RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 IRX6P78412 446 aaPredicted RBP21.81■■□□□ 1.08
UBE3D-201ENST00000237186 KIAA1210Q9ULL0 1709 aa21.81■■□□□ 1.08
UBE3D-201ENST00000237186 SLC24A1O60721 1099 aa21.81■■□□□ 1.08
UBE3D-201ENST00000237186 FAM69CQ0P6D2 419 aa21.79■■□□□ 1.08
UBE3D-201ENST00000237186 ZMYM4Q5VZL5 1548 aa21.79■■□□□ 1.08
UBE3D-201ENST00000237186 DIP2BQ9P265 1576 aa21.78■■□□□ 1.08
UBE3D-201ENST00000237186 EIF3AQ14152 1382 aaKnown RBP21.78■■□□□ 1.08
UBE3D-201ENST00000237186 HECW2Q9P2P5 1572 aa21.78■■□□□ 1.08
UBE3D-201ENST00000237186 NRXN1Q9ULB1 1477 aa21.77■■□□□ 1.08
UBE3D-201ENST00000237186 FRMPD1Q5SYB0 1578 aa21.77■■□□□ 1.07
UBE3D-201ENST00000237186 PPRC1Q5VV67 1664 aaKnown RBP21.77■■□□□ 1.07
UBE3D-201ENST00000237186 RAPGEF3O95398 923 aa21.76■■□□□ 1.07
UBE3D-201ENST00000237186 UGGT1Q9NYU2 1555 aa21.74■■□□□ 1.07
UBE3D-201ENST00000237186 CC2D1BQ5T0F9 858 aaKnown RBP21.73■■□□□ 1.07
UBE3D-201ENST00000237186 ADGRF5Q8IZF2 1346 aa21.72■■□□□ 1.07
UBE3D-201ENST00000237186 NPATQ14207 1427 aa21.72■■□□□ 1.07
UBE3D-201ENST00000237186 PDE3BQ13370 1112 aa21.71■■□□□ 1.07
UBE3D-201ENST00000237186 CFAP70Q5T0N1 1121 aa21.71■■□□□ 1.07
UBE3D-201ENST00000237186 SYNMO15061 1565 aa21.71■■□□□ 1.07
UBE3D-201ENST00000237186 NPC1L1Q9UHC9 1359 aa21.71■■□□□ 1.07
UBE3D-201ENST00000237186 ADGRB3O60242 1522 aa21.71■■□□□ 1.07
UBE3D-201ENST00000237186 KNSTRNQ9Y448 316 aa21.71■■□□□ 1.07
UBE3D-201ENST00000237186 ABCA6Q8N139 1617 aa21.7■■□□□ 1.06
UBE3D-201ENST00000237186 AMER1Q5JTC6 1135 aaPredicted RBP21.7■■□□□ 1.06
UBE3D-201ENST00000237186 RICTORQ6R327 1708 aa21.69■■□□□ 1.06
UBE3D-201ENST00000237186 KIF1BO60333 1816 aa21.69■■□□□ 1.06
UBE3D-201ENST00000237186 BLMP54132 1417 aaPredicted RBP21.68■■□□□ 1.06
UBE3D-201ENST00000237186 IFT172Q9UG01 1749 aa21.68■■□□□ 1.06
UBE3D-201ENST00000237186 SBNO2Q9Y2G9 1366 aa21.67■■□□□ 1.06
UBE3D-201ENST00000237186 RPGRIP1LQ68CZ1 1315 aa21.67■■□□□ 1.06
UBE3D-201ENST00000237186 GGT6Q6P531 493 aa21.66■■□□□ 1.06
UBE3D-201ENST00000237186 RBM19Q9Y4C8 960 aaKnown RBP21.66■■□□□ 1.06
UBE3D-201ENST00000237186 ABCC3O15438 1527 aa21.66■■□□□ 1.06
UBE3D-201ENST00000237186 NOS1P29475 1434 aa21.64■■□□□ 1.05
UBE3D-201ENST00000237186 DIP2CQ9Y2E4 1556 aa21.64■■□□□ 1.05
UBE3D-201ENST00000237186 SETBP1Q9Y6X0 1596 aa21.64■■□□□ 1.05
UBE3D-201ENST00000237186 ASXL1Q8IXJ9 1541 aa21.63■■□□□ 1.05
UBE3D-201ENST00000237186 TSPOAP1O95153 1857 aa21.63■■□□□ 1.05
UBE3D-201ENST00000237186 C14orf93Q9H972 538 aaKnown RBP21.62■■□□□ 1.05
UBE3D-201ENST00000237186 MROH2AA6NES4 1674 aa21.62■■□□□ 1.05
UBE3D-201ENST00000237186 ERVK-7P63135 1459 aa21.62■■□□□ 1.05
UBE3D-201ENST00000237186 PPP2R1AP30153 589 aa21.62■■□□□ 1.05
UBE3D-201ENST00000237186 PIK3C2GO75747 1445 aa21.61■■□□□ 1.05
UBE3D-201ENST00000237186 ARHGAP31Q2M1Z3 1444 aa21.61■■□□□ 1.05
UBE3D-201ENST00000237186 YEATS2Q9ULM3 1422 aa21.6■■□□□ 1.05
UBE3D-201ENST00000237186 MYO3AQ8NEV4 1616 aa21.6■■□□□ 1.05
UBE3D-201ENST00000237186 B4GALNT3Q6L9W6 998 aa21.59■■□□□ 1.05
UBE3D-201ENST00000237186 MYOM1P52179 1685 aa21.58■■□□□ 1.05
UBE3D-201ENST00000237186 SENP3-EIF4A1A0A087X0R7 540 aa21.57■■□□□ 1.04
UBE3D-201ENST00000237186 KDM5AP29375 1690 aaKnown RBP21.57■■□□□ 1.04
UBE3D-201ENST00000237186 CENPJQ9HC77 1338 aaPredicted RBP21.55■■□□□ 1.04
UBE3D-201ENST00000237186 KIF13AQ9H1H9 1805 aa21.55■■□□□ 1.04
UBE3D-201ENST00000237186 CHGAP10645 457 aaKnown RBP21.55■■□□□ 1.04
UBE3D-201ENST00000237186 RCAN3Q9UKA8 241 aa21.54■■□□□ 1.04
UBE3D-201ENST00000237186 ADAMTS8Q9UP79 889 aa21.54■■□□□ 1.04
UBE3D-201ENST00000237186 ADGRB1O14514 1584 aa21.54■■□□□ 1.04
UBE3D-201ENST00000237186 CAMSAP1Q5T5Y3 1602 aa21.54■■□□□ 1.04
UBE3D-201ENST00000237186 PPLO60437 1756 aa21.53■■□□□ 1.04
UBE3D-201ENST00000237186 RRP1P56182 461 aaKnown RBP21.53■■□□□ 1.04
UBE3D-201ENST00000237186 PIK3C2BO00750 1634 aa21.53■■□□□ 1.04
UBE3D-201ENST00000237186 VGFO15240 615 aaPredicted RBP21.5■■□□□ 1.03
UBE3D-201ENST00000237186 MYT1Q01538 1121 aa21.5■■□□□ 1.03
UBE3D-201ENST00000237186 PUS7Q96PZ0 661 aaKnown RBP21.5■■□□□ 1.03
UBE3D-201ENST00000237186 CARD14Q9BXL6 1004 aa21.5■■□□□ 1.03
UBE3D-201ENST00000237186 SLC52A1Q9NWF4 448 aa21.5■■□□□ 1.03
UBE3D-201ENST00000237186 SALL2Q9Y467 1007 aaPredicted RBP21.5■■□□□ 1.03
UBE3D-201ENST00000237186 ZFYVE9O95405 1425 aa21.49■■□□□ 1.03
UBE3D-201ENST00000237186 WDR43Q15061 677 aaKnown RBP eCLIP21.49■■□□□ 1.03
UBE3D-201ENST00000237186 CDCA7LQ96GN5 454 aa21.49■■□□□ 1.03
UBE3D-201ENST00000237186 ZC3H13Q5T200 1668 aaKnown RBP21.49■■□□□ 1.03
UBE3D-201ENST00000237186 SIGLEC1Q9BZZ2 1709 aa21.48■■□□□ 1.03
UBE3D-201ENST00000237186 TRAK1Q9UPV9 953 aa21.47■■□□□ 1.03
UBE3D-201ENST00000237186 CCDC136Q96JN2 1154 aa21.46■■□□□ 1.03
UBE3D-201ENST00000237186 NEXMIFQ5QGS0 1516 aa21.46■■□□□ 1.03
UBE3D-201ENST00000237186 IDI1Q13907 227 aa21.45■■□□□ 1.02
UBE3D-201ENST00000237186 ZNF521Q96K83 1311 aa21.45■■□□□ 1.02
UBE3D-201ENST00000237186 FANCIQ9NVI1 1328 aa21.44■■□□□ 1.02
UBE3D-201ENST00000237186 TMEM132EQ6IEE7 984 aa21.43■■□□□ 1.02
UBE3D-201ENST00000237186 REREQ9P2R6 1566 aa21.41■■□□□ 1.02
UBE3D-201ENST00000237186 PLEKHH1Q9ULM0 1364 aa21.4■■□□□ 1.02
UBE3D-201ENST00000237186 PPP6R1Q9UPN7 881 aa21.4■■□□□ 1.02
UBE3D-201ENST00000237186 NGEFQ8N5V2 710 aa21.39■■□□□ 1.02
UBE3D-201ENST00000237186 CFAP65Q6ZU64 1925 aaKnown RBP21.39■■□□□ 1.01
UBE3D-201ENST00000237186 POLR3AO14802 1390 aaPredicted RBP21.39■■□□□ 1.01
UBE3D-201ENST00000237186 AGLP35573 1532 aa21.38■■□□□ 1.01
UBE3D-201ENST00000237186 QRICH2Q9H0J4 1663 aa21.37■■□□□ 1.01
UBE3D-201ENST00000237186 DUSP27Q5VZP5 1158 aa21.37■■□□□ 1.01
UBE3D-201ENST00000237186 SLC12A5Q9H2X9 1139 aa21.37■■□□□ 1.01
UBE3D-201ENST00000237186 GOLGA2Q08379 1002 aa21.36■■□□□ 1.01
UBE3D-201ENST00000237186 EXOC6Q8TAG9 804 aa21.36■■□□□ 1.01
UBE3D-201ENST00000237186 EVC2Q86UK5 1308 aa21.36■■□□□ 1.01
UBE3D-201ENST00000237186 NSD3Q9BZ95 1437 aa21.36■■□□□ 1.01
UBE3D-201ENST00000237186 TRMT2AQ8IZ69 625 aaKnown RBP21.35■■□□□ 1.01
UBE3D-201ENST00000237186 ARHGEF40Q8TER5 1519 aa21.35■■□□□ 1.01
UBE3D-201ENST00000237186 SLFN5Q08AF3 891 aa21.32■■□□□ 1
UBE3D-201ENST00000237186 TMEM131LA2VDJ0 1609 aa21.32■■□□□ 1
UBE3D-201ENST00000237186 PREX1Q8TCU6 1659 aa21.32■■□□□ 1
UBE3D-201ENST00000237186 USP32Q8NFA0 1604 aa21.31■■□□□ 1
UBE3D-201ENST00000237186 NUTM2DQ5VT03 806 aaPredicted RBP21.31■■□□□ 1
UBE3D-201ENST00000237186 ANP32EQ9BTT0 268 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms