RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 TESK2Q96S53 571 aa15.43■□□□□ 0.06
USHBP1-201ENST00000252597 PLEKHH1Q9ULM0 1364 aa15.43■□□□□ 0.06
USHBP1-201ENST00000252597 IGHDP01880 384 aa15.43■□□□□ 0.06
USHBP1-201ENST00000252597 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
USHBP1-201ENST00000252597 SHANK2Q9UPX8 1470 aa15.43■□□□□ 0.06
USHBP1-201ENST00000252597 SEC24BO95487 1268 aa15.42■□□□□ 0.06
USHBP1-201ENST00000252597 POGKQ9P215 609 aa15.42■□□□□ 0.06
USHBP1-201ENST00000252597 UPF2Q9HAU5 1272 aaKnown RBP15.42■□□□□ 0.06
USHBP1-201ENST00000252597 C8orf34Q49A92 452 aa15.41■□□□□ 0.06
USHBP1-201ENST00000252597 AFAP1Q8N556 730 aa15.41■□□□□ 0.06
USHBP1-201ENST00000252597 PARD3Q8TEW0 1356 aa15.41■□□□□ 0.06
USHBP1-201ENST00000252597 TNNQ9UQP3 1299 aa15.4■□□□□ 0.06
USHBP1-201ENST00000252597 UHRF1BP1LA0JNW5 1464 aa15.4■□□□□ 0.06
USHBP1-201ENST00000252597 RALGAPBQ86X10 1494 aa15.4■□□□□ 0.06
USHBP1-201ENST00000252597 MYO5CQ9NQX4 1742 aa15.4■□□□□ 0.06
USHBP1-201ENST00000252597 PLCH2O75038 1416 aa15.39■□□□□ 0.05
USHBP1-201ENST00000252597 ARHGEF5Q12774 1597 aa15.39■□□□□ 0.05
USHBP1-201ENST00000252597 ARHGEF12Q9NZN5 1544 aa15.39■□□□□ 0.05
USHBP1-201ENST00000252597 ERBINQ96RT1 1412 aa15.38■□□□□ 0.05
USHBP1-201ENST00000252597 CFAP70Q5T0N1 1121 aa15.38■□□□□ 0.05
USHBP1-201ENST00000252597 CENPJQ9HC77 1338 aaPredicted RBP15.38■□□□□ 0.05
USHBP1-201ENST00000252597 BECN1Q14457 450 aa15.37■□□□□ 0.05
USHBP1-201ENST00000252597 TRAK1Q9UPV9 953 aa15.37■□□□□ 0.05
USHBP1-201ENST00000252597 MFAP1P55081 439 aaKnown RBP15.37■□□□□ 0.05
USHBP1-201ENST00000252597 TRAPPC8Q9Y2L5 1435 aa15.36■□□□□ 0.05
USHBP1-201ENST00000252597 SLFN5Q08AF3 891 aa15.36■□□□□ 0.05
USHBP1-201ENST00000252597 MORC1Q86VD1 984 aa15.36■□□□□ 0.05
USHBP1-201ENST00000252597 KDM5CP41229 1560 aa15.36■□□□□ 0.05
USHBP1-201ENST00000252597 U2SURPO15042 1029 aaKnown RBP15.35■□□□□ 0.05
USHBP1-201ENST00000252597 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
USHBP1-201ENST00000252597 PLEKHH2Q8IVE3 1493 aa15.35■□□□□ 0.05
USHBP1-201ENST00000252597 SPAG9O60271 1321 aaKnown RBP15.35■□□□□ 0.05
USHBP1-201ENST00000252597 WDR7Q9Y4E6 1490 aa15.34■□□□□ 0.05
USHBP1-201ENST00000252597 FTSJ3Q8IY81 847 aaKnown RBP15.34■□□□□ 0.05
USHBP1-201ENST00000252597 CDCA8Q53HL2 280 aa15.34■□□□□ 0.05
USHBP1-201ENST00000252597 KIF3BO15066 747 aa15.33■□□□□ 0.04
USHBP1-201ENST00000252597 ASXL2Q76L83 1435 aa15.33■□□□□ 0.04
USHBP1-201ENST00000252597 U2AF1L5P0DN76 240 aaPredicted RBP15.32■□□□□ 0.04
USHBP1-201ENST00000252597 U2AF1Q01081 240 aaKnown RBP eCLIP15.32■□□□□ 0.04
USHBP1-201ENST00000252597 PRAG1Q86YV5 1406 aa15.32■□□□□ 0.04
USHBP1-201ENST00000252597 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
USHBP1-201ENST00000252597 AMER1Q5JTC6 1135 aaPredicted RBP15.32■□□□□ 0.04
USHBP1-201ENST00000252597 TMEM132EQ6IEE7 984 aa15.31■□□□□ 0.04
USHBP1-201ENST00000252597 E9PSI1 815 aa15.3■□□□□ 0.04
USHBP1-201ENST00000252597 HSP90AA1P07900 732 aaKnown RBP15.3■□□□□ 0.04
USHBP1-201ENST00000252597 NAP1L5Q96NT1 182 aaPredicted RBP15.3■□□□□ 0.04
USHBP1-201ENST00000252597 FAM135AQ9P2D6 1515 aa15.3■□□□□ 0.04
USHBP1-201ENST00000252597 SLC12A5Q9H2X9 1139 aa15.3■□□□□ 0.04
USHBP1-201ENST00000252597 WASHC2CQ9Y4E1 1318 aa15.29■□□□□ 0.04
USHBP1-201ENST00000252597 PLPPR3Q6T4P5 718 aa15.29■□□□□ 0.04
USHBP1-201ENST00000252597 UHRF1BP1Q6BDS2 1440 aa15.29■□□□□ 0.04
USHBP1-201ENST00000252597 FANCAO15360 1455 aa15.28■□□□□ 0.04
USHBP1-201ENST00000252597 TSR2Q969E8 191 aaKnown RBP15.28■□□□□ 0.04
USHBP1-201ENST00000252597 STK26Q9P289 416 aa15.28■□□□□ 0.04
USHBP1-201ENST00000252597 TCP11L2Q8N4U5 519 aa15.27■□□□□ 0.04
USHBP1-201ENST00000252597 PDZRN3Q9UPQ7 1066 aa15.27■□□□□ 0.04
USHBP1-201ENST00000252597 ABCC1P33527 1531 aa15.27■□□□□ 0.04
USHBP1-201ENST00000252597 ITPRIPQ8IWB1 547 aa15.27■□□□□ 0.03
USHBP1-201ENST00000252597 RLBP1P12271 317 aa15.26■□□□□ 0.03
USHBP1-201ENST00000252597 PCDHB15Q9Y5E8 787 aa15.26■□□□□ 0.03
USHBP1-201ENST00000252597 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
USHBP1-201ENST00000252597 WWC1Q8IX03 1113 aa15.25■□□□□ 0.03
USHBP1-201ENST00000252597 GGT6Q6P531 493 aa15.25■□□□□ 0.03
USHBP1-201ENST00000252597 KDM5DQ9BY66 1539 aa15.24■□□□□ 0.03
USHBP1-201ENST00000252597 A2MP01023 1474 aa15.24■□□□□ 0.03
USHBP1-201ENST00000252597 MTHFSP49914 203 aa15.24■□□□□ 0.03
USHBP1-201ENST00000252597 SMC4Q9NTJ3 1288 aa15.24■□□□□ 0.03
USHBP1-201ENST00000252597 MAST1Q9Y2H9 1570 aa15.24■□□□□ 0.03
USHBP1-201ENST00000252597 CGNL1Q0VF96 1302 aa15.24■□□□□ 0.03
USHBP1-201ENST00000252597 DUOX2Q9NRD8 1548 aa15.23■□□□□ 0.03
USHBP1-201ENST00000252597 ADGRL1O94910 1474 aa15.23■□□□□ 0.03
USHBP1-201ENST00000252597 ELL2O00472 640 aaPredicted RBP15.23■□□□□ 0.03
USHBP1-201ENST00000252597 CARD14Q9BXL6 1004 aa15.23■□□□□ 0.03
USHBP1-201ENST00000252597 FAM69CQ0P6D2 419 aa15.22■□□□□ 0.03
USHBP1-201ENST00000252597 TRHP20396 242 aaPredicted RBP15.21■□□□□ 0.03
USHBP1-201ENST00000252597 PANK2Q9BZ23 570 aa15.21■□□□□ 0.03
USHBP1-201ENST00000252597 MAGI2Q86UL8 1455 aa15.21■□□□□ 0.03
USHBP1-201ENST00000252597 PLXNC1O60486 1568 aa15.21■□□□□ 0.03
USHBP1-201ENST00000252597 TBC1D2Q9BYX2 928 aa15.2■□□□□ 0.02
USHBP1-201ENST00000252597 RWDD1Q9H446 243 aaPredicted RBP15.2■□□□□ 0.02
USHBP1-201ENST00000252597 ADGRF5Q8IZF2 1346 aa15.2■□□□□ 0.02
USHBP1-201ENST00000252597 CFAP53Q96M91 514 aa15.2■□□□□ 0.02
USHBP1-201ENST00000252597 COL17A1Q9UMD9 1497 aaPredicted RBP15.19■□□□□ 0.02
USHBP1-201ENST00000252597 TPRNQ4KMQ1 711 aa15.19■□□□□ 0.02
USHBP1-201ENST00000252597 MAPK8IP3Q9UPT6 1336 aa15.19■□□□□ 0.02
USHBP1-201ENST00000252597 GOLGA6L3A6NEY3 463 aa15.19■□□□□ 0.02
USHBP1-201ENST00000252597 BLMP54132 1417 aaPredicted RBP15.19■□□□□ 0.02
USHBP1-201ENST00000252597 APBB1O00213 710 aa15.19■□□□□ 0.02
USHBP1-201ENST00000252597 PMFBP1Q8TBY8 1022 aa15.19■□□□□ 0.02
USHBP1-201ENST00000252597 LNPKQ9C0E8 428 aa15.19■□□□□ 0.02
USHBP1-201ENST00000252597 CD109Q6YHK3 1445 aa15.18■□□□□ 0.02
USHBP1-201ENST00000252597 PLA2R1Q13018 1463 aa15.18■□□□□ 0.02
USHBP1-201ENST00000252597 RARSP54136 660 aaKnown RBP15.18■□□□□ 0.02
USHBP1-201ENST00000252597 ABCA9Q8IUA7 1624 aa15.18■□□□□ 0.02
USHBP1-201ENST00000252597 ZBTB7CA1YPR0 619 aa15.17■□□□□ 0.02
USHBP1-201ENST00000252597 UNC13BO14795 1591 aa15.17■□□□□ 0.02
USHBP1-201ENST00000252597 NCLP19338 710 aaKnown RBP15.17■□□□□ 0.02
USHBP1-201ENST00000252597 SRPK2P78362 688 aaKnown RBP15.17■□□□□ 0.02
USHBP1-201ENST00000252597 ZFYVE16Q7Z3T8 1539 aa15.16■□□□□ 0.02
USHBP1-201ENST00000252597 GGNBP2Q9H3C7 697 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms