RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 VSIG10Q8N0Z9 540 aa24.05■■□□□ 1.44
PPFIA1-201ENST00000253925 NCOA1Q15788 1441 aa24.04■■□□□ 1.44
PPFIA1-201ENST00000253925 DZIP1LQ8IYY4 767 aaKnown RBP24.04■■□□□ 1.44
PPFIA1-201ENST00000253925 PLCB2Q00722 1185 aa24.03■■□□□ 1.44
PPFIA1-201ENST00000253925 CHMP4AQ9BY43 222 aa24.03■■□□□ 1.44
PPFIA1-201ENST00000253925 AMER1Q5JTC6 1135 aaPredicted RBP24.03■■□□□ 1.44
PPFIA1-201ENST00000253925 AFAP1Q8N556 730 aa24.02■■□□□ 1.44
PPFIA1-201ENST00000253925 RPRD2Q5VT52 1461 aaKnown RBP24.01■■□□□ 1.43
PPFIA1-201ENST00000253925 DIAPH1O60610 1272 aaKnown RBP24■■□□□ 1.43
PPFIA1-201ENST00000253925 FGD1P98174 961 aa24■■□□□ 1.43
PPFIA1-201ENST00000253925 MINK1Q8N4C8 1332 aaPredicted RBP24■■□□□ 1.43
PPFIA1-201ENST00000253925 KIAA1211Q6ZU35 1233 aa24■■□□□ 1.43
PPFIA1-201ENST00000253925 CFAP70Q5T0N1 1121 aa23.99■■□□□ 1.43
PPFIA1-201ENST00000253925 ARID3AQ99856 593 aa23.99■■□□□ 1.43
PPFIA1-201ENST00000253925 DDX11L8A8MPP1 907 aa23.99■■□□□ 1.43
PPFIA1-201ENST00000253925 HSP90AA2PQ14568 343 aaPredicted RBP23.99■■□□□ 1.43
PPFIA1-201ENST00000253925 ANO8Q9HCE9 1232 aaPredicted RBP23.98■■□□□ 1.43
PPFIA1-201ENST00000253925 ERBINQ96RT1 1412 aa23.98■■□□□ 1.43
PPFIA1-201ENST00000253925 CAMSAP2Q08AD1 1489 aa23.98■■□□□ 1.43
PPFIA1-201ENST00000253925 GOLGA6L4A6NEF3 574 aa23.97■■□□□ 1.43
PPFIA1-201ENST00000253925 ANKRD45Q5TZF3 282 aa23.97■■□□□ 1.43
PPFIA1-201ENST00000253925 RIPK4P57078 832 aa23.96■■□□□ 1.43
PPFIA1-201ENST00000253925 SCAPERQ9BY12 1400 aa23.96■■□□□ 1.43
PPFIA1-201ENST00000253925 ELL2O00472 640 aaPredicted RBP23.95■■□□□ 1.43
PPFIA1-201ENST00000253925 PANK1Q8TE04 598 aa23.95■■□□□ 1.42
PPFIA1-201ENST00000253925 COG3Q96JB2 828 aa23.95■■□□□ 1.42
PPFIA1-201ENST00000253925 BACH2Q9BYV9 841 aa23.94■■□□□ 1.42
PPFIA1-201ENST00000253925 SLC4A10Q6U841 1118 aa23.94■■□□□ 1.42
PPFIA1-201ENST00000253925 KIF16BQ96L93 1317 aa23.93■■□□□ 1.42
PPFIA1-201ENST00000253925 PDE3AQ14432 1141 aa23.93■■□□□ 1.42
PPFIA1-201ENST00000253925 URB2Q14146 1524 aaKnown RBP23.93■■□□□ 1.42
PPFIA1-201ENST00000253925 TCP11L2Q8N4U5 519 aa23.93■■□□□ 1.42
PPFIA1-201ENST00000253925 ST18O60284 1047 aa23.92■■□□□ 1.42
PPFIA1-201ENST00000253925 THOC2Q8NI27 1593 aaKnown RBP23.92■■□□□ 1.42
PPFIA1-201ENST00000253925 MTHFSP49914 203 aa23.92■■□□□ 1.42
PPFIA1-201ENST00000253925 PTPRKQ15262 1439 aa23.92■■□□□ 1.42
PPFIA1-201ENST00000253925 A0A0G2JS52 829 aa23.91■■□□□ 1.42
PPFIA1-201ENST00000253925 SYAP1Q96A49 352 aaPredicted RBP23.91■■□□□ 1.42
PPFIA1-201ENST00000253925 PAK3O75914 559 aaPredicted RBP23.9■■□□□ 1.42
PPFIA1-201ENST00000253925 NFKBIBQ15653 356 aa23.9■■□□□ 1.42
PPFIA1-201ENST00000253925 FOXD4L1Q9NU39 408 aa23.9■■□□□ 1.42
PPFIA1-201ENST00000253925 MAGI1Q96QZ7 1491 aaPredicted RBP23.9■■□□□ 1.42
PPFIA1-201ENST00000253925 CCDC141Q6ZP82 1450 aa23.89■■□□□ 1.41
PPFIA1-201ENST00000253925 TRIM6-TRIM34B2RNG4 842 aa23.89■■□□□ 1.41
PPFIA1-201ENST00000253925 NGDNQ8NEJ9 315 aaKnown RBP23.89■■□□□ 1.41
PPFIA1-201ENST00000253925 HDAC5Q9UQL6 1122 aa23.88■■□□□ 1.41
PPFIA1-201ENST00000253925 API5Q9BZZ5 524 aaKnown RBP23.88■■□□□ 1.41
PPFIA1-201ENST00000253925 AMPHP49418 695 aa23.88■■□□□ 1.41
PPFIA1-201ENST00000253925 TMEM132EQ6IEE7 984 aa23.88■■□□□ 1.41
PPFIA1-201ENST00000253925 CHMP5Q9NZZ3 219 aa23.87■■□□□ 1.41
PPFIA1-201ENST00000253925 EID1Q9Y6B2 187 aa23.87■■□□□ 1.41
PPFIA1-201ENST00000253925 PLB1Q6P1J6 1458 aa23.86■■□□□ 1.41
PPFIA1-201ENST00000253925 SKOR2Q2VWA4 1001 aaPredicted RBP23.86■■□□□ 1.41
PPFIA1-201ENST00000253925 ARHGEF11O15085 1522 aa23.86■■□□□ 1.41
PPFIA1-201ENST00000253925 GGNBP2Q9H3C7 697 aa23.85■■□□□ 1.41
PPFIA1-201ENST00000253925 UGGT2Q9NYU1 1516 aa23.84■■□□□ 1.41
PPFIA1-201ENST00000253925 GOLGA6L6A8MZA4 724 aa23.84■■□□□ 1.41
PPFIA1-201ENST00000253925 GRIN2AQ12879 1464 aa23.83■■□□□ 1.41
PPFIA1-201ENST00000253925 CABP2Q9NPB3 220 aa23.83■■□□□ 1.41
PPFIA1-201ENST00000253925 GNAI1P63096 354 aa23.83■■□□□ 1.4
PPFIA1-201ENST00000253925 NAP1L2Q9ULW6 460 aaPredicted RBP23.83■■□□□ 1.4
PPFIA1-201ENST00000253925 CHAF1AQ13111 956 aaPredicted RBP23.82■■□□□ 1.4
PPFIA1-201ENST00000253925 NINLQ9Y2I6 1382 aa23.82■■□□□ 1.4
PPFIA1-201ENST00000253925 C22orf23Q9BZE7 217 aa23.81■■□□□ 1.4
PPFIA1-201ENST00000253925 NUTM2FA1L443 756 aa23.81■■□□□ 1.4
PPFIA1-201ENST00000253925 BCAR3O75815 825 aa23.81■■□□□ 1.4
PPFIA1-201ENST00000253925 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
PPFIA1-201ENST00000253925 NRDCO43847 1150 aa23.8■■□□□ 1.4
PPFIA1-201ENST00000253925 GPATCH3Q96I76 525 aa23.79■■□□□ 1.4
PPFIA1-201ENST00000253925 SLC12A5Q9H2X9 1139 aa23.79■■□□□ 1.4
PPFIA1-201ENST00000253925 DDX49Q9Y6V7 483 aaKnown RBP23.78■■□□□ 1.4
PPFIA1-201ENST00000253925 KIAA2012Q0VF49 1180 aa23.78■■□□□ 1.4
PPFIA1-201ENST00000253925 LNPKQ9C0E8 428 aa23.78■■□□□ 1.4
PPFIA1-201ENST00000253925 MSH5O43196 834 aa23.77■■□□□ 1.4
PPFIA1-201ENST00000253925 KIF14Q15058 1648 aa23.77■■□□□ 1.4
PPFIA1-201ENST00000253925 WDR63Q8IWG1 891 aa23.76■■□□□ 1.39
PPFIA1-201ENST00000253925 CFAP43Q8NDM7 1665 aa23.76■■□□□ 1.39
PPFIA1-201ENST00000253925 REC8O95072 547 aa23.76■■□□□ 1.39
PPFIA1-201ENST00000253925 SLFN5Q08AF3 891 aa23.75■■□□□ 1.39
PPFIA1-201ENST00000253925 PDZRN3Q9UPQ7 1066 aa23.75■■□□□ 1.39
PPFIA1-201ENST00000253925 CT47B1P0C2W7 299 aaPredicted RBP23.73■■□□□ 1.39
PPFIA1-201ENST00000253925 EXOSC9Q06265 439 aaKnown RBP23.72■■□□□ 1.39
PPFIA1-201ENST00000253925 HTATSF1O43719 755 aaKnown RBP23.72■■□□□ 1.39
PPFIA1-201ENST00000253925 CSPP1Q1MSJ5 1256 aa23.72■■□□□ 1.39
PPFIA1-201ENST00000253925 NOL8Q76FK4 1167 aaKnown RBP23.72■■□□□ 1.39
PPFIA1-201ENST00000253925 DRC7Q8IY82 874 aa23.72■■□□□ 1.39
PPFIA1-201ENST00000253925 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.72■■□□□ 1.39
PPFIA1-201ENST00000253925 LTV1Q96GA3 475 aaPredicted RBP23.71■■□□□ 1.39
PPFIA1-201ENST00000253925 HMOX1P09601 288 aa23.71■■□□□ 1.39
PPFIA1-201ENST00000253925 IL27Q8NEV9 243 aa23.71■■□□□ 1.39
PPFIA1-201ENST00000253925 PHF14O94880 888 aa23.7■■□□□ 1.39
PPFIA1-201ENST00000253925 GPATCH8Q9UKJ3 1502 aaKnown RBP23.7■■□□□ 1.38
PPFIA1-201ENST00000253925 TCOF1Q13428 1488 aaKnown RBP23.7■■□□□ 1.38
PPFIA1-201ENST00000253925 RILPL2Q969X0 211 aa23.69■■□□□ 1.38
PPFIA1-201ENST00000253925 DNAJC5BQ9UF47 199 aa23.68■■□□□ 1.38
PPFIA1-201ENST00000253925 CTTNBP2Q8WZ74 1663 aa23.68■■□□□ 1.38
PPFIA1-201ENST00000253925 RPGRIP1LQ68CZ1 1315 aa23.67■■□□□ 1.38
PPFIA1-201ENST00000253925 INTS3Q68E01 1043 aaKnown RBP23.66■■□□□ 1.38
PPFIA1-201ENST00000253925 TAOK2Q9UL54 1235 aa23.66■■□□□ 1.38
PPFIA1-201ENST00000253925 PKNOX2Q96KN3 472 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms