RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 SLFN5Q08AF3 891 aa17.5■□□□□ 0.39
H3F3B-201ENST00000254810 TTC37Q6PGP7 1564 aa17.5■□□□□ 0.39
H3F3B-201ENST00000254810 KNSTRNQ9Y448 316 aa17.5■□□□□ 0.39
H3F3B-201ENST00000254810 FRAT2O75474 233 aaPredicted RBP17.49■□□□□ 0.39
H3F3B-201ENST00000254810 BCAR3O75815 825 aa17.49■□□□□ 0.39
H3F3B-201ENST00000254810 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
H3F3B-201ENST00000254810 MAST1Q9Y2H9 1570 aa17.48■□□□□ 0.39
H3F3B-201ENST00000254810 ARHGAP5Q13017 1502 aa17.47■□□□□ 0.39
H3F3B-201ENST00000254810 TRMT2AQ8IZ69 625 aaKnown RBP17.47■□□□□ 0.39
H3F3B-201ENST00000254810 RSPH4AQ5TD94 716 aa17.47■□□□□ 0.39
H3F3B-201ENST00000254810 ATP10AO60312 1499 aa17.46■□□□□ 0.39
H3F3B-201ENST00000254810 IGHDP01880 384 aa17.46■□□□□ 0.39
H3F3B-201ENST00000254810 MADDQ8WXG6 1647 aa17.45■□□□□ 0.38
H3F3B-201ENST00000254810 DAXXQ9UER7 740 aaPredicted RBP17.45■□□□□ 0.38
H3F3B-201ENST00000254810 IQGAP1P46940 1657 aa17.45■□□□□ 0.38
H3F3B-201ENST00000254810 APAF1O14727 1248 aa17.45■□□□□ 0.38
H3F3B-201ENST00000254810 CLASP1Q7Z460 1538 aa17.44■□□□□ 0.38
H3F3B-201ENST00000254810 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.44■□□□□ 0.386e-11■■■□□ 18.3
H3F3B-201ENST00000254810 USP19O94966 1318 aa17.44■□□□□ 0.38
H3F3B-201ENST00000254810 PLXNC1O60486 1568 aa17.43■□□□□ 0.38
H3F3B-201ENST00000254810 MYOM1P52179 1685 aa17.43■□□□□ 0.38
H3F3B-201ENST00000254810 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
H3F3B-201ENST00000254810 ASXL1Q8IXJ9 1541 aa17.42■□□□□ 0.38
H3F3B-201ENST00000254810 SYNMO15061 1565 aa17.42■□□□□ 0.38
H3F3B-201ENST00000254810 SEC24BO95487 1268 aa17.42■□□□□ 0.38
H3F3B-201ENST00000254810 PIK3C2GO75747 1445 aa17.42■□□□□ 0.38
H3F3B-201ENST00000254810 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.41■□□□□ 0.38
H3F3B-201ENST00000254810 EIF3AQ14152 1382 aaKnown RBP17.41■□□□□ 0.38
H3F3B-201ENST00000254810 NKTRP30414 1462 aaKnown RBP17.4■□□□□ 0.38
H3F3B-201ENST00000254810 DUOX2Q9NRD8 1548 aa17.4■□□□□ 0.38
H3F3B-201ENST00000254810 SCAF11Q99590 1463 aaKnown RBP17.37■□□□□ 0.37
H3F3B-201ENST00000254810 ABCC2Q92887 1545 aa17.37■□□□□ 0.37
H3F3B-201ENST00000254810 PANK1Q8TE04 598 aa17.36■□□□□ 0.37
H3F3B-201ENST00000254810 CARD14Q9BXL6 1004 aa17.35■□□□□ 0.37
H3F3B-201ENST00000254810 VIRMAQ69YN4 1812 aaKnown RBP17.34■□□□□ 0.37
H3F3B-201ENST00000254810 SPHKAPQ2M3C7 1700 aa17.34■□□□□ 0.37
H3F3B-201ENST00000254810 COG6Q9Y2V7 657 aa17.34■□□□□ 0.37
H3F3B-201ENST00000254810 E9PSI1 815 aa17.33■□□□□ 0.36
H3F3B-201ENST00000254810 NLRP1Q9C000 1473 aa17.33■□□□□ 0.36
H3F3B-201ENST00000254810 CLTCL1P53675 1640 aa17.32■□□□□ 0.36
H3F3B-201ENST00000254810 NPC1L1Q9UHC9 1359 aa17.32■□□□□ 0.36
H3F3B-201ENST00000254810 TRAPPC8Q9Y2L5 1435 aa17.32■□□□□ 0.36
H3F3B-201ENST00000254810 POGKQ9P215 609 aa17.32■□□□□ 0.36
H3F3B-201ENST00000254810 TNNQ9UQP3 1299 aa17.32■□□□□ 0.36
H3F3B-201ENST00000254810 SCAPERQ9BY12 1400 aa17.31■□□□□ 0.36
H3F3B-201ENST00000254810 CDCA8Q53HL2 280 aa17.31■□□□□ 0.36
H3F3B-201ENST00000254810 TRPM2O94759 1503 aa17.3■□□□□ 0.36
H3F3B-201ENST00000254810 CEP152O94986 1710 aa17.3■□□□□ 0.36
H3F3B-201ENST00000254810 CLUAP1Q96AJ1 413 aa17.3■□□□□ 0.36
H3F3B-201ENST00000254810 WWC1Q8IX03 1113 aa17.29■□□□□ 0.36
H3F3B-201ENST00000254810 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
H3F3B-201ENST00000254810 ERCC6L2Q5T890 1561 aa17.29■□□□□ 0.36
H3F3B-201ENST00000254810 ERVK-7P63135 1459 aa17.29■□□□□ 0.36
H3F3B-201ENST00000254810 CENPJQ9HC77 1338 aaPredicted RBP17.28■□□□□ 0.36
H3F3B-201ENST00000254810 KDM5AP29375 1690 aaKnown RBP17.28■□□□□ 0.36
H3F3B-201ENST00000254810 CFAP70Q5T0N1 1121 aa17.28■□□□□ 0.36
H3F3B-201ENST00000254810 CGNL1Q0VF96 1302 aa17.28■□□□□ 0.36
H3F3B-201ENST00000254810 RRP7AQ9Y3A4 280 aaKnown RBP17.27■□□□□ 0.36
H3F3B-201ENST00000254810 RLBP1P12271 317 aa17.27■□□□□ 0.36
H3F3B-201ENST00000254810 PDE3AQ14432 1141 aa17.27■□□□□ 0.36
H3F3B-201ENST00000254810 PTPRTO14522 1441 aa17.26■□□□□ 0.35
H3F3B-201ENST00000254810 NEUROD2Q15784 382 aa17.26■□□□□ 0.35
H3F3B-201ENST00000254810 PCDHB15Q9Y5E8 787 aa17.26■□□□□ 0.35
H3F3B-201ENST00000254810 CANXP27824 592 aaKnown RBP17.25■□□□□ 0.35
H3F3B-201ENST00000254810 AFAP1Q8N556 730 aa17.25■□□□□ 0.35
H3F3B-201ENST00000254810 PLCH2O75038 1416 aa17.24■□□□□ 0.35
H3F3B-201ENST00000254810 ABCC1P33527 1531 aa17.24■□□□□ 0.35
H3F3B-201ENST00000254810 UGGT1Q9NYU2 1555 aa17.24■□□□□ 0.35
H3F3B-201ENST00000254810 BCL2L13Q9BXK5 485 aa17.24■□□□□ 0.35
H3F3B-201ENST00000254810 ANTXR1Q9H6X2 564 aa17.24■□□□□ 0.35
H3F3B-201ENST00000254810 ADGRF5Q8IZF2 1346 aa17.23■□□□□ 0.35
H3F3B-201ENST00000254810 MAPK8IP3Q9UPT6 1336 aa17.23■□□□□ 0.35
H3F3B-201ENST00000254810 TNNT2P45379 298 aaPredicted RBP17.23■□□□□ 0.35
H3F3B-201ENST00000254810 RARSP54136 660 aaKnown RBP17.22■□□□□ 0.35
H3F3B-201ENST00000254810 SHPRHQ149N8 1683 aa17.22■□□□□ 0.35
H3F3B-201ENST00000254810 ABCA6Q8N139 1617 aa17.21■□□□□ 0.35
H3F3B-201ENST00000254810 EFCAB2Q5VUJ9 269 aa17.21■□□□□ 0.35
H3F3B-201ENST00000254810 POLR3AO14802 1390 aaPredicted RBP17.2■□□□□ 0.34
H3F3B-201ENST00000254810 FAM43AQ8N2R8 423 aa17.2■□□□□ 0.34
H3F3B-201ENST00000254810 PDZRN3Q9UPQ7 1066 aa17.2■□□□□ 0.34
H3F3B-201ENST00000254810 SPAG9O60271 1321 aaKnown RBP17.19■□□□□ 0.34
H3F3B-201ENST00000254810 TBC1D2Q9BYX2 928 aa17.19■□□□□ 0.34
H3F3B-201ENST00000254810 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
H3F3B-201ENST00000254810 ZFYVE16Q7Z3T8 1539 aa17.18■□□□□ 0.34
H3F3B-201ENST00000254810 CHD1O14646 1710 aa17.18■□□□□ 0.34
H3F3B-201ENST00000254810 TBC1D32Q96NH3 1257 aa17.18■□□□□ 0.34
H3F3B-201ENST00000254810 KIAA1210Q9ULL0 1709 aa17.18■□□□□ 0.34
H3F3B-201ENST00000254810 NINLQ9Y2I6 1382 aa17.18■□□□□ 0.34
H3F3B-201ENST00000254810 BECN1Q14457 450 aa17.18■□□□□ 0.34
H3F3B-201ENST00000254810 IQSEC2Q5JU85 1478 aa17.17■□□□□ 0.34
H3F3B-201ENST00000254810 TCP11L2Q8N4U5 519 aa17.17■□□□□ 0.34
H3F3B-201ENST00000254810 SPRYD3Q8NCJ5 442 aa17.17■□□□□ 0.34
H3F3B-201ENST00000254810 RRAGDQ9NQL2 400 aaPredicted RBP17.17■□□□□ 0.34
H3F3B-201ENST00000254810 DEPDC5O75140 1603 aa17.17■□□□□ 0.34
H3F3B-201ENST00000254810 MAP3K4Q9Y6R4 1608 aa17.17■□□□□ 0.34
H3F3B-201ENST00000254810 SHROOM2Q13796 1616 aa17.16■□□□□ 0.34
H3F3B-201ENST00000254810 TET3O43151 1660 aa17.16■□□□□ 0.34
H3F3B-201ENST00000254810 PHF23Q9BUL5 403 aaPredicted RBP17.16■□□□□ 0.34
H3F3B-201ENST00000254810 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
H3F3B-201ENST00000254810 STAC3Q96MF2 364 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms