RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 LTKP29376 864 aa17.28■□□□□ 0.36
NIP7-201ENST00000254940 NBPF8Q3BBV2 869 aa17.28■□□□□ 0.36
NIP7-201ENST00000254940 AEBP2Q6ZN18 517 aaPredicted RBP17.27■□□□□ 0.36
NIP7-201ENST00000254940 NLRP1Q9C000 1473 aa17.27■□□□□ 0.36
NIP7-201ENST00000254940 NCKAP5LQ9HCH0 1330 aa17.27■□□□□ 0.35
NIP7-201ENST00000254940 TXNDC2Q86VQ3 553 aa17.26■□□□□ 0.35
NIP7-201ENST00000254940 RIMS2Q9UQ26 1411 aa17.26■□□□□ 0.35
NIP7-201ENST00000254940 THEMISQ8N1K5 641 aaPredicted RBP17.24■□□□□ 0.35
NIP7-201ENST00000254940 PPLO60437 1756 aa17.23■□□□□ 0.35
NIP7-201ENST00000254940 NEXMIFQ5QGS0 1516 aa17.23■□□□□ 0.35
NIP7-201ENST00000254940 TMEM2Q9UHN6 1383 aa17.22■□□□□ 0.35
NIP7-201ENST00000254940 SLC26A8Q96RN1 970 aa17.22■□□□□ 0.35
NIP7-201ENST00000254940 LMTK3Q96Q04 1460 aa17.22■□□□□ 0.35
NIP7-201ENST00000254940 NBPF1Q3BBV0 1214 aa17.21■□□□□ 0.35
NIP7-201ENST00000254940 CFAP70Q5T0N1 1121 aa17.21■□□□□ 0.35
NIP7-201ENST00000254940 TMEM132EQ6IEE7 984 aa17.21■□□□□ 0.35
NIP7-201ENST00000254940 ZNF142P52746 1687 aaPredicted RBP17.2■□□□□ 0.34
NIP7-201ENST00000254940 IFT172Q9UG01 1749 aa17.2■□□□□ 0.34
NIP7-201ENST00000254940 MIER1Q8N108 512 aa17.19■□□□□ 0.34
NIP7-201ENST00000254940 EID1Q9Y6B2 187 aa17.19■□□□□ 0.34
NIP7-201ENST00000254940 ZFYVE9O95405 1425 aa17.18■□□□□ 0.34
NIP7-201ENST00000254940 VGFO15240 615 aaPredicted RBP17.17■□□□□ 0.34
NIP7-201ENST00000254940 ANKLE2Q86XL3 938 aa17.16■□□□□ 0.34
NIP7-201ENST00000254940 STK26Q9P289 416 aa17.16■□□□□ 0.34
NIP7-201ENST00000254940 PRAG1Q86YV5 1406 aa17.15■□□□□ 0.34
NIP7-201ENST00000254940 IQGAP1P46940 1657 aa17.14■□□□□ 0.33
NIP7-201ENST00000254940 RPGRIP1LQ68CZ1 1315 aa17.14■□□□□ 0.33
NIP7-201ENST00000254940 SCAF11Q99590 1463 aaKnown RBP17.13■□□□□ 0.33
NIP7-201ENST00000254940 RBM33Q96EV2 1170 aaKnown RBP17.12■□□□□ 0.33
NIP7-201ENST00000254940 SLIT1O75093 1534 aa17.12■□□□□ 0.33
NIP7-201ENST00000254940 ARHGAP23Q9P227 1491 aa17.12■□□□□ 0.33
NIP7-201ENST00000254940 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.12■□□□□ 0.33
NIP7-201ENST00000254940 KDM5AP29375 1690 aaKnown RBP17.11■□□□□ 0.33
NIP7-201ENST00000254940 SAFB2Q14151 953 aaKnown RBP eCLIP17.1■□□□□ 0.33
NIP7-201ENST00000254940 ROCK2O75116 1388 aaKnown RBP17.1■□□□□ 0.33
NIP7-201ENST00000254940 PIK3C2GO75747 1445 aa17.1■□□□□ 0.33
NIP7-201ENST00000254940 TIMELESSQ9UNS1 1208 aa17.1■□□□□ 0.33
NIP7-201ENST00000254940 NRXN3Q9Y4C0 1643 aa17.1■□□□□ 0.33
NIP7-201ENST00000254940 STRCQ7RTU9 1775 aa17.09■□□□□ 0.33
NIP7-201ENST00000254940 MYOM2P54296 1465 aa17.09■□□□□ 0.33
NIP7-201ENST00000254940 METP08581 1390 aa17.09■□□□□ 0.33
NIP7-201ENST00000254940 HDGFP51858 240 aaKnown RBP17.09■□□□□ 0.33
NIP7-201ENST00000254940 TRAK1Q9UPV9 953 aa17.09■□□□□ 0.33
NIP7-201ENST00000254940 POLR1AO95602 1720 aaPredicted RBP17.09■□□□□ 0.33
NIP7-201ENST00000254940 NEURL4Q96JN8 1562 aa17.09■□□□□ 0.33
NIP7-201ENST00000254940 CARD11Q9BXL7 1154 aa17.09■□□□□ 0.33
NIP7-201ENST00000254940 TRPM1Q7Z4N2 1603 aa17.08■□□□□ 0.32
NIP7-201ENST00000254940 YTHDC1Q96MU7 727 aaKnown RBP17.08■□□□□ 0.32
NIP7-201ENST00000254940 ALKQ9UM73 1620 aa17.07■□□□□ 0.32
NIP7-201ENST00000254940 NPHP4O75161 1426 aaPredicted RBP17.07■□□□□ 0.32
NIP7-201ENST00000254940 C14orf93Q9H972 538 aaKnown RBP17.07■□□□□ 0.32
NIP7-201ENST00000254940 PLEKHG1Q9ULL1 1385 aa17.06■□□□□ 0.32
NIP7-201ENST00000254940 ADAMTS13Q76LX8 1427 aa17.06■□□□□ 0.32
NIP7-201ENST00000254940 NRXN1Q9ULB1 1477 aa17.06■□□□□ 0.32
NIP7-201ENST00000254940 ASXL1Q8IXJ9 1541 aa17.05■□□□□ 0.32
NIP7-201ENST00000254940 DDX10Q13206 875 aaKnown RBP17.02■□□□□ 0.32
NIP7-201ENST00000254940 WAPLQ7Z5K2 1190 aa17.02■□□□□ 0.32
NIP7-201ENST00000254940 RALGAPBQ86X10 1494 aa17.02■□□□□ 0.32
NIP7-201ENST00000254940 SETD1AO15047 1707 aaKnown RBP17.01■□□□□ 0.31
NIP7-201ENST00000254940 PTPRUQ92729 1446 aa17.01■□□□□ 0.31
NIP7-201ENST00000254940 SETBP1Q9Y6X0 1596 aa17■□□□□ 0.31
NIP7-201ENST00000254940 HSPA5P11021 654 aaKnown RBP17■□□□□ 0.31
NIP7-201ENST00000254940 C11orf95C9JLR9 678 aaPredicted RBP17■□□□□ 0.31
NIP7-201ENST00000254940 AMOTL2Q9Y2J4 779 aa17■□□□□ 0.31
NIP7-201ENST00000254940 ZNF335Q9H4Z2 1342 aaPredicted RBP16.99■□□□□ 0.31
NIP7-201ENST00000254940 KCNA6P17658 529 aa16.99■□□□□ 0.31
NIP7-201ENST00000254940 POLR3GLQ9BT43 218 aa16.99■□□□□ 0.31
NIP7-201ENST00000254940 ADGRB1O14514 1584 aa16.99■□□□□ 0.31
NIP7-201ENST00000254940 ST20-MTHFSA0A0A6YYL1 179 aa16.98■□□□□ 0.31
NIP7-201ENST00000254940 USP47Q96K76 1375 aa16.98■□□□□ 0.31
NIP7-201ENST00000254940 PLEKHH1Q9ULM0 1364 aa16.98■□□□□ 0.31
NIP7-201ENST00000254940 YTHDC2Q9H6S0 1430 aaKnown RBP16.97■□□□□ 0.31
NIP7-201ENST00000254940 PRAM1Q96QH2 718 aa16.97■□□□□ 0.31
NIP7-201ENST00000254940 TBX22Q9Y458 520 aa16.97■□□□□ 0.31
NIP7-201ENST00000254940 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
NIP7-201ENST00000254940 MED14O60244 1454 aa16.96■□□□□ 0.31
NIP7-201ENST00000254940 MINK1Q8N4C8 1332 aaPredicted RBP16.95■□□□□ 0.3
NIP7-201ENST00000254940 POGKQ9P215 609 aa16.95■□□□□ 0.3
NIP7-201ENST00000254940 KIAA1210Q9ULL0 1709 aa16.94■□□□□ 0.3
NIP7-201ENST00000254940 STRCP1A6NGW2 1772 aa16.94■□□□□ 0.3
NIP7-201ENST00000254940 ROBO2Q9HCK4 1378 aa16.94■□□□□ 0.3
NIP7-201ENST00000254940 NUTM2FA1L443 756 aa16.94■□□□□ 0.3
NIP7-201ENST00000254940 EIF4G2P78344 907 aaKnown RBP eCLIP16.94■□□□□ 0.3
NIP7-201ENST00000254940 LAMC1P11047 1609 aa16.93■□□□□ 0.3
NIP7-201ENST00000254940 C14orf37Q86TY3 774 aa16.91■□□□□ 0.3
NIP7-201ENST00000254940 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
NIP7-201ENST00000254940 ARHGEF28Q8N1W1 1705 aaKnown RBP16.9■□□□□ 0.3
NIP7-201ENST00000254940 CHD2O14647 1828 aaKnown RBP16.9■□□□□ 0.3
NIP7-201ENST00000254940 LRPPRCP42704 1394 aaKnown RBP16.9■□□□□ 0.3
NIP7-201ENST00000254940 PROSER2Q86WR7 435 aaPredicted RBP16.9■□□□□ 0.3
NIP7-201ENST00000254940 WASHC2AQ641Q2 1341 aa16.89■□□□□ 0.29
NIP7-201ENST00000254940 CENPJQ9HC77 1338 aaPredicted RBP16.88■□□□□ 0.29
NIP7-201ENST00000254940 DIP2AQ14689 1571 aa16.87■□□□□ 0.29
NIP7-201ENST00000254940 QRICH2Q9H0J4 1663 aa16.87■□□□□ 0.29
NIP7-201ENST00000254940 DMRT2Q9Y5R5 561 aa16.86■□□□□ 0.29
NIP7-201ENST00000254940 XRN1Q8IZH2 1706 aaKnown RBP16.85■□□□□ 0.29
NIP7-201ENST00000254940 ABCC11Q96J66 1382 aa16.85■□□□□ 0.29
NIP7-201ENST00000254940 CNGB1Q14028 1251 aaPredicted RBP16.85■□□□□ 0.29
NIP7-201ENST00000254940 TESK2Q96S53 571 aa16.85■□□□□ 0.29
NIP7-201ENST00000254940 DISP3Q9P2K9 1392 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms