RNA–Protein interactions for RNA: ENSMUST00000200043.4

Pdlim5-212, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-212ENSMUST00000200043 Prrc2bQ7TPM1 1486 aaKnown RBP22.69■■□□□ 1.22
Pdlim5-212ENSMUST00000200043 Ppip5k1A2ARP1 1436 aa22.69■■□□□ 1.22
Pdlim5-212ENSMUST00000200043 AatkQ80YE4 1365 aa22.68■■□□□ 1.22
Pdlim5-212ENSMUST00000200043 Myom1Q62234 1667 aaKnown RBP22.68■■□□□ 1.22
Pdlim5-212ENSMUST00000200043 Gemin5Q8BX17 1502 aaKnown RBP22.67■■□□□ 1.22
Pdlim5-212ENSMUST00000200043 Myo3aQ8K3H5 1613 aa22.66■■□□□ 1.22
Pdlim5-212ENSMUST00000200043 Rprd2Q6NXI6 1469 aaKnown RBP22.65■■□□□ 1.22
Pdlim5-212ENSMUST00000200043 Arid4bA2CG63 1314 aaKnown RBP22.64■■□□□ 1.22
Pdlim5-212ENSMUST00000200043 Pip4k2bQ80XI4 416 aa22.64■■□□□ 1.22
Pdlim5-212ENSMUST00000200043 Usp47Q8BY87 1376 aa22.64■■□□□ 1.21
Pdlim5-212ENSMUST00000200043 Txndc2Q6P902 515 aa22.63■■□□□ 1.21
Pdlim5-212ENSMUST00000200043 Iqgap1Q9JKF1 1657 aaKnown RBP22.62■■□□□ 1.21
Pdlim5-212ENSMUST00000200043 Plxnc1Q9QZC2 1574 aa22.62■■□□□ 1.21
Pdlim5-212ENSMUST00000200043 Washc2Q6PGL7 1334 aa22.61■■□□□ 1.21
Pdlim5-212ENSMUST00000200043 Setd1aE9PYH6 1716 aa22.61■■□□□ 1.21
Pdlim5-212ENSMUST00000200043 Hspa5P20029 655 aaKnown RBP22.6■■□□□ 1.21
Pdlim5-212ENSMUST00000200043 P3h3Q8CG70 732 aa22.6■■□□□ 1.21
Pdlim5-212ENSMUST00000200043 Hdac5Q9Z2V6 1113 aa22.6■■□□□ 1.21
Pdlim5-212ENSMUST00000200043 Rock1P70335 1354 aa22.59■■□□□ 1.21
Pdlim5-212ENSMUST00000200043 Arhgef28P97433 1693 aa22.58■■□□□ 1.2
Pdlim5-212ENSMUST00000200043 Tulp4Q9JIL5 1547 aa22.57■■□□□ 1.2
Pdlim5-212ENSMUST00000200043 Mroh3A0A1D5RM54 893 aa22.55■■□□□ 1.2
Pdlim5-212ENSMUST00000200043 Tubgcp6G5E8P0 1769 aa22.54■■□□□ 1.2
Pdlim5-212ENSMUST00000200043 AU022751B1B0V2 589 aa22.54■■□□□ 1.2
Pdlim5-212ENSMUST00000200043 Psme1P97371 249 aa22.54■■□□□ 1.2
Pdlim5-212ENSMUST00000200043 Rgl3Q3UYI5 709 aa22.54■■□□□ 1.2
Pdlim5-212ENSMUST00000200043 Adamts13Q769J6 1426 aa22.53■■□□□ 1.2
Pdlim5-212ENSMUST00000200043 Nrxn3Q6P9K9 1571 aa22.53■■□□□ 1.2
Pdlim5-212ENSMUST00000200043 Gm13695A2AK44 830 aa22.53■■□□□ 1.2
Pdlim5-212ENSMUST00000200043 Med1Q925J9 1575 aa22.52■■□□□ 1.2
Pdlim5-212ENSMUST00000200043 IghaA0A0A6YXW6 389 aa22.5■■□□□ 1.19
Pdlim5-212ENSMUST00000200043 Rims1Q99NE5 1463 aa22.5■■□□□ 1.19
Pdlim5-212ENSMUST00000200043 Slit3Q9WVB4 1523 aa22.5■■□□□ 1.19
Pdlim5-212ENSMUST00000200043 Lmtk3Q5XJV6 1424 aa22.49■■□□□ 1.19
Pdlim5-212ENSMUST00000200043 Gli3Q61602 1583 aa22.48■■□□□ 1.19
Pdlim5-212ENSMUST00000200043 Asxl2Q8BZ32 1370 aa22.48■■□□□ 1.19
Pdlim5-212ENSMUST00000200043 Cep152A2AUM9 1736 aaKnown RBP22.48■■□□□ 1.19
Pdlim5-212ENSMUST00000200043 PalldQ9ET54 1408 aa22.48■■□□□ 1.19
Pdlim5-212ENSMUST00000200043 Thsd7aQ69ZU6 1645 aa22.47■■□□□ 1.19
Pdlim5-212ENSMUST00000200043 Atp1b4Q99ME6 356 aa22.45■■□□□ 1.18
Pdlim5-212ENSMUST00000200043 Cdk5rap2Q8K389 1822 aa22.45■■□□□ 1.18
Pdlim5-212ENSMUST00000200043 Rapgef3Q8VCC8 918 aa22.44■■□□□ 1.18
Pdlim5-212ENSMUST00000200043 MaddQ80U28 1577 aa22.42■■□□□ 1.18
Pdlim5-212ENSMUST00000200043 Cdk13Q69ZA1 1511 aaKnown RBP22.41■■□□□ 1.18
Pdlim5-212ENSMUST00000200043 Ifit1bl1D3Z6F0 470 aa22.4■■□□□ 1.18
Pdlim5-212ENSMUST00000200043 Shq1Q7TMX5 569 aa22.4■■□□□ 1.18
Pdlim5-212ENSMUST00000200043 PzpQ61838 1495 aa22.39■■□□□ 1.18
Pdlim5-212ENSMUST00000200043 Q9D9H8 365 aa22.39■■□□□ 1.18
Pdlim5-212ENSMUST00000200043 Acin1Q9JIX8 1338 aaKnown RBP22.37■■□□□ 1.17
Pdlim5-212ENSMUST00000200043 Grwd1Q810D6 446 aaKnown RBP22.37■■□□□ 1.17
Pdlim5-212ENSMUST00000200043 Sipa1l1Q8C0T5 1782 aa22.35■■□□□ 1.17
Pdlim5-212ENSMUST00000200043 Arap3Q8R5G7 1538 aa22.33■■□□□ 1.17
Pdlim5-212ENSMUST00000200043 Neurod1Q60867 357 aa22.33■■□□□ 1.17
Pdlim5-212ENSMUST00000200043 Ift172Q6VH22 1749 aa22.33■■□□□ 1.17
Pdlim5-212ENSMUST00000200043 Kdm2aP59997 1161 aa22.33■■□□□ 1.16
Pdlim5-212ENSMUST00000200043 Mbd5B1AYB6 1498 aa22.31■■□□□ 1.16
Pdlim5-212ENSMUST00000200043 Os9Q8K2C7 672 aa22.29■■□□□ 1.16
Pdlim5-212ENSMUST00000200043 Mug2P28666 1451 aa22.29■■□□□ 1.16
Pdlim5-212ENSMUST00000200043 Lrrc7Q80TE7 1490 aa22.28■■□□□ 1.16
Pdlim5-212ENSMUST00000200043 Srpk2O54781 681 aaKnown RBP22.28■■□□□ 1.16
Pdlim5-212ENSMUST00000200043 Fan1Q69ZT1 1020 aa22.28■■□□□ 1.16
Pdlim5-212ENSMUST00000200043 Polr3aB2RXC6 1390 aa22.27■■□□□ 1.16
Pdlim5-212ENSMUST00000200043 Pik3r4Q8VD65 1358 aa22.27■■□□□ 1.16
Pdlim5-212ENSMUST00000200043 Col18a1P39061 1774 aa22.27■■□□□ 1.16
Pdlim5-212ENSMUST00000200043 NefmP08553 848 aa22.27■■□□□ 1.16
Pdlim5-212ENSMUST00000200043 Slc52a2Q9D8F3 450 aa22.27■■□□□ 1.16
Pdlim5-212ENSMUST00000200043 Cps1Q8C196 1500 aa22.27■■□□□ 1.16
Pdlim5-212ENSMUST00000200043 Cpsf1Q9EPU4 1441 aaKnown RBP22.25■■□□□ 1.15
Pdlim5-212ENSMUST00000200043 Tns3Q5SSZ5 1440 aa22.24■■□□□ 1.15
Pdlim5-212ENSMUST00000200043 Cep170bQ80U49 1574 aa22.23■■□□□ 1.15
Pdlim5-212ENSMUST00000200043 TonslQ6NZL6 1363 aa22.23■■□□□ 1.15
Pdlim5-212ENSMUST00000200043 Unc13bQ9Z1N9 1602 aa22.22■■□□□ 1.15
Pdlim5-212ENSMUST00000200043 Gm20521D3Z5F7 333 aa22.22■■□□□ 1.15
Pdlim5-212ENSMUST00000200043 Puf60Q3UEB3 564 aaKnown RBP22.22■■□□□ 1.15
Pdlim5-212ENSMUST00000200043 Kif20bQ80WE4 1774 aaKnown RBP22.22■■□□□ 1.15
Pdlim5-212ENSMUST00000200043 Stk26Q99JT2 416 aa22.21■■□□□ 1.15
Pdlim5-212ENSMUST00000200043 HnrnpmQ9D0E1 729 aaKnown RBP22.2■■□□□ 1.14
Pdlim5-212ENSMUST00000200043 Col14a1Q80X19 1797 aa22.18■■□□□ 1.14
Pdlim5-212ENSMUST00000200043 NalcnQ8BXR5 1738 aa22.17■■□□□ 1.14
Pdlim5-212ENSMUST00000200043 Itsn2Q9Z0R6 1659 aa22.17■■□□□ 1.14
Pdlim5-212ENSMUST00000200043 Usp32F8VPZ3 1604 aa22.17■■□□□ 1.14
Pdlim5-212ENSMUST00000200043 Utp14aQ640M1 767 aaKnown RBP22.16■■□□□ 1.14
Pdlim5-212ENSMUST00000200043 DnmbpQ6TXD4 1580 aa22.16■■□□□ 1.14
Pdlim5-212ENSMUST00000200043 Rreb1Q3UH06 1700 aaKnown RBP22.16■■□□□ 1.14
Pdlim5-212ENSMUST00000200043 Abca14E9Q8F8 1683 aa22.15■■□□□ 1.14
Pdlim5-212ENSMUST00000200043 Amigo3Q8C2S7 508 aa22.15■■□□□ 1.14
Pdlim5-212ENSMUST00000200043 RalgapbQ8BQZ4 1484 aa22.14■■□□□ 1.13
Pdlim5-212ENSMUST00000200043 D430041D05RikF6ZGR6 1678 aa22.14■■□□□ 1.13
Pdlim5-212ENSMUST00000200043 Ppargc1bQ8VHJ7 1014 aa22.13■■□□□ 1.13
Pdlim5-212ENSMUST00000200043 Nwd1A6H603 1563 aa22.12■■□□□ 1.13
Pdlim5-212ENSMUST00000200043 Tmem94Q7TSH8 1360 aa22.11■■□□□ 1.13
Pdlim5-212ENSMUST00000200043 Dapk1Q80YE7 1442 aa22.11■■□□□ 1.13
Pdlim5-212ENSMUST00000200043 Plekhg1F6S200 1446 aa22.1■■□□□ 1.13
Pdlim5-212ENSMUST00000200043 Usp40Q8BWR4 1235 aa22.09■■□□□ 1.13
Pdlim5-212ENSMUST00000200043 C3P01027 1663 aa22.09■■□□□ 1.13
Pdlim5-212ENSMUST00000200043 Nphp4P59240 1425 aa22.08■■□□□ 1.12
Pdlim5-212ENSMUST00000200043 Evi5lH3BKQ3 813 aa22.08■■□□□ 1.12
Pdlim5-212ENSMUST00000200043 Slain2Q8CI08 581 aa22.08■■□□□ 1.12
Pdlim5-212ENSMUST00000200043 Pik3c2bE9QAN8 1632 aa22.07■■□□□ 1.12
Pdlim5-212ENSMUST00000200043 Hspa1lP16627 641 aa22.06■■□□□ 1.12
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms