RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 CHAF1AQ13111 956 aaPredicted RBP21.29■■□□□ 1
SLC1A4-201ENST00000234256 BRD4O60885 1362 aaPredicted RBP21.29■■□□□ 1
SLC1A4-201ENST00000234256 DDX19BQ9UMR2 479 aa21.29■■□□□ 1
SLC1A4-201ENST00000234256 ST18O60284 1047 aa21.28■■□□□ 1
SLC1A4-201ENST00000234256 PPP2R1AP30153 589 aa21.28■■□□□ 1
SLC1A4-201ENST00000234256 CCDC9Q9Y3X0 531 aaKnown RBP21.28■■□□□ 1
SLC1A4-201ENST00000234256 NRDCO43847 1150 aa21.27■■□□□ 1
SLC1A4-201ENST00000234256 KIAA2012Q0VF49 1180 aa21.26■□□□□ 0.99
SLC1A4-201ENST00000234256 SLC12A5Q9H2X9 1139 aa21.26■□□□□ 0.99
SLC1A4-201ENST00000234256 BCAR3O75815 825 aa21.25■□□□□ 0.99
SLC1A4-201ENST00000234256 NFKBIBQ15653 356 aa21.25■□□□□ 0.99
SLC1A4-201ENST00000234256 GOLGA6L6A8MZA4 724 aa21.24■□□□□ 0.99
SLC1A4-201ENST00000234256 EIF2S2P20042 333 aaKnown RBP21.24■□□□□ 0.99
SLC1A4-201ENST00000234256 GORABQ5T7V8 394 aa21.24■□□□□ 0.99
SLC1A4-201ENST00000234256 GNL2Q13823 731 aaKnown RBP21.23■□□□□ 0.99
SLC1A4-201ENST00000234256 HFM1A2PYH4 1435 aa21.23■□□□□ 0.99
SLC1A4-201ENST00000234256 PRG4Q92954 1404 aaPredicted RBP21.23■□□□□ 0.99
SLC1A4-201ENST00000234256 TOPBP1Q92547 1522 aa21.22■□□□□ 0.99
SLC1A4-201ENST00000234256 PTMSP20962 102 aa21.22■□□□□ 0.99
SLC1A4-201ENST00000234256 SYAP1Q96A49 352 aaPredicted RBP21.21■□□□□ 0.99
SLC1A4-201ENST00000234256 MIA2Q96PC5 1412 aa21.21■□□□□ 0.99
SLC1A4-201ENST00000234256 EFCAB5A4FU69 1503 aa21.21■□□□□ 0.99
SLC1A4-201ENST00000234256 NGEFQ8N5V2 710 aa21.2■□□□□ 0.98
SLC1A4-201ENST00000234256 SKAP1Q86WV1 359 aa21.19■□□□□ 0.98
SLC1A4-201ENST00000234256 DDX11L8A8MPP1 907 aa21.19■□□□□ 0.98
SLC1A4-201ENST00000234256 POLA1P09884 1462 aaPredicted RBP21.18■□□□□ 0.98
SLC1A4-201ENST00000234256 PRDM2Q13029 1718 aa21.18■□□□□ 0.98
SLC1A4-201ENST00000234256 HSP90B1P14625 803 aaKnown RBP21.18■□□□□ 0.98
SLC1A4-201ENST00000234256 AMER1Q5JTC6 1135 aaPredicted RBP21.17■□□□□ 0.98
SLC1A4-201ENST00000234256 C22orf23Q9BZE7 217 aa21.17■□□□□ 0.98
SLC1A4-201ENST00000234256 DNMBPQ6XZF7 1577 aa21.17■□□□□ 0.98
SLC1A4-201ENST00000234256 GPATCH3Q96I76 525 aa21.17■□□□□ 0.98
SLC1A4-201ENST00000234256 NAIPQ13075 1403 aa21.17■□□□□ 0.98
SLC1A4-201ENST00000234256 TEFQ10587 303 aa21.17■□□□□ 0.98
SLC1A4-201ENST00000234256 TSR2Q969E8 191 aaKnown RBP21.17■□□□□ 0.98
SLC1A4-201ENST00000234256 CHMP4AQ9BY43 222 aa21.17■□□□□ 0.98
SLC1A4-201ENST00000234256 FKBP5Q13451 457 aaPredicted RBP21.16■□□□□ 0.98
SLC1A4-201ENST00000234256 TAF7LQ5H9L4 462 aa21.16■□□□□ 0.98
SLC1A4-201ENST00000234256 EXOSC9Q06265 439 aaKnown RBP21.15■□□□□ 0.98
SLC1A4-201ENST00000234256 CHMP5Q9NZZ3 219 aa21.15■□□□□ 0.98
SLC1A4-201ENST00000234256 API5Q9BZZ5 524 aaKnown RBP21.15■□□□□ 0.98
SLC1A4-201ENST00000234256 ISY1Q9ULR0 285 aaKnown RBP21.15■□□□□ 0.98
SLC1A4-201ENST00000234256 KIAA1107Q9UPP5 1409 aa21.14■□□□□ 0.97
SLC1A4-201ENST00000234256 FRAT2O75474 233 aaPredicted RBP21.14■□□□□ 0.97
SLC1A4-201ENST00000234256 ANO2Q9NQ90 1003 aa21.13■□□□□ 0.97
SLC1A4-201ENST00000234256 TIAM1Q13009 1591 aa21.13■□□□□ 0.97
SLC1A4-201ENST00000234256 KIF16BQ96L93 1317 aa21.13■□□□□ 0.97
SLC1A4-201ENST00000234256 NUTM2GQ5VZR2 741 aa21.12■□□□□ 0.97
SLC1A4-201ENST00000234256 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
SLC1A4-201ENST00000234256 HDAC5Q9UQL6 1122 aa21.12■□□□□ 0.97
SLC1A4-201ENST00000234256 GRIN2BQ13224 1484 aa21.12■□□□□ 0.97
SLC1A4-201ENST00000234256 BACH2Q9BYV9 841 aa21.12■□□□□ 0.97
SLC1A4-201ENST00000234256 PDZRN3Q9UPQ7 1066 aa21.11■□□□□ 0.97
SLC1A4-201ENST00000234256 STAC3Q96MF2 364 aa21.11■□□□□ 0.97
SLC1A4-201ENST00000234256 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
SLC1A4-201ENST00000234256 C1orf115Q9H7X2 142 aa21.1■□□□□ 0.97
SLC1A4-201ENST00000234256 OSCARQ8IYS5 282 aa21.09■□□□□ 0.97
SLC1A4-201ENST00000234256 PRKAR2BP31323 418 aa21.09■□□□□ 0.97
SLC1A4-201ENST00000234256 GNAI1P63096 354 aa21.09■□□□□ 0.97
SLC1A4-201ENST00000234256 C9orf78Q9NZ63 289 aaPredicted RBP21.09■□□□□ 0.97
SLC1A4-201ENST00000234256 REC8O95072 547 aa21.09■□□□□ 0.97
SLC1A4-201ENST00000234256 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.97
SLC1A4-201ENST00000234256 C9orf84Q5VXU9 1444 aa21.08■□□□□ 0.97
SLC1A4-201ENST00000234256 MRC2Q9UBG0 1479 aa21.08■□□□□ 0.96
SLC1A4-201ENST00000234256 TOMM22Q9NS69 142 aa21.07■□□□□ 0.96
SLC1A4-201ENST00000234256 TSPYL4Q9UJ04 414 aa21.07■□□□□ 0.96
SLC1A4-201ENST00000234256 HTATSF1O43719 755 aaKnown RBP21.07■□□□□ 0.96
SLC1A4-201ENST00000234256 DIAPH3Q9NSV4 1193 aa21.06■□□□□ 0.96
SLC1A4-201ENST00000234256 BRPF3Q9ULD4 1205 aa21.05■□□□□ 0.96
SLC1A4-201ENST00000234256 FAM69CQ0P6D2 419 aa21.05■□□□□ 0.96
SLC1A4-201ENST00000234256 C1orf141Q5JVX7 400 aa21.04■□□□□ 0.96
SLC1A4-201ENST00000234256 PRAM1Q96QH2 718 aa21.04■□□□□ 0.96
SLC1A4-201ENST00000234256 MSH5O43196 834 aa21.04■□□□□ 0.96
SLC1A4-201ENST00000234256 TROQ12816 1431 aaPredicted RBP21.03■□□□□ 0.96
SLC1A4-201ENST00000234256 C20orf194Q5TEA3 1177 aa21.03■□□□□ 0.96
SLC1A4-201ENST00000234256 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
SLC1A4-201ENST00000234256 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.03■□□□□ 0.96
SLC1A4-201ENST00000234256 SF3A1Q15459 793 aaKnown RBP21.02■□□□□ 0.96
SLC1A4-201ENST00000234256 SKOR2Q2VWA4 1001 aaPredicted RBP21.02■□□□□ 0.96
SLC1A4-201ENST00000234256 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.96
SLC1A4-201ENST00000234256 PDE3AQ14432 1141 aa21.02■□□□□ 0.96
SLC1A4-201ENST00000234256 ARHGAP5Q13017 1502 aa21.02■□□□□ 0.96
SLC1A4-201ENST00000234256 IL27Q8NEV9 243 aa21.01■□□□□ 0.95
SLC1A4-201ENST00000234256 DAPK1P53355 1430 aa21.01■□□□□ 0.95
SLC1A4-201ENST00000234256 CDK13Q14004 1512 aaKnown RBP21.01■□□□□ 0.95
SLC1A4-201ENST00000234256 MCTP1Q6DN14 999 aa21■□□□□ 0.95
SLC1A4-201ENST00000234256 SMG6Q86US8 1419 aaKnown RBP21■□□□□ 0.95
SLC1A4-201ENST00000234256 SCAPERQ9BY12 1400 aa21■□□□□ 0.95
SLC1A4-201ENST00000234256 NOB1Q9ULX3 412 aaKnown RBP20.99■□□□□ 0.95
SLC1A4-201ENST00000234256 NLRP6P59044 892 aa20.99■□□□□ 0.95
SLC1A4-201ENST00000234256 CABP1Q9NZU7 370 aa20.99■□□□□ 0.95
SLC1A4-201ENST00000234256 H3BQV1 296 aa20.99■□□□□ 0.95
SLC1A4-201ENST00000234256 IFFO2Q5TF58 517 aa20.99■□□□□ 0.95
SLC1A4-201ENST00000234256 PHF14O94880 888 aa20.98■□□□□ 0.95
SLC1A4-201ENST00000234256 CREBRFQ8IUR6 639 aa20.98■□□□□ 0.95
SLC1A4-201ENST00000234256 MAP3K1Q13233 1512 aa20.98■□□□□ 0.95
SLC1A4-201ENST00000234256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.98■□□□□ 0.95
SLC1A4-201ENST00000234256 CSPP1Q1MSJ5 1256 aa20.98■□□□□ 0.95
SLC1A4-201ENST00000234256 INTS3Q68E01 1043 aaKnown RBP20.98■□□□□ 0.95
SLC1A4-201ENST00000234256 FAM184AQ8NB25 1140 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms