RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 MAGI2Q86UL8 1455 aa18.21■□□□□ 0.51
SCNN1A-201ENST00000228916 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
SCNN1A-201ENST00000228916 PPP2R1AP30153 589 aa18.2■□□□□ 0.5
SCNN1A-201ENST00000228916 ATP10AO60312 1499 aa18.19■□□□□ 0.5
SCNN1A-201ENST00000228916 WDR43Q15061 677 aaKnown RBP eCLIP18.18■□□□□ 0.5
SCNN1A-201ENST00000228916 FRAT2O75474 233 aaPredicted RBP18.18■□□□□ 0.5
SCNN1A-201ENST00000228916 SLFN5Q08AF3 891 aa18.18■□□□□ 0.5
SCNN1A-201ENST00000228916 TRMT2AQ8IZ69 625 aaKnown RBP18.18■□□□□ 0.5
SCNN1A-201ENST00000228916 EIF3AQ14152 1382 aaKnown RBP18.18■□□□□ 0.5
SCNN1A-201ENST00000228916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.18■□□□□ 0.5
SCNN1A-201ENST00000228916 PLXNC1O60486 1568 aa18.17■□□□□ 0.5
SCNN1A-201ENST00000228916 VIRMAQ69YN4 1812 aaKnown RBP18.17■□□□□ 0.5
SCNN1A-201ENST00000228916 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
SCNN1A-201ENST00000228916 PIK3C2GO75747 1445 aa18.15■□□□□ 0.5
SCNN1A-201ENST00000228916 RGS3P49796 1198 aa18.15■□□□□ 0.5
SCNN1A-201ENST00000228916 KNSTRNQ9Y448 316 aa18.15■□□□□ 0.5
SCNN1A-201ENST00000228916 SYNMO15061 1565 aa18.14■□□□□ 0.49
SCNN1A-201ENST00000228916 NKTRP30414 1462 aaKnown RBP18.12■□□□□ 0.49
SCNN1A-201ENST00000228916 IQGAP1P46940 1657 aa18.12■□□□□ 0.49
SCNN1A-201ENST00000228916 USP19O94966 1318 aa18.12■□□□□ 0.49
SCNN1A-201ENST00000228916 ABCC2Q92887 1545 aa18.12■□□□□ 0.49
SCNN1A-201ENST00000228916 DUOX2Q9NRD8 1548 aa18.12■□□□□ 0.49
SCNN1A-201ENST00000228916 ASXL1Q8IXJ9 1541 aa18.11■□□□□ 0.49
SCNN1A-201ENST00000228916 NPC1L1Q9UHC9 1359 aa18.11■□□□□ 0.49
SCNN1A-201ENST00000228916 FAM43AQ8N2R8 423 aa18.09■□□□□ 0.49
SCNN1A-201ENST00000228916 SPINK5Q9NQ38 1064 aaPredicted RBP18.08■□□□□ 0.49
SCNN1A-201ENST00000228916 MADDQ8WXG6 1647 aa18.08■□□□□ 0.48
SCNN1A-201ENST00000228916 CDCA8Q53HL2 280 aa18.07■□□□□ 0.48
SCNN1A-201ENST00000228916 IGHDP01880 384 aa18.06■□□□□ 0.48
SCNN1A-201ENST00000228916 MYOM1P52179 1685 aa18.06■□□□□ 0.48
SCNN1A-201ENST00000228916 BCAR3O75815 825 aa18.06■□□□□ 0.48
SCNN1A-201ENST00000228916 E9PSI1 815 aa18.05■□□□□ 0.48
SCNN1A-201ENST00000228916 CGNL1Q0VF96 1302 aa18.04■□□□□ 0.48
SCNN1A-201ENST00000228916 PDE3AQ14432 1141 aa18.04■□□□□ 0.48
SCNN1A-201ENST00000228916 MAPK8IP3Q9UPT6 1336 aa18.04■□□□□ 0.48
SCNN1A-201ENST00000228916 CCDC146Q8IYE0 955 aa18.04■□□□□ 0.48
SCNN1A-201ENST00000228916 NLRP1Q9C000 1473 aa18.04■□□□□ 0.48
SCNN1A-201ENST00000228916 NINLQ9Y2I6 1382 aa18.03■□□□□ 0.48
SCNN1A-201ENST00000228916 APAF1O14727 1248 aa18.03■□□□□ 0.48
SCNN1A-201ENST00000228916 SCAF11Q99590 1463 aaKnown RBP18.03■□□□□ 0.48
SCNN1A-201ENST00000228916 UBE2Q2Q8WVN8 375 aa18.03■□□□□ 0.48
SCNN1A-201ENST00000228916 NGEFQ8N5V2 710 aa18.03■□□□□ 0.48
SCNN1A-201ENST00000228916 CHD1O14646 1710 aa18.02■□□□□ 0.48
SCNN1A-201ENST00000228916 SCAPERQ9BY12 1400 aa18.02■□□□□ 0.48
SCNN1A-201ENST00000228916 ERCC6L2Q5T890 1561 aa18.02■□□□□ 0.48
SCNN1A-201ENST00000228916 RSPH6AQ9H0K4 717 aa18.02■□□□□ 0.47
SCNN1A-201ENST00000228916 SPHKAPQ2M3C7 1700 aa18.01■□□□□ 0.47
SCNN1A-201ENST00000228916 SEC24BO95487 1268 aa18.01■□□□□ 0.47
SCNN1A-201ENST00000228916 SHROOM2Q13796 1616 aa18.01■□□□□ 0.47
SCNN1A-201ENST00000228916 BECN1Q14457 450 aa18.01■□□□□ 0.47
SCNN1A-201ENST00000228916 POGKQ9P215 609 aa18■□□□□ 0.47
SCNN1A-201ENST00000228916 PLCH2O75038 1416 aa18■□□□□ 0.47
SCNN1A-201ENST00000228916 TRAPPC8Q9Y2L5 1435 aa18■□□□□ 0.47
SCNN1A-201ENST00000228916 CLUAP1Q96AJ1 413 aa18■□□□□ 0.47
SCNN1A-201ENST00000228916 CEP152O94986 1710 aa17.99■□□□□ 0.47
SCNN1A-201ENST00000228916 DMRT2Q9Y5R5 561 aa17.98■□□□□ 0.47
SCNN1A-201ENST00000228916 TRPM2O94759 1503 aa17.98■□□□□ 0.47
SCNN1A-201ENST00000228916 ABCC1P33527 1531 aa17.98■□□□□ 0.47
SCNN1A-201ENST00000228916 STAC3Q96MF2 364 aa17.98■□□□□ 0.47
SCNN1A-201ENST00000228916 ANTXR1Q9H6X2 564 aa17.98■□□□□ 0.47
SCNN1A-201ENST00000228916 ZMYM3Q14202 1370 aa17.97■□□□□ 0.47
SCNN1A-201ENST00000228916 CLTCL1P53675 1640 aa17.97■□□□□ 0.47
SCNN1A-201ENST00000228916 KDM5AP29375 1690 aaKnown RBP17.96■□□□□ 0.47
SCNN1A-201ENST00000228916 EIF5BO60841 1220 aaKnown RBP17.96■□□□□ 0.47
SCNN1A-201ENST00000228916 CENPJQ9HC77 1338 aaPredicted RBP17.96■□□□□ 0.47
SCNN1A-201ENST00000228916 EFCAB2Q5VUJ9 269 aa17.95■□□□□ 0.46
SCNN1A-201ENST00000228916 PTPRTO14522 1441 aa17.94■□□□□ 0.46
SCNN1A-201ENST00000228916 L1TD1Q5T7N2 865 aaKnown RBP17.94■□□□□ 0.46
SCNN1A-201ENST00000228916 PANK1Q8TE04 598 aa17.94■□□□□ 0.46
SCNN1A-201ENST00000228916 COG6Q9Y2V7 657 aa17.94■□□□□ 0.46
SCNN1A-201ENST00000228916 AAMPQ13685 434 aa17.93■□□□□ 0.46
SCNN1A-201ENST00000228916 SLKQ9H2G2 1235 aaPredicted RBP17.93■□□□□ 0.46
SCNN1A-201ENST00000228916 ZCCHC11Q5TAX3 1644 aaKnown RBP17.92■□□□□ 0.46
SCNN1A-201ENST00000228916 KIAA1210Q9ULL0 1709 aa17.92■□□□□ 0.46
SCNN1A-201ENST00000228916 AFAP1Q8N556 730 aa17.92■□□□□ 0.46
SCNN1A-201ENST00000228916 TBC1D32Q96NH3 1257 aa17.92■□□□□ 0.46
SCNN1A-201ENST00000228916 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
SCNN1A-201ENST00000228916 PMFBP1Q8TBY8 1022 aa17.91■□□□□ 0.46
SCNN1A-201ENST00000228916 SPAG9O60271 1321 aaKnown RBP17.9■□□□□ 0.46
SCNN1A-201ENST00000228916 POLR3AO14802 1390 aaPredicted RBP17.9■□□□□ 0.46
SCNN1A-201ENST00000228916 ZFYVE16Q7Z3T8 1539 aa17.9■□□□□ 0.46
SCNN1A-201ENST00000228916 DEPDC5O75140 1603 aa17.9■□□□□ 0.46
SCNN1A-201ENST00000228916 CANXP27824 592 aaKnown RBP17.89■□□□□ 0.46
SCNN1A-201ENST00000228916 RRAGDQ9NQL2 400 aaPredicted RBP17.89■□□□□ 0.45
SCNN1A-201ENST00000228916 ERVK-7P63135 1459 aa17.88■□□□□ 0.45
SCNN1A-201ENST00000228916 TBC1D2Q9BYX2 928 aa17.88■□□□□ 0.45
SCNN1A-201ENST00000228916 UPF2Q9HAU5 1272 aaKnown RBP17.88■□□□□ 0.45
SCNN1A-201ENST00000228916 CARD14Q9BXL6 1004 aa17.88■□□□□ 0.45
SCNN1A-201ENST00000228916 SLC24A1O60721 1099 aa17.87■□□□□ 0.45
SCNN1A-201ENST00000228916 RARSP54136 660 aaKnown RBP17.87■□□□□ 0.45
SCNN1A-201ENST00000228916 TET3O43151 1660 aa17.87■□□□□ 0.45
SCNN1A-201ENST00000228916 PCDHB15Q9Y5E8 787 aa17.87■□□□□ 0.45
SCNN1A-201ENST00000228916 RTEL1-TNFRSF6BF6WH68 1400 aa17.86■□□□□ 0.45
SCNN1A-201ENST00000228916 CFAP70Q5T0N1 1121 aa17.86■□□□□ 0.45
SCNN1A-201ENST00000228916 SHPRHQ149N8 1683 aa17.85■□□□□ 0.45
SCNN1A-201ENST00000228916 FSD2A1L4K1 749 aa17.85■□□□□ 0.45
SCNN1A-201ENST00000228916 PHF23Q9BUL5 403 aaPredicted RBP17.85■□□□□ 0.45
SCNN1A-201ENST00000228916 PDZRN3Q9UPQ7 1066 aa17.85■□□□□ 0.45
SCNN1A-201ENST00000228916 NEURL4Q96JN8 1562 aa17.85■□□□□ 0.45
SCNN1A-201ENST00000228916 UGGT1Q9NYU2 1555 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms