1584 aa16.88■□□□□ 0.29
SDE2-201ENST00000272091 RPGRIP1LQ68CZ1 1315 aa16.88■□□□□ 0.29
SDE2-201ENST00000272091 SLC52A1Q9NWF4 448 aa16.87■□□□□ 0.29
SDE2-201ENST00000272091 MYO3AQ8NEV4 1616 aa16.87■□□□□ 0.29
SDE2-201ENST00000272091 CCER2I3L3R5 266 aa16.84■□□□□ 0.29
SDE2-201ENST00000272091 ZMYM3Q14202 1370 aa16.84■□□□□ 0.29
SDE2-201ENST00000272091 ZFYVE9O95405 1425 aa16.83■□□□□ 0.29
SDE2-201ENST00000272091 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
SDE2-201ENST00000272091 C14orf93Q9H972 538 aaKnown RBP16.82■□□□□ 0.28
SDE2-201ENST00000272091 ASXL1Q8IXJ9 1541 aa16.82■□□□□ 0.28
SDE2-201ENST00000272091 A2ML1A8K2U0 1454 aa16.82■□□□□ 0.28
SDE2-201ENST00000272091 NUTM2DQ5VT03 806 aaPredicted RBP16.82■□□□□ 0.28
SDE2-201ENST00000272091 MYOM1P52179 1685 aa16.81■□□□□ 0.28
SDE2-201ENST00000272091 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
SDE2-201ENST00000272091 FER1L4A9Z1Z3 1794 aa16.79■□□□□ 0.28
SDE2-201ENST00000272091 ARHGEF28Q8N1W1 1705 aaKnown RBP16.79■□□□□ 0.28
SDE2-201ENST00000272091 C3P01024 1663 aa16.79■□□□□ 0.28
SDE2-201ENST00000272091 QRICH2Q9H0J4 1663 aa16.78■□□□□ 0.28
SDE2-201ENST00000272091 SETD1AO15047 1707 aaKnown RBP16.78■□□□□ 0.28
SDE2-201ENST00000272091 EIF3AQ14152 1382 aaKnown RBP16.77■□□□□ 0.27
SDE2-201ENST00000272091 UBR1Q8IWV7 1749 aa16.77■□□□□ 0.27
SDE2-201ENST00000272091 VGFO15240 615 aaPredicted RBP16.77■□□□□ 0.27
SDE2-201ENST00000272091 KDM5AP29375 1690 aaKnown RBP16.76■□□□□ 0.27
SDE2-201ENST00000272091 CENPBP07199 599 aaPredicted RBP16.75■□□□□ 0.27
SDE2-201ENST00000272091 TMF1P82094 1093 aa16.75■□□□□ 0.27
SDE2-201ENST00000272091 CCDC184Q52MB2 194 aa16.75■□□□□ 0.27
SDE2-201ENST00000272091 TMEM132EQ6IEE7 984 aa16.75■□□□□ 0.27
SDE2-201ENST00000272091 NRXN3Q9Y4C0 1643 aa16.74■□□□□ 0.27
SDE2-201ENST00000272091 ALKQ9UM73 1620 aa16.74■□□□□ 0.27
SDE2-201ENST00000272091 TNRQ92752 1358 aa16.73■□□□□ 0.27
SDE2-201ENST00000272091 ESF1Q9H501 851 aaKnown RBP16.72■□□□□ 0.27
SDE2-201ENST00000272091 RIMS2Q9UQ26 1411 aa16.72■□□□□ 0.27
SDE2-201ENST00000272091 PTPRMP28827 1452 aa16.72■□□□□ 0.27
SDE2-201ENST00000272091 SBNO2Q9Y2G9 1366 aa16.72■□□□□ 0.27
SDE2-201ENST00000272091 PER1O15534 1290 aaPredicted RBP16.71■□□□□ 0.27
SDE2-201ENST00000272091 TRAK1Q9UPV9 953 aa16.7■□□□□ 0.26
SDE2-201ENST00000272091 SENP3Q9H4L4 574 aaPredicted RBP16.69■□□□□ 0.26
SDE2-201ENST00000272091 CEBPAP49715 358 aaPredicted RBP16.68■□□□□ 0.26
SDE2-201ENST00000272091 CENPJQ9HC77 1338 aaPredicted RBP16.68■□□□□ 0.26
SDE2-201ENST00000272091 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
SDE2-201ENST00000272091 TULP4Q9NRJ4 1543 aa16.67■□□□□ 0.26
SDE2-201ENST00000272091 PANK3Q9H999 370 aa16.66■□□□□ 0.26
SDE2-201ENST00000272091 RIMS1Q86UR5 1692 aaKnown RBP16.65■□□□□ 0.26
SDE2-201ENST00000272091 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
SDE2-201ENST00000272091 YTHDC2Q9H6S0 1430 aaKnown RBP16.65■□□□□ 0.26
SDE2-201ENST00000272091 ADAMTSL3P82987 1691 aa16.64■□□□□ 0.26
SDE2-201ENST00000272091 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.25
SDE2-201ENST00000272091 CNGB1Q14028 1251 aaPredicted RBP16.64■□□□□ 0.25
SDE2-201ENST00000272091 TMEM2Q9UHN6 1383 aa16.62■□□□□ 0.25
SDE2-201ENST00000272091 CDCA8Q53HL2 280 aa16.62■□□□□ 0.25
SDE2-201ENST00000272091 KTN1Q86UP2 1357 aaKnown RBP16.61■□□□□ 0.25
SDE2-201ENST00000272091 MRS2Q9HD23 443 aa16.6■□□□□ 0.25
SDE2-201ENST00000272091 DLC1Q96QB1 1528 aa16.6■□□□□ 0.25
SDE2-201ENST00000272091 KNDC1Q76NI1 1749 aa16.59■□□□□ 0.25
SDE2-201ENST00000272091 STK26Q9P289 416 aa16.59■□□□□ 0.25
SDE2-201ENST00000272091 SLIT1O75093 1534 aa16.59■□□□□ 0.25
SDE2-201ENST00000272091 ARHGAP23Q9P227 1491 aa16.59■□□□□ 0.25
SDE2-201ENST00000272091 SLC24A1O60721 1099 aa16.58■□□□□ 0.24
SDE2-201ENST00000272091 RALBP1Q15311 655 aa16.58■□□□□ 0.24
SDE2-201ENST00000272091 METP08581 1390 aa16.58■□□□□ 0.24
SDE2-201ENST00000272091 MYBBP1AQ9BQG0 1328 aaKnown RBP16.57■□□□□ 0.24
SDE2-201ENST00000272091 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.57■□□□□ 0.24
SDE2-201ENST00000272091 ADAMTS13Q76LX8 1427 aa16.56■□□□□ 0.24
SDE2-201ENST00000272091 LRPPRCP42704 1394 aaKnown RBP16.56■□□□□ 0.24
SDE2-201ENST00000272091 AMER1Q5JTC6 1135 aaPredicted RBP16.56■□□□□ 0.24
SDE2-201ENST00000272091 LTKP29376 864 aa16.55■□□□□ 0.24
SDE2-201ENST00000272091 CC2D1BQ5T0F9 858 aaKnown RBP16.55■□□□□ 0.24
SDE2-201ENST00000272091 PLPPR3Q6T4P5 718 aa16.54■□□□□ 0.24
SDE2-201ENST00000272091 CARD14Q9BXL6 1004 aa16.54■□□□□ 0.24
SDE2-201ENST00000272091 PRAM1Q96QH2 718 aa16.54■□□□□ 0.24
SDE2-201ENST00000272091 CEP170BQ9Y4F5 1589 aaPredicted RBP16.54■□□□□ 0.24
SDE2-201ENST00000272091 MED14O60244 1454 aa16.54■□□□□ 0.24
SDE2-201ENST00000272091 SAFB2Q14151 953 aaKnown RBP eCLIP16.54■□□□□ 0.24
SDE2-201ENST00000272091 ZNF142P52746 1687 aaPredicted RBP16.54■□□□□ 0.24
SDE2-201ENST00000272091 BRD4O60885 1362 aaPredicted RBP16.53■□□□□ 0.24
SDE2-201ENST00000272091 PLEKHH1Q9ULM0 1364 aa16.53■□□□□ 0.24
SDE2-201ENST00000272091 CPS1P31327 1500 aa16.53■□□□□ 0.24
SDE2-201ENST00000272091 PLEKHG1Q9ULL1 1385 aa16.53■□□□□ 0.24
SDE2-201ENST00000272091 FAM9BQ8IZU0 186 aa16.53■□□□□ 0.24
SDE2-201ENST00000272091 ABCC11Q96J66 1382 aa16.53■□□□□ 0.24
SDE2-201ENST00000272091 USP32Q8NFA0 1604 aa16.52■□□□□ 0.24
SDE2-201ENST00000272091 NPC1L1Q9UHC9 1359 aa16.52■□□□□ 0.23
SDE2-201ENST00000272091 TECPR2O15040 1411 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms