RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 PLEKHG1Q9ULL1 1385 aa42.23■■■■■ 4.35
PDCD2-201ENST00000167218 HDGFP51858 240 aaKnown RBP42.22■■■■■ 4.35
PDCD2-201ENST00000167218 ABCF1Q8NE71 845 aaKnown RBP eCLIP42.18■■■■■ 4.34
PDCD2-201ENST00000167218 ALKQ9UM73 1620 aa42.17■■■■■ 4.34
PDCD2-201ENST00000167218 TRPM2O94759 1503 aa42.16■■■■■ 4.34
PDCD2-201ENST00000167218 TOM1O60784 492 aa42.15■■■■■ 4.34
PDCD2-201ENST00000167218 PPP1R15AO75807 674 aaPredicted RBP42.15■■■■■ 4.34
PDCD2-201ENST00000167218 KCNA6P17658 529 aa42.15■■■■■ 4.34
PDCD2-201ENST00000167218 CLTCL1P53675 1640 aa42.14■■■■■ 4.34
PDCD2-201ENST00000167218 XIRP1Q702N8 1843 aaKnown RBP42.14■■■■■ 4.34
PDCD2-201ENST00000167218 NUTM2DQ5VT03 806 aaPredicted RBP42.13■■■■■ 4.33
PDCD2-201ENST00000167218 BCANQ96GW7 911 aa42.12■■■■■ 4.33
PDCD2-201ENST00000167218 SLC4A1APQ9BWU0 796 aaKnown RBP42.12■■■■■ 4.33
PDCD2-201ENST00000167218 SENP3Q9H4L4 574 aaPredicted RBP42.12■■■■■ 4.33
PDCD2-201ENST00000167218 NWD1Q149M9 1564 aa42.08■■■■■ 4.33
PDCD2-201ENST00000167218 ADAMTS13Q76LX8 1427 aa42.06■■■■■ 4.32
PDCD2-201ENST00000167218 TBX22Q9Y458 520 aa42.05■■■■■ 4.32
PDCD2-201ENST00000167218 PIP4K2BP78356 416 aa42.04■■■■■ 4.32
PDCD2-201ENST00000167218 CHD2O14647 1828 aaKnown RBP42.04■■■■■ 4.32
PDCD2-201ENST00000167218 KIF1BO60333 1816 aa42.01■■■■■ 4.32
PDCD2-201ENST00000167218 TMEM94Q12767 1356 aa42■■■■■ 4.31
PDCD2-201ENST00000167218 NKTRP30414 1462 aaKnown RBP41.99■■■■■ 4.31
PDCD2-201ENST00000167218 SCAF1Q9H7N4 1312 aaKnown RBP41.98■■■■■ 4.31
PDCD2-201ENST00000167218 ZNF326Q5BKZ1 582 aaKnown RBP41.97■■■■■ 4.31
PDCD2-201ENST00000167218 DIP2AQ14689 1571 aa41.97■■■■■ 4.31
PDCD2-201ENST00000167218 SETD5Q9C0A6 1442 aa41.95■■■■■ 4.31
PDCD2-201ENST00000167218 PROSER2Q86WR7 435 aaPredicted RBP41.95■■■■■ 4.31
PDCD2-201ENST00000167218 FOXD1Q16676 465 aa41.94■■■■■ 4.3
PDCD2-201ENST00000167218 NEXMIFQ5QGS0 1516 aa41.94■■■■■ 4.3
PDCD2-201ENST00000167218 MPHOSPH9Q99550 1183 aa41.93■■■■■ 4.3
PDCD2-201ENST00000167218 NRXN3Q9Y4C0 1643 aa41.92■■■■■ 4.3
PDCD2-201ENST00000167218 RBM33Q96EV2 1170 aaKnown RBP41.92■■■■■ 4.3
PDCD2-201ENST00000167218 PIK3R4Q99570 1358 aa41.89■■■■■ 4.3
PDCD2-201ENST00000167218 SETBP1Q9Y6X0 1596 aa41.89■■■■■ 4.3
PDCD2-201ENST00000167218 HSPA1LP34931 641 aa41.89■■■■■ 4.3
PDCD2-201ENST00000167218 ACIN1Q9UKV3 1341 aaKnown RBP41.85■■■■■ 4.29
PDCD2-201ENST00000167218 PTPRUQ92729 1446 aa41.82■■■■■ 4.29
PDCD2-201ENST00000167218 RAB3GAP2Q9H2M9 1393 aa41.81■■■■■ 4.28
PDCD2-201ENST00000167218 AMOTL2Q9Y2J4 779 aa41.75■■■■■ 4.27
PDCD2-201ENST00000167218 RPGRIP1LQ68CZ1 1315 aa41.74■■■■■ 4.27
PDCD2-201ENST00000167218 CCDC144AA2RUR9 1427 aa41.73■■■■■ 4.27
PDCD2-201ENST00000167218 NCOA3Q9Y6Q9 1424 aa41.73■■■■■ 4.27
PDCD2-201ENST00000167218 METP08581 1390 aa41.73■■■■■ 4.27
PDCD2-201ENST00000167218 PPLO60437 1756 aa41.71■■■■■ 4.27
PDCD2-201ENST00000167218 MSH6P52701 1360 aa41.71■■■■■ 4.27
PDCD2-201ENST00000167218 XRN1Q8IZH2 1706 aaKnown RBP41.7■■■■■ 4.27
PDCD2-201ENST00000167218 VGFO15240 615 aaPredicted RBP41.7■■■■■ 4.27
PDCD2-201ENST00000167218 FAM135BQ49AJ0 1406 aa41.69■■■■■ 4.27
PDCD2-201ENST00000167218 SPATA31E1Q6ZUB1 1445 aa41.68■■■■■ 4.26
PDCD2-201ENST00000167218 DISP3Q9P2K9 1392 aa41.65■■■■■ 4.26
PDCD2-201ENST00000167218 SETD1AO15047 1707 aaKnown RBP41.63■■■■■ 4.25
PDCD2-201ENST00000167218 HRCP23327 699 aa41.59■■■■■ 4.25
PDCD2-201ENST00000167218 ROBO1Q9Y6N7 1651 aa41.58■■■■■ 4.25
PDCD2-201ENST00000167218 SIPA1L2Q9P2F8 1722 aaPredicted RBP41.58■■■■■ 4.25
PDCD2-201ENST00000167218 RGL3Q3MIN7 710 aa41.57■■■■■ 4.25
PDCD2-201ENST00000167218 C19orf44Q9H6X5 657 aa41.57■■■■■ 4.25
PDCD2-201ENST00000167218 SLAIN2Q9P270 581 aa41.57■■■■■ 4.25
PDCD2-201ENST00000167218 IFT172Q9UG01 1749 aa41.55■■■■■ 4.24
PDCD2-201ENST00000167218 C14orf37Q86TY3 774 aa41.55■■■■■ 4.24
PDCD2-201ENST00000167218 ADGRF5Q8IZF2 1346 aa41.52■■■■■ 4.24
PDCD2-201ENST00000167218 ANKRD30BQ9BXX2 1392 aa41.49■■■■■ 4.23
PDCD2-201ENST00000167218 CADPS2Q86UW7 1296 aa41.47■■■■■ 4.23
PDCD2-201ENST00000167218 MED1Q15648 1581 aaPredicted RBP41.46■■■■■ 4.23
PDCD2-201ENST00000167218 ATF3P18847 181 aa41.44■■■■■ 4.22
PDCD2-201ENST00000167218 DCCP43146 1447 aa41.43■■■■■ 4.22
PDCD2-201ENST00000167218 PRAG1Q86YV5 1406 aa41.43■■■■■ 4.22
PDCD2-201ENST00000167218 PTCH1Q13635 1447 aa41.41■■■■■ 4.22
PDCD2-201ENST00000167218 ILDR2Q71H61 639 aa41.39■■■■■ 4.22
PDCD2-201ENST00000167218 ROBO2Q9HCK4 1378 aa41.38■■■■■ 4.22
PDCD2-201ENST00000167218 ADGRL3Q9HAR2 1447 aa41.37■■■■■ 4.21
PDCD2-201ENST00000167218 PIK3C2GO75747 1445 aa41.36■■■■■ 4.21
PDCD2-201ENST00000167218 NALCNQ8IZF0 1738 aa41.35■■■■■ 4.21
PDCD2-201ENST00000167218 PHLPP1O60346 1717 aa41.32■■■■■ 4.2
PDCD2-201ENST00000167218 NRXN1Q9ULB1 1477 aa41.3■■■■■ 4.2
PDCD2-201ENST00000167218 MST1RQ04912 1400 aa41.3■■■■■ 4.2
PDCD2-201ENST00000167218 ASXL1Q8IXJ9 1541 aa41.29■■■■■ 4.2
PDCD2-201ENST00000167218 MYOM2P54296 1465 aa41.28■■■■■ 4.2
PDCD2-201ENST00000167218 BRINP3Q76B58 766 aa41.26■■■■■ 4.2
PDCD2-201ENST00000167218 COL16A1Q07092 1604 aaPredicted RBP41.24■■■■■ 4.19
PDCD2-201ENST00000167218 AHDC1Q5TGY3 1603 aaPredicted RBP41.23■■■■■ 4.19
PDCD2-201ENST00000167218 TECPR2O15040 1411 aa41.22■■■■■ 4.19
PDCD2-201ENST00000167218 TMEM132EQ6IEE7 984 aa41.22■■■■■ 4.19
PDCD2-201ENST00000167218 C14orf93Q9H972 538 aaKnown RBP41.22■■■■■ 4.19
PDCD2-201ENST00000167218 LRPPRCP42704 1394 aaKnown RBP41.22■■■■■ 4.19
PDCD2-201ENST00000167218 ABCC11Q96J66 1382 aa41.19■■■■■ 4.18
PDCD2-201ENST00000167218 STK26Q9P289 416 aa41.17■■■■■ 4.18
PDCD2-201ENST00000167218 KNDC1Q76NI1 1749 aa41.17■■■■■ 4.18
PDCD2-201ENST00000167218 CFAP70Q5T0N1 1121 aa41.15■■■■■ 4.18
PDCD2-201ENST00000167218 YTHDC2Q9H6S0 1430 aaKnown RBP41.14■■■■■ 4.18
PDCD2-201ENST00000167218 JCADQ9P266 1359 aa41.13■■■■■ 4.18
PDCD2-201ENST00000167218 LAMC1P11047 1609 aa41.13■■■■■ 4.17
PDCD2-201ENST00000167218 C1orf167Q5SNV9 1468 aa41.12■■■■■ 4.17
PDCD2-201ENST00000167218 WAPLQ7Z5K2 1190 aa41.11■■■■■ 4.17
PDCD2-201ENST00000167218 NHSL1Q5SYE7 1610 aa41.09■■■■■ 4.17
PDCD2-201ENST00000167218 PHF23Q9BUL5 403 aaPredicted RBP41.09■■■■■ 4.17
PDCD2-201ENST00000167218 DHX57Q6P158 1386 aaKnown RBP41.07■■■■■ 4.16
PDCD2-201ENST00000167218 PLEKHH1Q9ULM0 1364 aa41.07■■■■■ 4.16
PDCD2-201ENST00000167218 DCAF11Q8TEB1 546 aa41.06■■■■■ 4.16
PDCD2-201ENST00000167218 CDC42BPGQ6DT37 1551 aa41.04■■■■■ 4.16
PDCD2-201ENST00000167218 SIRT1Q96EB6 747 aa41.04■■■■■ 4.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms