RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 CSPP1Q1MSJ5 1256 aa5.41□□□□□ -1.54
CFTR-201ENST00000003084 CD44P16070 742 aaKnown RBP5.41□□□□□ -1.54
CFTR-201ENST00000003084 L3MBTL2Q969R5 705 aa5.41□□□□□ -1.54
CFTR-201ENST00000003084 CCDC9Q9Y3X0 531 aaKnown RBP5.41□□□□□ -1.54
CFTR-201ENST00000003084 GOLGA6L22H0YM25 854 aa5.41□□□□□ -1.54
CFTR-201ENST00000003084 CDK11BP21127 795 aaKnown RBP5.41□□□□□ -1.54
CFTR-201ENST00000003084 MIA2Q96PC5 1412 aa5.41□□□□□ -1.54
CFTR-201ENST00000003084 HOMEZQ8IX15 550 aa5.41□□□□□ -1.54
CFTR-201ENST00000003084 FRAT1Q92837 279 aaPredicted RBP5.41□□□□□ -1.54
CFTR-201ENST00000003084 DHX57Q6P158 1386 aaKnown RBP5.41□□□□□ -1.54
CFTR-201ENST00000003084 AMPHP49418 695 aa5.41□□□□□ -1.54
CFTR-201ENST00000003084 CGNL1Q0VF96 1302 aa5.4□□□□□ -1.54
CFTR-201ENST00000003084 RRBP1Q9P2E9 1410 aaKnown RBP5.4□□□□□ -1.54
CFTR-201ENST00000003084 U2AF1L5P0DN76 240 aaPredicted RBP5.4□□□□□ -1.54
CFTR-201ENST00000003084 U2AF1Q01081 240 aaKnown RBP eCLIP5.4□□□□□ -1.54
CFTR-201ENST00000003084 PRXQ9BXM0 1461 aa5.4□□□□□ -1.54
CFTR-201ENST00000003084 IQGAP2Q13576 1575 aa5.4□□□□□ -1.54
CFTR-201ENST00000003084 FAM177BA6PVY3 158 aa5.4□□□□□ -1.55
CFTR-201ENST00000003084 PPP4R2Q9NY27 417 aa5.4□□□□□ -1.55
CFTR-201ENST00000003084 COG3Q96JB2 828 aa5.4□□□□□ -1.55
CFTR-201ENST00000003084 TROQ12816 1431 aaPredicted RBP5.4□□□□□ -1.55
CFTR-201ENST00000003084 MCCP23508 829 aa5.39□□□□□ -1.55
CFTR-201ENST00000003084 ANKRD50Q9ULJ7 1429 aa5.39□□□□□ -1.55
CFTR-201ENST00000003084 RIOK3O14730 519 aaKnown RBP5.39□□□□□ -1.55
CFTR-201ENST00000003084 STK31Q9BXU1 1019 aa5.39□□□□□ -1.55
CFTR-201ENST00000003084 TRAK1Q9UPV9 953 aa5.39□□□□□ -1.55
CFTR-201ENST00000003084 SUPT6HQ7KZ85 1726 aaKnown RBP5.39□□□□□ -1.55
CFTR-201ENST00000003084 RDH13Q8NBN7 331 aa5.39□□□□□ -1.55
CFTR-201ENST00000003084 TMEM106CQ9BVX2 250 aa5.39□□□□□ -1.55
CFTR-201ENST00000003084 APPP05067 770 aa5.38□□□□□ -1.55
CFTR-201ENST00000003084 EVA1CP58658 441 aa5.38□□□□□ -1.55
CFTR-201ENST00000003084 IRX6P78412 446 aaPredicted RBP5.38□□□□□ -1.55
CFTR-201ENST00000003084 ZRSR1Q15695 479 aaKnown RBP5.38□□□□□ -1.55
CFTR-201ENST00000003084 HFM1A2PYH4 1435 aa5.38□□□□□ -1.55
CFTR-201ENST00000003084 MEX3CQ5U5Q3 659 aaKnown RBP5.37□□□□□ -1.55
CFTR-201ENST00000003084 GRIN2AQ12879 1464 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 ATF3P18847 181 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 RAB15P59190 212 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 PDE3BQ13370 1112 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 ERICH6BQ5W0A0 696 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 PODXL2Q9NZ53 605 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 MYBBP1AQ9BQG0 1328 aaKnown RBP5.37□□□□□ -1.55
CFTR-201ENST00000003084 UNC13AQ9UPW8 1703 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 NLRP13Q86W25 1043 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 VTI1AQ96AJ9 217 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 LARP6Q9BRS8 491 aaKnown RBP5.37□□□□□ -1.55
CFTR-201ENST00000003084 PCDHB8Q9UN66 801 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 PSEN1P49768 467 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 C1orf141Q5JVX7 400 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 GPATCH3Q96I76 525 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 SUPT16HQ9Y5B9 1047 aaKnown RBP5.37□□□□□ -1.55
CFTR-201ENST00000003084 C9orf84Q5VXU9 1444 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 ARAP1Q96P48 1450 aa5.37□□□□□ -1.55
CFTR-201ENST00000003084 KCNJ4P48050 445 aa5.36□□□□□ -1.55
CFTR-201ENST00000003084 PLCB2Q00722 1185 aa5.36□□□□□ -1.55
CFTR-201ENST00000003084 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.36□□□□□ -1.55
CFTR-201ENST00000003084 KIF14Q15058 1648 aa5.36□□□□□ -1.55
CFTR-201ENST00000003084 BIVM-ERCC5R4GMW8 1640 aa5.36□□□□□ -1.55
CFTR-201ENST00000003084 NLRP6P59044 892 aa5.36□□□□□ -1.55
CFTR-201ENST00000003084 RWDD1Q9H446 243 aaPredicted RBP5.36□□□□□ -1.55
CFTR-201ENST00000003084 SCAPERQ9BY12 1400 aa5.36□□□□□ -1.55
CFTR-201ENST00000003084 USP47Q96K76 1375 aa5.36□□□□□ -1.55
CFTR-201ENST00000003084 THEMISQ8N1K5 641 aaPredicted RBP5.36□□□□□ -1.55
CFTR-201ENST00000003084 RPGRIP1LQ68CZ1 1315 aa5.36□□□□□ -1.55
CFTR-201ENST00000003084 MAP3K7O43318 606 aa5.36□□□□□ -1.55
CFTR-201ENST00000003084 HMMRO75330 724 aa5.36□□□□□ -1.55
CFTR-201ENST00000003084 NUTM1Q86Y26 1132 aa5.36□□□□□ -1.55
CFTR-201ENST00000003084 NGEFQ8N5V2 710 aa5.36□□□□□ -1.55
CFTR-201ENST00000003084 PMFBP1Q8TBY8 1022 aa5.36□□□□□ -1.55
CFTR-201ENST00000003084 FGD1P98174 961 aa5.35□□□□□ -1.55
CFTR-201ENST00000003084 PDAP1Q13442 181 aaKnown RBP5.35□□□□□ -1.55
CFTR-201ENST00000003084 NEUROD4Q9HD90 331 aa5.35□□□□□ -1.55
CFTR-201ENST00000003084 TIAM1Q13009 1591 aa5.35□□□□□ -1.55
CFTR-201ENST00000003084 CENPJQ9HC77 1338 aaPredicted RBP5.35□□□□□ -1.55
CFTR-201ENST00000003084 PNMA1Q8ND90 353 aa5.35□□□□□ -1.55
CFTR-201ENST00000003084 BBXQ8WY36 941 aaPredicted RBP5.35□□□□□ -1.55
CFTR-201ENST00000003084 PANK3Q9H999 370 aa5.35□□□□□ -1.55
CFTR-201ENST00000003084 URB2Q14146 1524 aaKnown RBP5.34□□□□□ -1.55
CFTR-201ENST00000003084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.34□□□□□ -1.55
CFTR-201ENST00000003084 MINK1Q8N4C8 1332 aaPredicted RBP5.34□□□□□ -1.55
CFTR-201ENST00000003084 AKT1S1Q96B36 256 aa5.34□□□□□ -1.55
CFTR-201ENST00000003084 EPRSP07814 1512 aaKnown RBP5.34□□□□□ -1.55
CFTR-201ENST00000003084 ST20-MTHFSA0A0A6YYL1 179 aa5.34□□□□□ -1.56
CFTR-201ENST00000003084 TAF7LQ5H9L4 462 aa5.34□□□□□ -1.56
CFTR-201ENST00000003084 SCUBE2Q9NQ36 999 aa5.34□□□□□ -1.56
CFTR-201ENST00000003084 SLC52A1Q9NWF4 448 aa5.34□□□□□ -1.56
CFTR-201ENST00000003084 GPRASP1Q5JY77 1395 aa5.34□□□□□ -1.56
CFTR-201ENST00000003084 ZNF644Q9H582 1327 aaPredicted RBP5.34□□□□□ -1.56
CFTR-201ENST00000003084 ITPRIPQ8IWB1 547 aa5.34□□□□□ -1.56
CFTR-201ENST00000003084 KIAA1211Q6ZU35 1233 aa5.33□□□□□ -1.56
CFTR-201ENST00000003084 CCDC97Q96F63 343 aaPredicted RBP5.33□□□□□ -1.56
CFTR-201ENST00000003084 DAPK1P53355 1430 aa5.33□□□□□ -1.56
CFTR-201ENST00000003084 HSP90AB1P08238 724 aaKnown RBP5.33□□□□□ -1.56
CFTR-201ENST00000003084 RCAN3Q9UKA8 241 aa5.33□□□□□ -1.56
CFTR-201ENST00000003084 CD109Q6YHK3 1445 aa5.33□□□□□ -1.56
CFTR-201ENST00000003084 ROCK1Q13464 1354 aa5.33□□□□□ -1.56
CFTR-201ENST00000003084 GOLGA6L6A8MZA4 724 aa5.33□□□□□ -1.56
CFTR-201ENST00000003084 TTC5Q8N0Z6 440 aa5.33□□□□□ -1.56
CFTR-201ENST00000003084 CCDC141Q6ZP82 1450 aa5.33□□□□□ -1.56
CFTR-201ENST00000003084 LTV1Q96GA3 475 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms