RNA–Protein interactions for RNA: ENST00000261349.8

LRP6-201, Transcript of LDL receptor related protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP6, Length 10,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-201ENST00000261349 ERBB4Q15303 1308 aa5.95□□□□□ -1.46
LRP6-201ENST00000261349 SMC4Q9NTJ3 1288 aa5.95□□□□□ -1.46
LRP6-201ENST00000261349 RNF123Q5XPI4 1314 aa5.95□□□□□ -1.46
LRP6-201ENST00000261349 ST18O60284 1047 aa5.95□□□□□ -1.46
LRP6-201ENST00000261349 DMTNQ08495 405 aa5.95□□□□□ -1.46
LRP6-201ENST00000261349 CUX1P39880 1505 aa5.95□□□□□ -1.46
LRP6-201ENST00000261349 IGSF3O75054 1194 aa5.95□□□□□ -1.46
LRP6-201ENST00000261349 SSFA2P28290 1259 aa5.95□□□□□ -1.46
LRP6-201ENST00000261349 CDCA8Q53HL2 280 aa5.94□□□□□ -1.46
LRP6-201ENST00000261349 GOLGA6L4A6NEF3 574 aa5.94□□□□□ -1.46
LRP6-201ENST00000261349 ZRSR1Q15695 479 aaKnown RBP5.94□□□□□ -1.46
LRP6-201ENST00000261349 DIAPH3Q9NSV4 1193 aa5.94□□□□□ -1.46
LRP6-201ENST00000261349 NCAPD3P42695 1498 aa5.94□□□□□ -1.46
LRP6-201ENST00000261349 FAM177BA6PVY3 158 aa5.94□□□□□ -1.46
LRP6-201ENST00000261349 IPO4Q8TEX9 1081 aaKnown RBP5.94□□□□□ -1.46
LRP6-201ENST00000261349 TBC1D32Q96NH3 1257 aa5.94□□□□□ -1.46
LRP6-201ENST00000261349 MIA2Q96PC5 1412 aa5.94□□□□□ -1.46
LRP6-201ENST00000261349 APAF1O14727 1248 aa5.93□□□□□ -1.46
LRP6-201ENST00000261349 GOLGA6L1Q8N7Z2 621 aa5.93□□□□□ -1.46
LRP6-201ENST00000261349 CFDP1Q9UEE9 299 aaPredicted RBP5.93□□□□□ -1.46
LRP6-201ENST00000261349 CIZ1Q9ULV3 898 aaPredicted RBP5.93□□□□□ -1.46
LRP6-201ENST00000261349 PTPN23Q9H3S7 1636 aa5.93□□□□□ -1.46
LRP6-201ENST00000261349 KDM2BQ8NHM5 1336 aa5.93□□□□□ -1.46
LRP6-201ENST00000261349 NRDCO43847 1150 aa5.93□□□□□ -1.46
LRP6-201ENST00000261349 TEX35Q5T0J7 233 aa5.93□□□□□ -1.46
LRP6-201ENST00000261349 MCCP23508 829 aa5.93□□□□□ -1.46
LRP6-201ENST00000261349 ZKSCAN2Q63HK3 967 aa5.93□□□□□ -1.46
LRP6-201ENST00000261349 NINLQ9Y2I6 1382 aa5.93□□□□□ -1.46
LRP6-201ENST00000261349 MCM5P33992 734 aa5.92□□□□□ -1.46
LRP6-201ENST00000261349 NUCB2P80303 420 aa5.92□□□□□ -1.46
LRP6-201ENST00000261349 FSD2A1L4K1 749 aa5.92□□□□□ -1.46
LRP6-201ENST00000261349 PLEKHH2Q8IVE3 1493 aa5.92□□□□□ -1.46
LRP6-201ENST00000261349 K7ELQ4 463 aaPredicted RBP5.92□□□□□ -1.46
LRP6-201ENST00000261349 TSPYL1Q9H0U9 437 aa5.92□□□□□ -1.46
LRP6-201ENST00000261349 NUP155O75694 1391 aa5.92□□□□□ -1.46
LRP6-201ENST00000261349 MORC1Q86VD1 984 aa5.92□□□□□ -1.46
LRP6-201ENST00000261349 DZIP1LQ8IYY4 767 aaKnown RBP5.92□□□□□ -1.46
LRP6-201ENST00000261349 SEC24BO95487 1268 aa5.92□□□□□ -1.46
LRP6-201ENST00000261349 ZSCAN23Q3MJ62 389 aa5.92□□□□□ -1.46
LRP6-201ENST00000261349 NBPF1Q3BBV0 1214 aa5.91□□□□□ -1.46
LRP6-201ENST00000261349 TSC1Q92574 1164 aa5.91□□□□□ -1.46
LRP6-201ENST00000261349 SPC24Q8NBT2 197 aa5.91□□□□□ -1.46
LRP6-201ENST00000261349 PRM3Q9NNZ6 103 aa5.91□□□□□ -1.46
LRP6-201ENST00000261349 NAIPQ13075 1403 aa5.91□□□□□ -1.46
LRP6-201ENST00000261349 PRXQ9BXM0 1461 aa5.91□□□□□ -1.46
LRP6-201ENST00000261349 CCDC112Q8NEF3 446 aa5.91□□□□□ -1.46
LRP6-201ENST00000261349 DNAJC2Q99543 621 aaKnown RBP5.91□□□□□ -1.46
LRP6-201ENST00000261349 LRPPRCP42704 1394 aaKnown RBP5.91□□□□□ -1.46
LRP6-201ENST00000261349 FYCO1Q9BQS8 1478 aa5.91□□□□□ -1.46
LRP6-201ENST00000261349 RBM27Q9P2N5 1060 aaKnown RBP5.91□□□□□ -1.46
LRP6-201ENST00000261349 CDC45O75419 566 aa5.91□□□□□ -1.46
LRP6-201ENST00000261349 KIF20AO95235 890 aa5.91□□□□□ -1.46
LRP6-201ENST00000261349 NOL7Q9UMY1 257 aaKnown RBP5.91□□□□□ -1.46
LRP6-201ENST00000261349 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.91□□□□□ -1.46
LRP6-201ENST00000261349 ZFP91Q96JP5 570 aaPredicted RBP5.91□□□□□ -1.46
LRP6-201ENST00000261349 ANKRD30AQ9BXX3 1397 aa5.91□□□□□ -1.46
LRP6-201ENST00000261349 IPO8O15397 1037 aaKnown RBP5.91□□□□□ -1.46
LRP6-201ENST00000261349 IGHDP01880 384 aa5.91□□□□□ -1.46
LRP6-201ENST00000261349 UTP14CQ5TAP6 766 aaKnown RBP5.91□□□□□ -1.46
LRP6-201ENST00000261349 ZKSCAN5Q9Y2L8 839 aa5.91□□□□□ -1.46
LRP6-201ENST00000261349 PCF11O94913 1555 aaKnown RBP5.9□□□□□ -1.46
LRP6-201ENST00000261349 MBD3O95983 291 aa5.9□□□□□ -1.46
LRP6-201ENST00000261349 NOM1Q5C9Z4 860 aaKnown RBP5.9□□□□□ -1.46
LRP6-201ENST00000261349 TIGD1Q96MW7 591 aa5.9□□□□□ -1.46
LRP6-201ENST00000261349 DHX29Q7Z478 1369 aaKnown RBP5.9□□□□□ -1.46
LRP6-201ENST00000261349 NPHP1O15259 732 aa5.9□□□□□ -1.46
LRP6-201ENST00000261349 AQRO60306 1485 aaKnown RBP eCLIP5.9□□□□□ -1.461e-6■■■■□ 26.1
LRP6-201ENST00000261349 LNPKQ9C0E8 428 aa5.9□□□□□ -1.46
LRP6-201ENST00000261349 CASKIN1Q8WXD9 1431 aa5.9□□□□□ -1.46
LRP6-201ENST00000261349 CWC15Q9P013 229 aaKnown RBP5.9□□□□□ -1.46
LRP6-201ENST00000261349 ANKRD45Q5TZF3 282 aa5.9□□□□□ -1.46
LRP6-201ENST00000261349 PRIMPOLQ96LW4 560 aa5.9□□□□□ -1.46
LRP6-201ENST00000261349 CFTRP13569 1480 aa5.9□□□□□ -1.47
LRP6-201ENST00000261349 TPM3P06753 285 aa5.9□□□□□ -1.47
LRP6-201ENST00000261349 KLHL40Q2TBA0 621 aa5.9□□□□□ -1.47
LRP6-201ENST00000261349 TERF1P54274 439 aa5.9□□□□□ -1.47
LRP6-201ENST00000261349 GPS2Q13227 327 aa5.9□□□□□ -1.47
LRP6-201ENST00000261349 SENP3Q9H4L4 574 aaPredicted RBP5.9□□□□□ -1.47
LRP6-201ENST00000261349 ESF1Q9H501 851 aaKnown RBP5.9□□□□□ -1.47
LRP6-201ENST00000261349 CLSTN1O94985 981 aa5.89□□□□□ -1.47
LRP6-201ENST00000261349 TRIM6-TRIM34B2RNG4 842 aa5.89□□□□□ -1.47
LRP6-201ENST00000261349 TSPY4P0CV99 314 aa5.89□□□□□ -1.47
LRP6-201ENST00000261349 TSPY10P0CW01 314 aa5.89□□□□□ -1.47
LRP6-201ENST00000261349 C17orf53Q8N3J3 647 aaPredicted RBP5.89□□□□□ -1.47
LRP6-201ENST00000261349 TRIM34Q9BYJ4 488 aa5.89□□□□□ -1.47
LRP6-201ENST00000261349 RIPK4P57078 832 aa5.89□□□□□ -1.47
LRP6-201ENST00000261349 RABEP1Q15276 862 aa5.89□□□□□ -1.47
LRP6-201ENST00000261349 TPD52L1Q16890 204 aaPredicted RBP5.89□□□□□ -1.47
LRP6-201ENST00000261349 HS1BP3Q53T59 392 aa5.89□□□□□ -1.47
LRP6-201ENST00000261349 DDX19BQ9UMR2 479 aa5.89□□□□□ -1.47
LRP6-201ENST00000261349 ZNF830Q96NB3 372 aaPredicted RBP5.89□□□□□ -1.47
LRP6-201ENST00000261349 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.89□□□□□ -1.47
LRP6-201ENST00000261349 U2AF1L5P0DN76 240 aaPredicted RBP5.89□□□□□ -1.47
LRP6-201ENST00000261349 U2AF1Q01081 240 aaKnown RBP eCLIP5.89□□□□□ -1.47
LRP6-201ENST00000261349 GTF2F1P35269 517 aaKnown RBP eCLIP5.89□□□□□ -1.47
LRP6-201ENST00000261349 CALCOCO1Q9P1Z2 691 aa5.89□□□□□ -1.47
LRP6-201ENST00000261349 HTATSF1O43719 755 aaKnown RBP5.89□□□□□ -1.47
LRP6-201ENST00000261349 PDE3AQ14432 1141 aa5.89□□□□□ -1.47
LRP6-201ENST00000261349 CERS3Q8IU89 383 aa5.89□□□□□ -1.47
LRP6-201ENST00000261349 PPP2R1AP30153 589 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms