RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 MYO5CQ9NQX4 1742 aa10.86□□□□□ -0.67
CDC27-201ENST00000066544 RRP7AQ9Y3A4 280 aaKnown RBP10.86□□□□□ -0.67
CDC27-201ENST00000066544 TMEM132EQ6IEE7 984 aa10.85□□□□□ -0.67
CDC27-201ENST00000066544 WDR7Q9Y4E6 1490 aa10.85□□□□□ -0.67
CDC27-201ENST00000066544 KANK1Q14678 1352 aa10.85□□□□□ -0.67
CDC27-201ENST00000066544 BCAR3O75815 825 aa10.85□□□□□ -0.67
CDC27-201ENST00000066544 DMRT2Q9Y5R5 561 aa10.85□□□□□ -0.67
CDC27-201ENST00000066544 SAFB2Q14151 953 aaKnown RBP eCLIP10.85□□□□□ -0.67
CDC27-201ENST00000066544 IQGAP3Q86VI3 1631 aa10.85□□□□□ -0.67
CDC27-201ENST00000066544 MAST1Q9Y2H9 1570 aa10.84□□□□□ -0.67
CDC27-201ENST00000066544 BLMP54132 1417 aaPredicted RBP10.84□□□□□ -0.67
CDC27-201ENST00000066544 ATP10AO60312 1499 aa10.84□□□□□ -0.67
CDC27-201ENST00000066544 CARD14Q9BXL6 1004 aa10.84□□□□□ -0.67
CDC27-201ENST00000066544 UGGT1Q9NYU2 1555 aa10.83□□□□□ -0.68
CDC27-201ENST00000066544 CANXP27824 592 aaKnown RBP10.83□□□□□ -0.68
CDC27-201ENST00000066544 SLC12A5Q9H2X9 1139 aa10.83□□□□□ -0.68
CDC27-201ENST00000066544 SCAF11Q99590 1463 aaKnown RBP10.82□□□□□ -0.68
CDC27-201ENST00000066544 NEFMP07197 916 aa10.82□□□□□ -0.68
CDC27-201ENST00000066544 FRAT1Q92837 279 aaPredicted RBP10.82□□□□□ -0.68
CDC27-201ENST00000066544 PLXNC1O60486 1568 aa10.82□□□□□ -0.68
CDC27-201ENST00000066544 EIF2AK4Q9P2K8 1649 aaKnown RBP10.81□□□□□ -0.68
CDC27-201ENST00000066544 SLFN5Q08AF3 891 aa10.81□□□□□ -0.68
CDC27-201ENST00000066544 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.81□□□□□ -0.68
CDC27-201ENST00000066544 ABCC1P33527 1531 aa10.81□□□□□ -0.68
CDC27-201ENST00000066544 MS4A1P11836 297 aa10.81□□□□□ -0.68
CDC27-201ENST00000066544 BCL2L13Q9BXK5 485 aa10.81□□□□□ -0.68
CDC27-201ENST00000066544 ZCCHC11Q5TAX3 1644 aaKnown RBP10.81□□□□□ -0.68
CDC27-201ENST00000066544 MORC1Q86VD1 984 aa10.8□□□□□ -0.68
CDC27-201ENST00000066544 EIF3AQ14152 1382 aaKnown RBP10.8□□□□□ -0.68
CDC27-201ENST00000066544 FANCAO15360 1455 aa10.8□□□□□ -0.68
CDC27-201ENST00000066544 DAXXQ9UER7 740 aaPredicted RBP10.8□□□□□ -0.68
CDC27-201ENST00000066544 ZMYM4Q5VZL5 1548 aa10.8□□□□□ -0.68
CDC27-201ENST00000066544 CFAP65Q6ZU64 1925 aaKnown RBP10.79□□□□□ -0.68
CDC27-201ENST00000066544 PANK1Q8TE04 598 aa10.79□□□□□ -0.68
CDC27-201ENST00000066544 COG6Q9Y2V7 657 aa10.79□□□□□ -0.68
CDC27-201ENST00000066544 ADGRL1O94910 1474 aa10.78□□□□□ -0.68
CDC27-201ENST00000066544 ASXL1Q8IXJ9 1541 aa10.78□□□□□ -0.68
CDC27-201ENST00000066544 CENPJQ9HC77 1338 aaPredicted RBP10.78□□□□□ -0.68
CDC27-201ENST00000066544 ZNF521Q96K83 1311 aa10.78□□□□□ -0.68
CDC27-201ENST00000066544 CLTCL1P53675 1640 aa10.78□□□□□ -0.68
CDC27-201ENST00000066544 NPM1P06748 294 aaKnown RBP eCLIP10.77□□□□□ -0.68
CDC27-201ENST00000066544 CENPQQ7L2Z9 268 aaPredicted RBP10.77□□□□□ -0.68
CDC27-201ENST00000066544 STK26Q9P289 416 aa10.77□□□□□ -0.68
CDC27-201ENST00000066544 SHROOM2Q13796 1616 aa10.77□□□□□ -0.69
CDC27-201ENST00000066544 MADDQ8WXG6 1647 aa10.77□□□□□ -0.69
CDC27-201ENST00000066544 CLUAP1Q96AJ1 413 aa10.77□□□□□ -0.69
CDC27-201ENST00000066544 NOS1P29475 1434 aa10.76□□□□□ -0.69
CDC27-201ENST00000066544 ZFYVE16Q7Z3T8 1539 aa10.76□□□□□ -0.69
CDC27-201ENST00000066544 PTPRTO14522 1441 aa10.75□□□□□ -0.69
CDC27-201ENST00000066544 TNNQ9UQP3 1299 aa10.75□□□□□ -0.69
CDC27-201ENST00000066544 TRPM2O94759 1503 aa10.75□□□□□ -0.69
CDC27-201ENST00000066544 KDM2BQ8NHM5 1336 aa10.75□□□□□ -0.69
CDC27-201ENST00000066544 E9PSI1 815 aa10.75□□□□□ -0.69
CDC27-201ENST00000066544 MTHFSP49914 203 aa10.75□□□□□ -0.69
CDC27-201ENST00000066544 ATP7AQ04656 1500 aa10.74□□□□□ -0.69
CDC27-201ENST00000066544 RAPGEF3O95398 923 aa10.74□□□□□ -0.69
CDC27-201ENST00000066544 LAMC1P11047 1609 aa10.74□□□□□ -0.69
CDC27-201ENST00000066544 IGHDP01880 384 aa10.74□□□□□ -0.69
CDC27-201ENST00000066544 TCP11L2Q8N4U5 519 aa10.74□□□□□ -0.69
CDC27-201ENST00000066544 STAC3Q96MF2 364 aa10.74□□□□□ -0.69
CDC27-201ENST00000066544 RTEL1-TNFRSF6BF6WH68 1400 aa10.74□□□□□ -0.69
CDC27-201ENST00000066544 NSD3Q9BZ95 1437 aa10.74□□□□□ -0.69
CDC27-201ENST00000066544 WWC1Q8IX03 1113 aa10.74□□□□□ -0.69
CDC27-201ENST00000066544 ERVK-7P63135 1459 aa10.74□□□□□ -0.69
CDC27-201ENST00000066544 PIK3C2GO75747 1445 aa10.73□□□□□ -0.69
CDC27-201ENST00000066544 FAM161AQ3B820 660 aa10.73□□□□□ -0.69
CDC27-201ENST00000066544 CABP2Q9NPB3 220 aa10.73□□□□□ -0.69
CDC27-201ENST00000066544 RTN4Q9NQC3 1192 aaKnown RBP10.73□□□□□ -0.69
CDC27-201ENST00000066544 U2AF1L5P0DN76 240 aaPredicted RBP10.73□□□□□ -0.69
CDC27-201ENST00000066544 U2AF1Q01081 240 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDC27-201ENST00000066544 RNF17Q9BXT8 1623 aaKnown RBP10.73□□□□□ -0.69
CDC27-201ENST00000066544 U2SURPO15042 1029 aaKnown RBP10.72□□□□□ -0.69
CDC27-201ENST00000066544 ASXL2Q76L83 1435 aa10.72□□□□□ -0.69
CDC27-201ENST00000066544 C8orf34Q49A92 452 aa10.72□□□□□ -0.69
CDC27-201ENST00000066544 DDRGK1Q96HY6 314 aa10.72□□□□□ -0.69
CDC27-201ENST00000066544 SPHKAPQ2M3C7 1700 aa10.71□□□□□ -0.69
CDC27-201ENST00000066544 INSRP06213 1382 aa10.71□□□□□ -0.69
CDC27-201ENST00000066544 IQGAP1P46940 1657 aa10.71□□□□□ -0.69
CDC27-201ENST00000066544 UHRF1BP1LA0JNW5 1464 aa10.71□□□□□ -0.7
CDC27-201ENST00000066544 NKTRP30414 1462 aaKnown RBP10.71□□□□□ -0.7
CDC27-201ENST00000066544 SRPK2P78362 688 aaKnown RBP10.7□□□□□ -0.7
CDC27-201ENST00000066544 TRMT2AQ8IZ69 625 aaKnown RBP10.7□□□□□ -0.7
CDC27-201ENST00000066544 SYNMO15061 1565 aa10.7□□□□□ -0.7
CDC27-201ENST00000066544 PPM1GO15355 546 aaPredicted RBP10.7□□□□□ -0.7
CDC27-201ENST00000066544 GGNBP2Q9H3C7 697 aa10.7□□□□□ -0.7
CDC27-201ENST00000066544 RLBP1P12271 317 aa10.69□□□□□ -0.7
CDC27-201ENST00000066544 RUNDC1Q96C34 613 aa10.69□□□□□ -0.7
CDC27-201ENST00000066544 CFAP53Q96M91 514 aa10.69□□□□□ -0.7
CDC27-201ENST00000066544 TSR2Q969E8 191 aaKnown RBP10.68□□□□□ -0.7
CDC27-201ENST00000066544 C14orf93Q9H972 538 aaKnown RBP10.68□□□□□ -0.7
CDC27-201ENST00000066544 CLASP1Q7Z460 1538 aa10.68□□□□□ -0.7
CDC27-201ENST00000066544 SLC24A1O60721 1099 aa10.68□□□□□ -0.7
CDC27-201ENST00000066544 MINK1Q8N4C8 1332 aaPredicted RBP10.68□□□□□ -0.7
CDC27-201ENST00000066544 NPC1L1Q9UHC9 1359 aa10.68□□□□□ -0.7
CDC27-201ENST00000066544 IL27Q8NEV9 243 aa10.68□□□□□ -0.7
CDC27-201ENST00000066544 TET3O43151 1660 aa10.68□□□□□ -0.7
CDC27-201ENST00000066544 NFKBIBQ15653 356 aa10.68□□□□□ -0.7
CDC27-201ENST00000066544 SEC24BO95487 1268 aa10.67□□□□□ -0.7
CDC27-201ENST00000066544 ABCA6Q8N139 1617 aa10.67□□□□□ -0.7
CDC27-201ENST00000066544 CGNL1Q0VF96 1302 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms