RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 GSE1Q14687 1217 aa17.16■□□□□ 0.34
PGBD1-201ENST00000259883 SAFB2Q14151 953 aaKnown RBP eCLIP17.15■□□□□ 0.34
PGBD1-201ENST00000259883 KIF3BO15066 747 aa17.14■□□□□ 0.34
PGBD1-201ENST00000259883 SLFN5Q08AF3 891 aa17.14■□□□□ 0.34
PGBD1-201ENST00000259883 KDM2BQ8NHM5 1336 aa17.14■□□□□ 0.33
PGBD1-201ENST00000259883 SEC24BO95487 1268 aa17.14■□□□□ 0.33
PGBD1-201ENST00000259883 SAMD9LQ8IVG5 1584 aa17.13■□□□□ 0.33
PGBD1-201ENST00000259883 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
PGBD1-201ENST00000259883 SHANK2Q9UPX8 1470 aa17.13■□□□□ 0.33
PGBD1-201ENST00000259883 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
PGBD1-201ENST00000259883 RSPH4AQ5TD94 716 aa17.11■□□□□ 0.33
PGBD1-201ENST00000259883 TRPM1Q7Z4N2 1603 aa17.11■□□□□ 0.33
PGBD1-201ENST00000259883 ABCA8O94911 1581 aa17.11■□□□□ 0.33
PGBD1-201ENST00000259883 USP35Q9P2H5 1018 aa17.1■□□□□ 0.33
PGBD1-201ENST00000259883 SPAG9O60271 1321 aaKnown RBP17.1■□□□□ 0.33
PGBD1-201ENST00000259883 WASHC2CQ9Y4E1 1318 aa17.09■□□□□ 0.33
PGBD1-201ENST00000259883 EFCAB2Q5VUJ9 269 aa17.09■□□□□ 0.33
PGBD1-201ENST00000259883 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
PGBD1-201ENST00000259883 NUP160Q12769 1436 aa17.09■□□□□ 0.33
PGBD1-201ENST00000259883 CARD14Q9BXL6 1004 aa17.08■□□□□ 0.33
PGBD1-201ENST00000259883 ADCY10Q96PN6 1610 aa17.08■□□□□ 0.32
PGBD1-201ENST00000259883 E9PCH4 1651 aa17.08■□□□□ 0.32
PGBD1-201ENST00000259883 GPRASP1Q5JY77 1395 aa17.08■□□□□ 0.32
PGBD1-201ENST00000259883 ZMYM4Q5VZL5 1548 aa17.08■□□□□ 0.32
PGBD1-201ENST00000259883 CENPJQ9HC77 1338 aaPredicted RBP17.07■□□□□ 0.32
PGBD1-201ENST00000259883 CDCA8Q53HL2 280 aa17.07■□□□□ 0.32
PGBD1-201ENST00000259883 SLC12A5Q9H2X9 1139 aa17.07■□□□□ 0.32
PGBD1-201ENST00000259883 ADGRF5Q8IZF2 1346 aa17.07■□□□□ 0.32
PGBD1-201ENST00000259883 MORC1Q86VD1 984 aa17.06■□□□□ 0.32
PGBD1-201ENST00000259883 WDR7Q9Y4E6 1490 aa17.05■□□□□ 0.32
PGBD1-201ENST00000259883 TRAPPC8Q9Y2L5 1435 aa17.04■□□□□ 0.32
PGBD1-201ENST00000259883 TTC37Q6PGP7 1564 aa17.04■□□□□ 0.32
PGBD1-201ENST00000259883 GZF1Q9H116 711 aaPredicted RBP17.04■□□□□ 0.32
PGBD1-201ENST00000259883 POGKQ9P215 609 aa17.04■□□□□ 0.32
PGBD1-201ENST00000259883 CDC42BPBQ9Y5S2 1711 aa17.04■□□□□ 0.32
PGBD1-201ENST00000259883 E9PSI1 815 aa17.03■□□□□ 0.32
PGBD1-201ENST00000259883 ZNF521Q96K83 1311 aa17.03■□□□□ 0.32
PGBD1-201ENST00000259883 RLBP1P12271 317 aa17.03■□□□□ 0.32
PGBD1-201ENST00000259883 WWC1Q8IX03 1113 aa17.02■□□□□ 0.31
PGBD1-201ENST00000259883 PRDM15P57071 1507 aaPredicted RBP17.01■□□□□ 0.31
PGBD1-201ENST00000259883 GGT6Q6P531 493 aa17.01■□□□□ 0.31
PGBD1-201ENST00000259883 TCP11L2Q8N4U5 519 aa17.01■□□□□ 0.31
PGBD1-201ENST00000259883 U2SURPO15042 1029 aaKnown RBP17■□□□□ 0.31
PGBD1-201ENST00000259883 U2AF1L5P0DN76 240 aaPredicted RBP16.99■□□□□ 0.31
PGBD1-201ENST00000259883 U2AF1Q01081 240 aaKnown RBP eCLIP16.99■□□□□ 0.31
PGBD1-201ENST00000259883 TSR2Q969E8 191 aaKnown RBP16.99■□□□□ 0.31
PGBD1-201ENST00000259883 PCDHB15Q9Y5E8 787 aa16.99■□□□□ 0.31
PGBD1-201ENST00000259883 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.98■□□□□ 0.31
PGBD1-201ENST00000259883 MTHFSP49914 203 aa16.98■□□□□ 0.31
PGBD1-201ENST00000259883 STK26Q9P289 416 aa16.98■□□□□ 0.31
PGBD1-201ENST00000259883 ARHGEF5Q12774 1597 aa16.98■□□□□ 0.31
PGBD1-201ENST00000259883 NKTRP30414 1462 aaKnown RBP16.97■□□□□ 0.31
PGBD1-201ENST00000259883 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
PGBD1-201ENST00000259883 MYO5CQ9NQX4 1742 aa16.97■□□□□ 0.31
PGBD1-201ENST00000259883 MFAP1P55081 439 aaKnown RBP16.96■□□□□ 0.31
PGBD1-201ENST00000259883 UGGT1Q9NYU2 1555 aa16.95■□□□□ 0.3
PGBD1-201ENST00000259883 PDZRN3Q9UPQ7 1066 aa16.95■□□□□ 0.3
PGBD1-201ENST00000259883 ASXL1Q8IXJ9 1541 aa16.95■□□□□ 0.3
PGBD1-201ENST00000259883 FTSJ3Q8IY81 847 aaKnown RBP16.95■□□□□ 0.3
PGBD1-201ENST00000259883 SCAF11Q99590 1463 aaKnown RBP16.94■□□□□ 0.3
PGBD1-201ENST00000259883 SCAPERQ9BY12 1400 aa16.93■□□□□ 0.3
PGBD1-201ENST00000259883 PREX2Q70Z35 1606 aa16.93■□□□□ 0.3
PGBD1-201ENST00000259883 PRKCSHP14314 528 aaPredicted RBP16.93■□□□□ 0.3
PGBD1-201ENST00000259883 UPF2Q9HAU5 1272 aaKnown RBP16.93■□□□□ 0.3
PGBD1-201ENST00000259883 CGNL1Q0VF96 1302 aa16.93■□□□□ 0.3
PGBD1-201ENST00000259883 USP19O94966 1318 aa16.93■□□□□ 0.3
PGBD1-201ENST00000259883 RARSP54136 660 aaKnown RBP16.92■□□□□ 0.3
PGBD1-201ENST00000259883 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
PGBD1-201ENST00000259883 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
PGBD1-201ENST00000259883 BECN1Q14457 450 aa16.92■□□□□ 0.3
PGBD1-201ENST00000259883 CABP2Q9NPB3 220 aa16.92■□□□□ 0.3
PGBD1-201ENST00000259883 NSD3Q9BZ95 1437 aa16.91■□□□□ 0.3
PGBD1-201ENST00000259883 TRMT2AQ8IZ69 625 aaKnown RBP16.91■□□□□ 0.3
PGBD1-201ENST00000259883 ITPRIPQ8IWB1 547 aa16.9■□□□□ 0.3
PGBD1-201ENST00000259883 KANK1Q14678 1352 aa16.9■□□□□ 0.3
PGBD1-201ENST00000259883 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
PGBD1-201ENST00000259883 DUOX2Q9NRD8 1548 aa16.89■□□□□ 0.29
PGBD1-201ENST00000259883 GGNBP2Q9H3C7 697 aa16.89■□□□□ 0.29
PGBD1-201ENST00000259883 SMC4Q9NTJ3 1288 aa16.89■□□□□ 0.29
PGBD1-201ENST00000259883 FBLN1P23142 703 aa16.89■□□□□ 0.29
PGBD1-201ENST00000259883 RUNDC1Q96C34 613 aa16.88■□□□□ 0.29
PGBD1-201ENST00000259883 MAST1Q9Y2H9 1570 aa16.88■□□□□ 0.29
PGBD1-201ENST00000259883 ATP10AO60312 1499 aa16.88■□□□□ 0.29
PGBD1-201ENST00000259883 EIF2AK4Q9P2K8 1649 aaKnown RBP16.88■□□□□ 0.29
PGBD1-201ENST00000259883 PDE3AQ14432 1141 aa16.87■□□□□ 0.29
PGBD1-201ENST00000259883 PIK3C2GO75747 1445 aa16.87■□□□□ 0.29
PGBD1-201ENST00000259883 TBC1D2Q9BYX2 928 aa16.86■□□□□ 0.29
PGBD1-201ENST00000259883 UNC13BO14795 1591 aa16.85■□□□□ 0.29
PGBD1-201ENST00000259883 CFAP53Q96M91 514 aa16.85■□□□□ 0.29
PGBD1-201ENST00000259883 MAPK8IP3Q9UPT6 1336 aa16.85■□□□□ 0.29
PGBD1-201ENST00000259883 ELL2O00472 640 aaPredicted RBP16.85■□□□□ 0.29
PGBD1-201ENST00000259883 SRPK2P78362 688 aaKnown RBP16.85■□□□□ 0.29
PGBD1-201ENST00000259883 EXOSC9Q06265 439 aaKnown RBP16.85■□□□□ 0.29
PGBD1-201ENST00000259883 PLCH2O75038 1416 aa16.85■□□□□ 0.29
PGBD1-201ENST00000259883 IQGAP3Q86VI3 1631 aa16.84■□□□□ 0.29
PGBD1-201ENST00000259883 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.29
PGBD1-201ENST00000259883 RWDD1Q9H446 243 aaPredicted RBP16.83■□□□□ 0.28
PGBD1-201ENST00000259883 NOS1P29475 1434 aa16.83■□□□□ 0.28
PGBD1-201ENST00000259883 ERVK-7P63135 1459 aa16.83■□□□□ 0.28
PGBD1-201ENST00000259883 MADDQ8WXG6 1647 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms