RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 ZMYM3Q14202 1370 aa32.6■■■□□ 2.81
SYNGR3-201ENST00000248121 TMEM131LA2VDJ0 1609 aa32.6■■■□□ 2.81
SYNGR3-201ENST00000248121 MYOM2P54296 1465 aa32.6■■■□□ 2.81
SYNGR3-201ENST00000248121 KIF7Q2M1P5 1343 aa32.59■■■□□ 2.81
SYNGR3-201ENST00000248121 ADGRF5Q8IZF2 1346 aa32.58■■■□□ 2.81
SYNGR3-201ENST00000248121 FER1L4A9Z1Z3 1794 aa32.58■■■□□ 2.81
SYNGR3-201ENST00000248121 NEXMIFQ5QGS0 1516 aa32.55■■■□□ 2.8
SYNGR3-201ENST00000248121 ESF1Q9H501 851 aaKnown RBP32.55■■■□□ 2.8
SYNGR3-201ENST00000248121 LAMC1P11047 1609 aa32.55■■■□□ 2.8
SYNGR3-201ENST00000248121 GPRASP1Q5JY77 1395 aa32.55■■■□□ 2.8
SYNGR3-201ENST00000248121 SLC52A1Q9NWF4 448 aa32.54■■■□□ 2.8
SYNGR3-201ENST00000248121 NRXN1Q9ULB1 1477 aa32.53■■■□□ 2.8
SYNGR3-201ENST00000248121 CCER2I3L3R5 266 aa32.52■■■□□ 2.8
SYNGR3-201ENST00000248121 C3P01024 1663 aa32.5■■■□□ 2.79
SYNGR3-201ENST00000248121 NUTM2DQ5VT03 806 aaPredicted RBP32.49■■■□□ 2.79
SYNGR3-201ENST00000248121 KIAA1210Q9ULL0 1709 aa32.49■■■□□ 2.79
SYNGR3-201ENST00000248121 IQGAP1P46940 1657 aa32.46■■■□□ 2.79
SYNGR3-201ENST00000248121 STAC3Q96MF2 364 aa32.45■■■□□ 2.79
SYNGR3-201ENST00000248121 CEBPAP49715 358 aaPredicted RBP32.44■■■□□ 2.78
SYNGR3-201ENST00000248121 ST20-MTHFSA0A0A6YYL1 179 aa32.44■■■□□ 2.78
SYNGR3-201ENST00000248121 CFAP70Q5T0N1 1121 aa32.44■■■□□ 2.78
SYNGR3-201ENST00000248121 PIK3C2GO75747 1445 aa32.43■■■□□ 2.78
SYNGR3-201ENST00000248121 RPGRIP1LQ68CZ1 1315 aa32.4■■■□□ 2.78
SYNGR3-201ENST00000248121 A2ML1A8K2U0 1454 aa32.39■■■□□ 2.78
SYNGR3-201ENST00000248121 TNRQ92752 1358 aa32.38■■■□□ 2.77
SYNGR3-201ENST00000248121 PLPPR3Q6T4P5 718 aa32.38■■■□□ 2.77
SYNGR3-201ENST00000248121 RIMS1Q86UR5 1692 aaKnown RBP32.37■■■□□ 2.77
SYNGR3-201ENST00000248121 SENP3Q9H4L4 574 aaPredicted RBP32.36■■■□□ 2.77
SYNGR3-201ENST00000248121 STAG3Q9UJ98 1225 aa32.33■■■□□ 2.77
SYNGR3-201ENST00000248121 GTF3C3Q9Y5Q9 886 aa32.33■■■□□ 2.77
SYNGR3-201ENST00000248121 UBR1Q8IWV7 1749 aa32.32■■■□□ 2.76
SYNGR3-201ENST00000248121 ADAMTSL3P82987 1691 aa32.31■■■□□ 2.76
SYNGR3-201ENST00000248121 SCAF11Q99590 1463 aaKnown RBP32.3■■■□□ 2.76
SYNGR3-201ENST00000248121 ADGRB1O14514 1584 aa32.3■■■□□ 2.76
SYNGR3-201ENST00000248121 SETBP1Q9Y6X0 1596 aa32.29■■■□□ 2.76
SYNGR3-201ENST00000248121 ZFYVE9O95405 1425 aa32.28■■■□□ 2.76
SYNGR3-201ENST00000248121 VGFO15240 615 aaPredicted RBP32.27■■■□□ 2.76
SYNGR3-201ENST00000248121 PRKRIP1Q9H875 184 aaPredicted RBP32.27■■■□□ 2.76
SYNGR3-201ENST00000248121 POLR3GLQ9BT43 218 aa32.27■■■□□ 2.76
SYNGR3-201ENST00000248121 C14orf93Q9H972 538 aaKnown RBP32.27■■■□□ 2.76
SYNGR3-201ENST00000248121 TESK2Q96S53 571 aa32.26■■■□□ 2.75
SYNGR3-201ENST00000248121 ASXL1Q8IXJ9 1541 aa32.24■■■□□ 2.75
SYNGR3-201ENST00000248121 RIMS2Q9UQ26 1411 aa32.24■■■□□ 2.75
SYNGR3-201ENST00000248121 KDM5AP29375 1690 aaKnown RBP32.24■■■□□ 2.75
SYNGR3-201ENST00000248121 TMEM132EQ6IEE7 984 aa32.23■■■□□ 2.75
SYNGR3-201ENST00000248121 DISP3Q9P2K9 1392 aa32.21■■■□□ 2.75
SYNGR3-201ENST00000248121 MYO3AQ8NEV4 1616 aa32.2■■■□□ 2.75
SYNGR3-201ENST00000248121 NLRP1Q9C000 1473 aa32.18■■■□□ 2.74
SYNGR3-201ENST00000248121 NRXN3Q9Y4C0 1643 aa32.16■■■□□ 2.74
SYNGR3-201ENST00000248121 SETD1AO15047 1707 aaKnown RBP32.16■■■□□ 2.74
SYNGR3-201ENST00000248121 CCDC184Q52MB2 194 aa32.15■■■□□ 2.74
SYNGR3-201ENST00000248121 ALKQ9UM73 1620 aa32.15■■■□□ 2.74
SYNGR3-201ENST00000248121 ARHGEF28Q8N1W1 1705 aaKnown RBP32.14■■■□□ 2.74
SYNGR3-201ENST00000248121 TRAK1Q9UPV9 953 aa32.12■■■□□ 2.73
SYNGR3-201ENST00000248121 PTPRMP28827 1452 aa32.12■■■□□ 2.73
SYNGR3-201ENST00000248121 EIF3AQ14152 1382 aaKnown RBP32.11■■■□□ 2.73
SYNGR3-201ENST00000248121 TMEM2Q9UHN6 1383 aa32.1■■■□□ 2.73
SYNGR3-201ENST00000248121 QRICH2Q9H0J4 1663 aa32.1■■■□□ 2.73
SYNGR3-201ENST00000248121 CEP170BQ9Y4F5 1589 aaPredicted RBP32.03■■■□□ 2.72
SYNGR3-201ENST00000248121 TMF1P82094 1093 aa32.03■■■□□ 2.72
SYNGR3-201ENST00000248121 LTKP29376 864 aa32.01■■■□□ 2.71
SYNGR3-201ENST00000248121 STK26Q9P289 416 aa32■■■□□ 2.71
SYNGR3-201ENST00000248121 CENPJQ9HC77 1338 aaPredicted RBP31.99■■■□□ 2.71
SYNGR3-201ENST00000248121 SLIT1O75093 1534 aa31.99■■■□□ 2.71
SYNGR3-201ENST00000248121 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.99■■■□□ 2.71
SYNGR3-201ENST00000248121 MYOM1P52179 1685 aa31.99■■■□□ 2.71
SYNGR3-201ENST00000248121 YTHDC2Q9H6S0 1430 aaKnown RBP31.99■■■□□ 2.71
SYNGR3-201ENST00000248121 ARHGAP23Q9P227 1491 aa31.98■■■□□ 2.71
SYNGR3-201ENST00000248121 MRS2Q9HD23 443 aa31.98■■■□□ 2.71
SYNGR3-201ENST00000248121 ZNF142P52746 1687 aaPredicted RBP31.96■■■□□ 2.71
SYNGR3-201ENST00000248121 CNGB1Q14028 1251 aaPredicted RBP31.96■■■□□ 2.71
SYNGR3-201ENST00000248121 METP08581 1390 aa31.94■■■□□ 2.7
SYNGR3-201ENST00000248121 SBNO2Q9Y2G9 1366 aa31.92■■■□□ 2.7
SYNGR3-201ENST00000248121 PER1O15534 1290 aaPredicted RBP31.92■■■□□ 2.7
SYNGR3-201ENST00000248121 ADAMTS13Q76LX8 1427 aa31.91■■■□□ 2.7
SYNGR3-201ENST00000248121 SAFB2Q14151 953 aaKnown RBP eCLIP31.9■■■□□ 2.7
SYNGR3-201ENST00000248121 TXNDC2Q86VQ3 553 aa31.9■■■□□ 2.7
SYNGR3-201ENST00000248121 SETD1BQ9UPS6 1966 aaKnown RBP31.89■■■□□ 2.7
SYNGR3-201ENST00000248121 PLEKHG1Q9ULL1 1385 aa31.88■■■□□ 2.69
SYNGR3-201ENST00000248121 TULP4Q9NRJ4 1543 aa31.88■■■□□ 2.69
SYNGR3-201ENST00000248121 HDGFP51858 240 aaKnown RBP31.88■■■□□ 2.69
SYNGR3-201ENST00000248121 HNRNPUQ00839 825 aaKnown RBP eCLIP31.87■■■□□ 2.69
SYNGR3-201ENST00000248121 BCANQ96GW7 911 aa31.87■■■□□ 2.69
SYNGR3-201ENST00000248121 THEMISQ8N1K5 641 aaPredicted RBP31.86■■■□□ 2.69
SYNGR3-201ENST00000248121 FAM9BQ8IZU0 186 aa31.85■■■□□ 2.69
SYNGR3-201ENST00000248121 PANK3Q9H999 370 aa31.84■■■□□ 2.69
SYNGR3-201ENST00000248121 KTN1Q86UP2 1357 aaKnown RBP31.84■■■□□ 2.69
SYNGR3-201ENST00000248121 PRAM1Q96QH2 718 aa31.84■■■□□ 2.69
SYNGR3-201ENST00000248121 LRPPRCP42704 1394 aaKnown RBP31.83■■■□□ 2.69
SYNGR3-201ENST00000248121 KNDC1Q76NI1 1749 aa31.82■■■□□ 2.68
SYNGR3-201ENST00000248121 EID1Q9Y6B2 187 aa31.82■■■□□ 2.68
SYNGR3-201ENST00000248121 PLEKHH1Q9ULM0 1364 aa31.82■■■□□ 2.68
SYNGR3-201ENST00000248121 RALBP1Q15311 655 aa31.81■■■□□ 2.68
SYNGR3-201ENST00000248121 MED14O60244 1454 aa31.81■■■□□ 2.68
SYNGR3-201ENST00000248121 DLC1Q96QB1 1528 aa31.81■■■□□ 2.68
SYNGR3-201ENST00000248121 PARD3Q8TEW0 1356 aa31.8■■■□□ 2.68
SYNGR3-201ENST00000248121 SLC26A8Q96RN1 970 aa31.79■■■□□ 2.68
SYNGR3-201ENST00000248121 CDCA8Q53HL2 280 aa31.78■■■□□ 2.68
SYNGR3-201ENST00000248121 WAPLQ7Z5K2 1190 aa31.77■■■□□ 2.68
SYNGR3-201ENST00000248121 MYBBP1AQ9BQG0 1328 aaKnown RBP31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms