RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 ABCC2Q92887 1545 aa18.91■□□□□ 0.62
KCTD3-201ENST00000259154 GOLGA2Q08379 1002 aa18.91■□□□□ 0.62
KCTD3-201ENST00000259154 ARHGEF5Q12774 1597 aa18.91■□□□□ 0.62
KCTD3-201ENST00000259154 PANK3Q9H999 370 aa18.91■□□□□ 0.62
KCTD3-201ENST00000259154 POGKQ9P215 609 aa18.91■□□□□ 0.62
KCTD3-201ENST00000259154 ESF1Q9H501 851 aaKnown RBP18.9■□□□□ 0.62
KCTD3-201ENST00000259154 RALBP1Q15311 655 aa18.9■□□□□ 0.62
KCTD3-201ENST00000259154 KDM5CP41229 1560 aa18.9■□□□□ 0.62
KCTD3-201ENST00000259154 TTC37Q6PGP7 1564 aa18.89■□□□□ 0.61
KCTD3-201ENST00000259154 SAMD9LQ8IVG5 1584 aa18.89■□□□□ 0.61
KCTD3-201ENST00000259154 UHRF1BP1LA0JNW5 1464 aa18.89■□□□□ 0.61
KCTD3-201ENST00000259154 ZCCHC11Q5TAX3 1644 aaKnown RBP18.88■□□□□ 0.61
KCTD3-201ENST00000259154 SAFB2Q14151 953 aaKnown RBP eCLIP18.88■□□□□ 0.61
KCTD3-201ENST00000259154 SHANK2Q9UPX8 1470 aa18.88■□□□□ 0.61
KCTD3-201ENST00000259154 TMF1P82094 1093 aa18.88■□□□□ 0.61
KCTD3-201ENST00000259154 C20orf194Q5TEA3 1177 aa18.88■□□□□ 0.61
KCTD3-201ENST00000259154 MYBBP1AQ9BQG0 1328 aaKnown RBP18.87■□□□□ 0.61
KCTD3-201ENST00000259154 FOXD4L6Q3SYB3 417 aaPredicted RBP18.87■□□□□ 0.61
KCTD3-201ENST00000259154 EFCAB2Q5VUJ9 269 aa18.87■□□□□ 0.61
KCTD3-201ENST00000259154 FOXD4L3Q6VB84 417 aaPredicted RBP18.87■□□□□ 0.61
KCTD3-201ENST00000259154 APAF1O14727 1248 aa18.87■□□□□ 0.61
KCTD3-201ENST00000259154 GGT6Q6P531 493 aa18.87■□□□□ 0.61
KCTD3-201ENST00000259154 MS4A1P11836 297 aa18.86■□□□□ 0.61
KCTD3-201ENST00000259154 CENPQQ7L2Z9 268 aaPredicted RBP18.85■□□□□ 0.61
KCTD3-201ENST00000259154 PLEKHG5O94827 1062 aa18.85■□□□□ 0.61
KCTD3-201ENST00000259154 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.85■□□□□ 0.61
KCTD3-201ENST00000259154 A0A0U1RQG5 324 aaPredicted RBP18.85■□□□□ 0.61
KCTD3-201ENST00000259154 FAM13BQ9NYF5 915 aa18.85■□□□□ 0.61
KCTD3-201ENST00000259154 DISP3Q9P2K9 1392 aa18.85■□□□□ 0.61
KCTD3-201ENST00000259154 PANK1Q8TE04 598 aa18.83■□□□□ 0.61
KCTD3-201ENST00000259154 MAST1Q9Y2H9 1570 aa18.83■□□□□ 0.61
KCTD3-201ENST00000259154 CCDC144AA2RUR9 1427 aa18.83■□□□□ 0.6
KCTD3-201ENST00000259154 AFAP1Q8N556 730 aa18.83■□□□□ 0.6
KCTD3-201ENST00000259154 PLEKHH2Q8IVE3 1493 aa18.83■□□□□ 0.6
KCTD3-201ENST00000259154 SMG6Q86US8 1419 aaKnown RBP18.83■□□□□ 0.6
KCTD3-201ENST00000259154 KDM5DQ9BY66 1539 aa18.82■□□□□ 0.6
KCTD3-201ENST00000259154 ITPRIPQ8IWB1 547 aa18.82■□□□□ 0.6
KCTD3-201ENST00000259154 SYCP2Q9BX26 1530 aa18.82■□□□□ 0.6
KCTD3-201ENST00000259154 NOL8Q76FK4 1167 aaKnown RBP18.81■□□□□ 0.6
KCTD3-201ENST00000259154 RALGAPBQ86X10 1494 aa18.81■□□□□ 0.6
KCTD3-201ENST00000259154 KIF3BO15066 747 aa18.81■□□□□ 0.6
KCTD3-201ENST00000259154 MYO5CQ9NQX4 1742 aa18.81■□□□□ 0.6
KCTD3-201ENST00000259154 PDE3BQ13370 1112 aa18.79■□□□□ 0.6
KCTD3-201ENST00000259154 ADAMTS8Q9UP79 889 aa18.79■□□□□ 0.6
KCTD3-201ENST00000259154 RBM10P98175 930 aaKnown RBP18.79■□□□□ 0.6
KCTD3-201ENST00000259154 TAOK2Q9UL54 1235 aa18.79■□□□□ 0.6
KCTD3-201ENST00000259154 FAM135AQ9P2D6 1515 aa18.79■□□□□ 0.6
KCTD3-201ENST00000259154 PLA2R1Q13018 1463 aa18.79■□□□□ 0.6
KCTD3-201ENST00000259154 ARHGAP5Q13017 1502 aa18.79■□□□□ 0.6
KCTD3-201ENST00000259154 PER1O15534 1290 aaPredicted RBP18.78■□□□□ 0.6
KCTD3-201ENST00000259154 TESK2Q96S53 571 aa18.77■□□□□ 0.6
KCTD3-201ENST00000259154 BCAR3O75815 825 aa18.76■□□□□ 0.59
KCTD3-201ENST00000259154 BCL11BQ9C0K0 894 aaPredicted RBP18.76■□□□□ 0.59
KCTD3-201ENST00000259154 MPNDQ8N594 471 aa18.75■□□□□ 0.59
KCTD3-201ENST00000259154 UHRF1BP1Q6BDS2 1440 aa18.75■□□□□ 0.59
KCTD3-201ENST00000259154 POLR1AO95602 1720 aaPredicted RBP18.75■□□□□ 0.59
KCTD3-201ENST00000259154 U2AF1L5P0DN76 240 aaPredicted RBP18.75■□□□□ 0.59
KCTD3-201ENST00000259154 U2AF1Q01081 240 aaKnown RBP eCLIP18.75■□□□□ 0.59
KCTD3-201ENST00000259154 SPAG9O60271 1321 aaKnown RBP18.75■□□□□ 0.59
KCTD3-201ENST00000259154 CENPJQ9HC77 1338 aaPredicted RBP18.75■□□□□ 0.59
KCTD3-201ENST00000259154 CCDC141Q6ZP82 1450 aa18.74■□□□□ 0.59
KCTD3-201ENST00000259154 PRAG1Q86YV5 1406 aa18.74■□□□□ 0.59
KCTD3-201ENST00000259154 PLXNC1O60486 1568 aa18.74■□□□□ 0.59
KCTD3-201ENST00000259154 ELL2O00472 640 aaPredicted RBP18.73■□□□□ 0.59
KCTD3-201ENST00000259154 MORC1Q86VD1 984 aa18.73■□□□□ 0.59
KCTD3-201ENST00000259154 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
KCTD3-201ENST00000259154 A2MP01023 1474 aa18.73■□□□□ 0.59
KCTD3-201ENST00000259154 NUTM2DQ5VT03 806 aaPredicted RBP18.72■□□□□ 0.59
KCTD3-201ENST00000259154 MLECQ14165 292 aa18.72■□□□□ 0.59
KCTD3-201ENST00000259154 RWDD1Q9H446 243 aaPredicted RBP18.71■□□□□ 0.59
KCTD3-201ENST00000259154 DDX49Q9Y6V7 483 aaKnown RBP18.71■□□□□ 0.59
KCTD3-201ENST00000259154 ARHGEF12Q9NZN5 1544 aa18.71■□□□□ 0.59
KCTD3-201ENST00000259154 CFAP53Q96M91 514 aa18.71■□□□□ 0.59
KCTD3-201ENST00000259154 GBP4Q96PP9 640 aa18.71■□□□□ 0.59
KCTD3-201ENST00000259154 UNC13BO14795 1591 aa18.7■□□□□ 0.58
KCTD3-201ENST00000259154 ARAP3Q8WWN8 1544 aa18.7■□□□□ 0.58
KCTD3-201ENST00000259154 SMC4Q9NTJ3 1288 aa18.7■□□□□ 0.58
KCTD3-201ENST00000259154 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
KCTD3-201ENST00000259154 RSPH4AQ5TD94 716 aa18.69■□□□□ 0.58
KCTD3-201ENST00000259154 LRPPRCP42704 1394 aaKnown RBP18.69■□□□□ 0.58
KCTD3-201ENST00000259154 RNF123Q5XPI4 1314 aa18.69■□□□□ 0.58
KCTD3-201ENST00000259154 BRD4O60885 1362 aaPredicted RBP18.68■□□□□ 0.58
KCTD3-201ENST00000259154 ABCA9Q8IUA7 1624 aa18.68■□□□□ 0.58
KCTD3-201ENST00000259154 FAM43AQ8N2R8 423 aa18.68■□□□□ 0.58
KCTD3-201ENST00000259154 KANK1Q14678 1352 aa18.67■□□□□ 0.58
KCTD3-201ENST00000259154 TRAK2O60296 914 aa18.67■□□□□ 0.58
KCTD3-201ENST00000259154 STK26Q9P289 416 aa18.67■□□□□ 0.58
KCTD3-201ENST00000259154 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
KCTD3-201ENST00000259154 SOX12O15370 315 aa18.66■□□□□ 0.58
KCTD3-201ENST00000259154 UBE2Q2Q8WVN8 375 aa18.66■□□□□ 0.58
KCTD3-201ENST00000259154 MAGI2Q86UL8 1455 aa18.65■□□□□ 0.58
KCTD3-201ENST00000259154 R3HCC1Q9Y3T6 440 aaKnown RBP18.65■□□□□ 0.58
KCTD3-201ENST00000259154 CALD1Q05682 793 aaKnown RBP18.64■□□□□ 0.57
KCTD3-201ENST00000259154 ABCC1P33527 1531 aa18.64■□□□□ 0.57
KCTD3-201ENST00000259154 PARD3Q8TEW0 1356 aa18.64■□□□□ 0.57
KCTD3-201ENST00000259154 PANK2Q9BZ23 570 aa18.63■□□□□ 0.57
KCTD3-201ENST00000259154 LNPKQ9C0E8 428 aa18.63■□□□□ 0.57
KCTD3-201ENST00000259154 ERBINQ96RT1 1412 aa18.62■□□□□ 0.57
KCTD3-201ENST00000259154 PMFBP1Q8TBY8 1022 aa18.62■□□□□ 0.57
KCTD3-201ENST00000259154 ZMYND15Q9H091 742 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms