RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 PPLO60437 1756 aa25.03■■□□□ 1.6
KLHDC3-201ENST00000244670 ERVK-7P63135 1459 aa25.03■■□□□ 1.6
KLHDC3-201ENST00000244670 IDI1Q13907 227 aa25.03■■□□□ 1.6
KLHDC3-201ENST00000244670 SCAF1Q9H7N4 1312 aaKnown RBP25.02■■□□□ 1.6
KLHDC3-201ENST00000244670 ESF1Q9H501 851 aaKnown RBP25■■□□□ 1.59
KLHDC3-201ENST00000244670 MYO5BQ9ULV0 1848 aa25■■□□□ 1.59
KLHDC3-201ENST00000244670 SLC52A1Q9NWF4 448 aa25■■□□□ 1.59
KLHDC3-201ENST00000244670 POLR3GLQ9BT43 218 aa24.99■■□□□ 1.59
KLHDC3-201ENST00000244670 KIAA1210Q9ULL0 1709 aa24.98■■□□□ 1.59
KLHDC3-201ENST00000244670 NRXN1Q9ULB1 1477 aa24.96■■□□□ 1.59
KLHDC3-201ENST00000244670 CFAP70Q5T0N1 1121 aa24.96■■□□□ 1.59
KLHDC3-201ENST00000244670 IQGAP1P46940 1657 aa24.95■■□□□ 1.58
KLHDC3-201ENST00000244670 NUTM2DQ5VT03 806 aaPredicted RBP24.95■■□□□ 1.58
KLHDC3-201ENST00000244670 SPATA31D1Q6ZQQ2 1576 aa24.95■■□□□ 1.58
KLHDC3-201ENST00000244670 TMEM131LA2VDJ0 1609 aa24.94■■□□□ 1.58
KLHDC3-201ENST00000244670 RPGRIP1LQ68CZ1 1315 aa24.94■■□□□ 1.58
KLHDC3-201ENST00000244670 NEXMIFQ5QGS0 1516 aa24.94■■□□□ 1.58
KLHDC3-201ENST00000244670 ZMYM3Q14202 1370 aa24.94■■□□□ 1.58
KLHDC3-201ENST00000244670 ANP32CO43423 234 aa24.93■■□□□ 1.58
KLHDC3-201ENST00000244670 PIK3C2GO75747 1445 aa24.9■■□□□ 1.58
KLHDC3-201ENST00000244670 SCAF11Q99590 1463 aaKnown RBP24.89■■□□□ 1.58
KLHDC3-201ENST00000244670 STAG3Q9UJ98 1225 aa24.87■■□□□ 1.57
KLHDC3-201ENST00000244670 TESK2Q96S53 571 aa24.86■■□□□ 1.57
KLHDC3-201ENST00000244670 VGFO15240 615 aaPredicted RBP24.84■■□□□ 1.57
KLHDC3-201ENST00000244670 SENP3Q9H4L4 574 aaPredicted RBP24.84■■□□□ 1.57
KLHDC3-201ENST00000244670 DISP3Q9P2K9 1392 aa24.83■■□□□ 1.57
KLHDC3-201ENST00000244670 C14orf93Q9H972 538 aaKnown RBP24.82■■□□□ 1.56
KLHDC3-201ENST00000244670 CCER2I3L3R5 266 aa24.81■■□□□ 1.56
KLHDC3-201ENST00000244670 FER1L4A9Z1Z3 1794 aa24.81■■□□□ 1.56
KLHDC3-201ENST00000244670 SETBP1Q9Y6X0 1596 aa24.81■■□□□ 1.56
KLHDC3-201ENST00000244670 EIF3AQ14152 1382 aaKnown RBP24.8■■□□□ 1.56
KLHDC3-201ENST00000244670 A2ML1A8K2U0 1454 aa24.8■■□□□ 1.56
KLHDC3-201ENST00000244670 TMEM132EQ6IEE7 984 aa24.78■■□□□ 1.56
KLHDC3-201ENST00000244670 ADGRB1O14514 1584 aa24.78■■□□□ 1.56
KLHDC3-201ENST00000244670 TNRQ92752 1358 aa24.78■■□□□ 1.56
KLHDC3-201ENST00000244670 CEBPAP49715 358 aaPredicted RBP24.78■■□□□ 1.56
KLHDC3-201ENST00000244670 TMF1P82094 1093 aa24.78■■□□□ 1.56
KLHDC3-201ENST00000244670 ZFYVE9O95405 1425 aa24.78■■□□□ 1.56
KLHDC3-201ENST00000244670 PLPPR3Q6T4P5 718 aa24.77■■□□□ 1.56
KLHDC3-201ENST00000244670 C3P01024 1663 aa24.75■■□□□ 1.55
KLHDC3-201ENST00000244670 TRAK1Q9UPV9 953 aa24.73■■□□□ 1.55
KLHDC3-201ENST00000244670 GTF3C3Q9Y5Q9 886 aa24.73■■□□□ 1.55
KLHDC3-201ENST00000244670 RIMS2Q9UQ26 1411 aa24.72■■□□□ 1.55
KLHDC3-201ENST00000244670 CNGB1Q14028 1251 aaPredicted RBP24.71■■□□□ 1.55
KLHDC3-201ENST00000244670 MYO3AQ8NEV4 1616 aa24.71■■□□□ 1.55
KLHDC3-201ENST00000244670 PRKRIP1Q9H875 184 aaPredicted RBP24.7■■□□□ 1.54
KLHDC3-201ENST00000244670 ASXL1Q8IXJ9 1541 aa24.68■■□□□ 1.54
KLHDC3-201ENST00000244670 UBR1Q8IWV7 1749 aa24.68■■□□□ 1.54
KLHDC3-201ENST00000244670 CENPJQ9HC77 1338 aaPredicted RBP24.67■■□□□ 1.54
KLHDC3-201ENST00000244670 QRICH2Q9H0J4 1663 aa24.65■■□□□ 1.54
KLHDC3-201ENST00000244670 ARHGEF28Q8N1W1 1705 aaKnown RBP24.65■■□□□ 1.54
KLHDC3-201ENST00000244670 ALKQ9UM73 1620 aa24.65■■□□□ 1.54
KLHDC3-201ENST00000244670 KDM5AP29375 1690 aaKnown RBP24.63■■□□□ 1.53
KLHDC3-201ENST00000244670 RIMS1Q86UR5 1692 aaKnown RBP24.63■■□□□ 1.53
KLHDC3-201ENST00000244670 STK26Q9P289 416 aa24.62■■□□□ 1.53
KLHDC3-201ENST00000244670 NLRP1Q9C000 1473 aa24.61■■□□□ 1.53
KLHDC3-201ENST00000244670 CDCA8Q53HL2 280 aa24.61■■□□□ 1.53
KLHDC3-201ENST00000244670 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.59■■□□□ 1.53
KLHDC3-201ENST00000244670 PANK3Q9H999 370 aa24.59■■□□□ 1.53
KLHDC3-201ENST00000244670 SBNO2Q9Y2G9 1366 aa24.59■■□□□ 1.53
KLHDC3-201ENST00000244670 MYOM1P52179 1685 aa24.58■■□□□ 1.53
KLHDC3-201ENST00000244670 TMEM2Q9UHN6 1383 aa24.58■■□□□ 1.53
KLHDC3-201ENST00000244670 PTPRMP28827 1452 aa24.58■■□□□ 1.53
KLHDC3-201ENST00000244670 NRXN3Q9Y4C0 1643 aa24.58■■□□□ 1.52
KLHDC3-201ENST00000244670 CCDC184Q52MB2 194 aa24.57■■□□□ 1.52
KLHDC3-201ENST00000244670 SETD1AO15047 1707 aaKnown RBP24.57■■□□□ 1.52
KLHDC3-201ENST00000244670 YTHDC2Q9H6S0 1430 aaKnown RBP24.57■■□□□ 1.52
KLHDC3-201ENST00000244670 SLC24A1O60721 1099 aa24.55■■□□□ 1.52
KLHDC3-201ENST00000244670 SAFB2Q14151 953 aaKnown RBP eCLIP24.55■■□□□ 1.52
KLHDC3-201ENST00000244670 ADAMTSL3P82987 1691 aa24.54■■□□□ 1.52
KLHDC3-201ENST00000244670 PER1O15534 1290 aaPredicted RBP24.54■■□□□ 1.52
KLHDC3-201ENST00000244670 HDGFP51858 240 aaKnown RBP24.53■■□□□ 1.52
KLHDC3-201ENST00000244670 BCANQ96GW7 911 aa24.52■■□□□ 1.52
KLHDC3-201ENST00000244670 MRS2Q9HD23 443 aa24.5■■□□□ 1.51
KLHDC3-201ENST00000244670 LTKP29376 864 aa24.49■■□□□ 1.51
KLHDC3-201ENST00000244670 PRAM1Q96QH2 718 aa24.49■■□□□ 1.51
KLHDC3-201ENST00000244670 TULP4Q9NRJ4 1543 aa24.48■■□□□ 1.51
KLHDC3-201ENST00000244670 POGKQ9P215 609 aa24.47■■□□□ 1.51
KLHDC3-201ENST00000244670 KTN1Q86UP2 1357 aaKnown RBP24.47■■□□□ 1.51
KLHDC3-201ENST00000244670 METP08581 1390 aa24.46■■□□□ 1.51
KLHDC3-201ENST00000244670 CC2D1BQ5T0F9 858 aaKnown RBP24.46■■□□□ 1.51
KLHDC3-201ENST00000244670 TXNDC2Q86VQ3 553 aa24.46■■□□□ 1.51
KLHDC3-201ENST00000244670 LRPPRCP42704 1394 aaKnown RBP24.44■■□□□ 1.5
KLHDC3-201ENST00000244670 EVC2Q86UK5 1308 aa24.44■■□□□ 1.5
KLHDC3-201ENST00000244670 SLIT1O75093 1534 aa24.44■■□□□ 1.5
KLHDC3-201ENST00000244670 MINK1Q8N4C8 1332 aaPredicted RBP24.44■■□□□ 1.5
KLHDC3-201ENST00000244670 RALBP1Q15311 655 aa24.43■■□□□ 1.5
KLHDC3-201ENST00000244670 CEP170BQ9Y4F5 1589 aaPredicted RBP24.43■■□□□ 1.5
KLHDC3-201ENST00000244670 ARHGAP23Q9P227 1491 aa24.43■■□□□ 1.5
KLHDC3-201ENST00000244670 KNSTRNQ9Y448 316 aa24.43■■□□□ 1.5
KLHDC3-201ENST00000244670 EID1Q9Y6B2 187 aa24.43■■□□□ 1.5
KLHDC3-201ENST00000244670 THEMISQ8N1K5 641 aaPredicted RBP24.42■■□□□ 1.5
KLHDC3-201ENST00000244670 PARD3Q8TEW0 1356 aa24.42■■□□□ 1.5
KLHDC3-201ENST00000244670 PLEKHG1Q9ULL1 1385 aa24.42■■□□□ 1.5
KLHDC3-201ENST00000244670 ADAMTS13Q76LX8 1427 aa24.42■■□□□ 1.5
KLHDC3-201ENST00000244670 TMC1Q8TDI8 760 aa24.41■■□□□ 1.5
KLHDC3-201ENST00000244670 DLC1Q96QB1 1528 aa24.41■■□□□ 1.5
KLHDC3-201ENST00000244670 FAM9BQ8IZU0 186 aa24.41■■□□□ 1.5
KLHDC3-201ENST00000244670 MYBBP1AQ9BQG0 1328 aaKnown RBP24.4■■□□□ 1.5
KLHDC3-201ENST00000244670 WAPLQ7Z5K2 1190 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms