RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 WASHC2AQ641Q2 1341 aa34.28■■■■□ 3.08
R3HCC1-201ENST00000265806 TMEM131LA2VDJ0 1609 aa34.27■■■■□ 3.08
R3HCC1-201ENST00000265806 ADGRF5Q8IZF2 1346 aa34.26■■■■□ 3.08
R3HCC1-201ENST00000265806 POLR1AO95602 1720 aaPredicted RBP34.25■■■■□ 3.07
R3HCC1-201ENST00000265806 NEXMIFQ5QGS0 1516 aa34.23■■■■□ 3.07
R3HCC1-201ENST00000265806 CCDC7Q96M83 1385 aa34.22■■■■□ 3.07
R3HCC1-201ENST00000265806 C11orf95C9JLR9 678 aaPredicted RBP34.22■■■■□ 3.07
R3HCC1-201ENST00000265806 MIER1Q8N108 512 aa34.22■■■■□ 3.07
R3HCC1-201ENST00000265806 ST20-MTHFSA0A0A6YYL1 179 aa34.19■■■■□ 3.06
R3HCC1-201ENST00000265806 MYO5BQ9ULV0 1848 aa34.18■■■■□ 3.06
R3HCC1-201ENST00000265806 PIK3C2GO75747 1445 aa34.18■■■■□ 3.06
R3HCC1-201ENST00000265806 ZFYVE9O95405 1425 aa34.17■■■■□ 3.06
R3HCC1-201ENST00000265806 VGFO15240 615 aaPredicted RBP34.16■■■■□ 3.06
R3HCC1-201ENST00000265806 KIF7Q2M1P5 1343 aa34.15■■■■□ 3.06
R3HCC1-201ENST00000265806 IQGAP1P46940 1657 aa34.15■■■■□ 3.06
R3HCC1-201ENST00000265806 CFAP70Q5T0N1 1121 aa34.13■■■■□ 3.05
R3HCC1-201ENST00000265806 FER1L4A9Z1Z3 1794 aa34.12■■■■□ 3.05
R3HCC1-201ENST00000265806 SCAF11Q99590 1463 aaKnown RBP34.12■■■■□ 3.05
R3HCC1-201ENST00000265806 TNRQ92752 1358 aa34.12■■■■□ 3.05
R3HCC1-201ENST00000265806 SETBP1Q9Y6X0 1596 aa34.1■■■■□ 3.05
R3HCC1-201ENST00000265806 A2ML1A8K2U0 1454 aa34.09■■■■□ 3.05
R3HCC1-201ENST00000265806 C14orf93Q9H972 538 aaKnown RBP34.08■■■■□ 3.05
R3HCC1-201ENST00000265806 STAG3Q9UJ98 1225 aa34.08■■■■□ 3.05
R3HCC1-201ENST00000265806 C3P01024 1663 aa34.05■■■■□ 3.04
R3HCC1-201ENST00000265806 KDM5AP29375 1690 aaKnown RBP34.03■■■■□ 3.04
R3HCC1-201ENST00000265806 TESK2Q96S53 571 aa34.03■■■■□ 3.04
R3HCC1-201ENST00000265806 EIF3AQ14152 1382 aaKnown RBP34.01■■■■□ 3.03
R3HCC1-201ENST00000265806 ADGRB1O14514 1584 aa34■■■■□ 3.03
R3HCC1-201ENST00000265806 NUTM2DQ5VT03 806 aaPredicted RBP33.99■■■■□ 3.03
R3HCC1-201ENST00000265806 NLRP1Q9C000 1473 aa33.99■■■■□ 3.03
R3HCC1-201ENST00000265806 CEBPAP49715 358 aaPredicted RBP33.96■■■■□ 3.03
R3HCC1-201ENST00000265806 RIMS2Q9UQ26 1411 aa33.95■■■■□ 3.03
R3HCC1-201ENST00000265806 UBR1Q8IWV7 1749 aa33.92■■■■□ 3.02
R3HCC1-201ENST00000265806 ADAMTSL3P82987 1691 aa33.91■■■■□ 3.02
R3HCC1-201ENST00000265806 ANP32CO43423 234 aa33.9■■■■□ 3.02
R3HCC1-201ENST00000265806 TMF1P82094 1093 aa33.9■■■■□ 3.02
R3HCC1-201ENST00000265806 MYO3AQ8NEV4 1616 aa33.89■■■■□ 3.02
R3HCC1-201ENST00000265806 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.88■■■■□ 3.01
R3HCC1-201ENST00000265806 DISP3Q9P2K9 1392 aa33.88■■■■□ 3.01
R3HCC1-201ENST00000265806 SLC24A1O60721 1099 aa33.86■■■■□ 3.01
R3HCC1-201ENST00000265806 RIMS1Q86UR5 1692 aaKnown RBP33.86■■■■□ 3.01
R3HCC1-201ENST00000265806 POLR3GLQ9BT43 218 aa33.85■■■■□ 3.01
R3HCC1-201ENST00000265806 HDGFP51858 240 aaKnown RBP33.85■■■■□ 3.01
R3HCC1-201ENST00000265806 TMEM132EQ6IEE7 984 aa33.85■■■■□ 3.01
R3HCC1-201ENST00000265806 TMEM2Q9UHN6 1383 aa33.84■■■■□ 3.01
R3HCC1-201ENST00000265806 SBNO2Q9Y2G9 1366 aa33.84■■■■□ 3.01
R3HCC1-201ENST00000265806 ALKQ9UM73 1620 aa33.83■■■■□ 3.01
R3HCC1-201ENST00000265806 ASXL1Q8IXJ9 1541 aa33.82■■■■□ 3.01
R3HCC1-201ENST00000265806 TRAK1Q9UPV9 953 aa33.79■■■■□ 3
R3HCC1-201ENST00000265806 CENPJQ9HC77 1338 aaPredicted RBP33.78■■■■□ 3
R3HCC1-201ENST00000265806 CDCA8Q53HL2 280 aa33.77■■■■□ 3
R3HCC1-201ENST00000265806 ARHGEF28Q8N1W1 1705 aaKnown RBP33.74■■■□□ 2.99
R3HCC1-201ENST00000265806 CCER2I3L3R5 266 aa33.74■■■□□ 2.99
R3HCC1-201ENST00000265806 PLPPR3Q6T4P5 718 aa33.74■■■□□ 2.99
R3HCC1-201ENST00000265806 NRXN3Q9Y4C0 1643 aa33.73■■■□□ 2.99
R3HCC1-201ENST00000265806 SETD1AO15047 1707 aaKnown RBP33.73■■■□□ 2.99
R3HCC1-201ENST00000265806 PTPRMP28827 1452 aa33.72■■■□□ 2.99
R3HCC1-201ENST00000265806 SLIT1O75093 1534 aa33.72■■■□□ 2.99
R3HCC1-201ENST00000265806 YTHDC2Q9H6S0 1430 aaKnown RBP33.71■■■□□ 2.99
R3HCC1-201ENST00000265806 ARHGAP23Q9P227 1491 aa33.71■■■□□ 2.99
R3HCC1-201ENST00000265806 QRICH2Q9H0J4 1663 aa33.7■■■□□ 2.98
R3HCC1-201ENST00000265806 THEMISQ8N1K5 641 aaPredicted RBP33.67■■■□□ 2.98
R3HCC1-201ENST00000265806 SENP3Q9H4L4 574 aaPredicted RBP33.67■■■□□ 2.98
R3HCC1-201ENST00000265806 PRKRIP1Q9H875 184 aaPredicted RBP33.65■■■□□ 2.98
R3HCC1-201ENST00000265806 CEP170BQ9Y4F5 1589 aaPredicted RBP33.65■■■□□ 2.98
R3HCC1-201ENST00000265806 PLEKHG1Q9ULL1 1385 aa33.64■■■□□ 2.98
R3HCC1-201ENST00000265806 SETD1BQ9UPS6 1966 aaKnown RBP33.62■■■□□ 2.97
R3HCC1-201ENST00000265806 LTKP29376 864 aa33.62■■■□□ 2.97
R3HCC1-201ENST00000265806 EID1Q9Y6B2 187 aa33.62■■■□□ 2.97
R3HCC1-201ENST00000265806 LRPPRCP42704 1394 aaKnown RBP33.62■■■□□ 2.97
R3HCC1-201ENST00000265806 TXNDC2Q86VQ3 553 aa33.61■■■□□ 2.97
R3HCC1-201ENST00000265806 STK26Q9P289 416 aa33.61■■■□□ 2.97
R3HCC1-201ENST00000265806 DLC1Q96QB1 1528 aa33.61■■■□□ 2.97
R3HCC1-201ENST00000265806 ZNF142P52746 1687 aaPredicted RBP33.59■■■□□ 2.97
R3HCC1-201ENST00000265806 ABCC11Q96J66 1382 aa33.58■■■□□ 2.97
R3HCC1-201ENST00000265806 ADAMTS13Q76LX8 1427 aa33.57■■■□□ 2.96
R3HCC1-201ENST00000265806 MYOM1P52179 1685 aa33.56■■■□□ 2.96
R3HCC1-201ENST00000265806 PER1O15534 1290 aaPredicted RBP33.56■■■□□ 2.96
R3HCC1-201ENST00000265806 METP08581 1390 aa33.56■■■□□ 2.96
R3HCC1-201ENST00000265806 PUS7Q96PZ0 661 aaKnown RBP33.55■■■□□ 2.96
R3HCC1-201ENST00000265806 PANK3Q9H999 370 aa33.55■■■□□ 2.96
R3HCC1-201ENST00000265806 MED14O60244 1454 aa33.53■■■□□ 2.96
R3HCC1-201ENST00000265806 PRAM1Q96QH2 718 aa33.52■■■□□ 2.96
R3HCC1-201ENST00000265806 EVC2Q86UK5 1308 aa33.51■■■□□ 2.95
R3HCC1-201ENST00000265806 BCANQ96GW7 911 aa33.51■■■□□ 2.95
R3HCC1-201ENST00000265806 TULP4Q9NRJ4 1543 aa33.5■■■□□ 2.95
R3HCC1-201ENST00000265806 TECPR2O15040 1411 aa33.5■■■□□ 2.95
R3HCC1-201ENST00000265806 KTN1Q86UP2 1357 aaKnown RBP33.5■■■□□ 2.95
R3HCC1-201ENST00000265806 KNDC1Q76NI1 1749 aa33.5■■■□□ 2.95
R3HCC1-201ENST00000265806 POGKQ9P215 609 aa33.49■■■□□ 2.95
R3HCC1-201ENST00000265806 YTHDC1Q96MU7 727 aaKnown RBP33.48■■■□□ 2.95
R3HCC1-201ENST00000265806 SIRT1Q96EB6 747 aa33.47■■■□□ 2.95
R3HCC1-201ENST00000265806 SAFB2Q14151 953 aaKnown RBP eCLIP33.44■■■□□ 2.94
R3HCC1-201ENST00000265806 DIP2AQ14689 1571 aa33.44■■■□□ 2.94
R3HCC1-201ENST00000265806 FAM135BQ49AJ0 1406 aa33.44■■■□□ 2.94
R3HCC1-201ENST00000265806 CPS1P31327 1500 aa33.43■■■□□ 2.94
R3HCC1-201ENST00000265806 TBX22Q9Y458 520 aa33.43■■■□□ 2.94
R3HCC1-201ENST00000265806 RALBP1Q15311 655 aa33.42■■■□□ 2.94
R3HCC1-201ENST00000265806 MINK1Q8N4C8 1332 aaPredicted RBP33.39■■■□□ 2.93
R3HCC1-201ENST00000265806 PARD3Q8TEW0 1356 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms