RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Srcin1Q9QWI6 1250 aa18.09■□□□□ 0.49
Pdlim5-208ENSMUST00000196220 Dip2cE9PWR4 1557 aa18.08■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Col17a1Q07563 1470 aa18.07■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Ptch1Q61115 1434 aa18.07■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Talpid3E9PV87 1520 aa18.07■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 AatkQ80YE4 1365 aa18.07■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Slc24a1Q91WD8 1130 aa18.06■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Ehbp1l1Q99MS7 1716 aa18.06■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 PrxO55103 1391 aa18.06■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Ino80Q6ZPV2 1559 aa18.06■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 CenpbP27790 599 aa18.06■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Itsn2Q9Z0R6 1659 aa18.05■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Tmf1B9EKI3 1091 aa18.05■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Sall3Q62255 1320 aa18.04■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Adamts7Q68SA9 1657 aa18.04■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Nphp4P59240 1425 aa18.04■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Uggt1Q6P5E4 1551 aa18.03■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 AdgbG3UZ78 1657 aa18.02■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Gm20521D3Z5F7 333 aa18.02■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Pank3Q8R2W9 370 aa18.02■□□□□ 0.48
Pdlim5-208ENSMUST00000196220 Synj2Q9D2G5 1434 aa18.01■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Calr4Q3TQS0 420 aa18.01■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 DnmbpQ6TXD4 1580 aa18.01■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Srpk2O54781 681 aaKnown RBP18■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Zscan10Q3URR7 782 aa18■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Rsph4aQ8BYM7 716 aa18■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Stk24Q99KH8 431 aa18■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Myo3aQ8K3H5 1613 aa18■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Gm16486A0A1D5RMD1 1434 aa17.99■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Plxnc1Q9QZC2 1574 aa17.99■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Kdm2aP59997 1161 aa17.99■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Zscan21Q07231 555 aa17.98■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Gtf2e1Q9D0D5 440 aa17.98■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Prdm2A2A7B5 1709 aaKnown RBP17.97■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Tex14Q7M6U3 1450 aa17.97■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Ttc37F8VPK0 1563 aa17.97■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Cdk5rap2Q8K389 1822 aa17.96■□□□□ 0.47
Pdlim5-208ENSMUST00000196220 Fam184bQ0KK56 942 aa17.95■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Inpp5dQ9ES52 1191 aa17.95■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Rpgrip1lQ8CG73 1264 aa17.94■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Os9Q8K2C7 672 aa17.94■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Hecw2Q6I6G8 1578 aa17.94■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Mroh1E0CZ22 1640 aa17.94■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Ofd1Q80Z25 1017 aa17.93■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Usp40Q8BWR4 1235 aa17.93■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Slc52a2Q9D8F3 450 aa17.93■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Sipa1l1Q8C0T5 1782 aa17.93■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Cul9Q80TT8 1865 aa17.92■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Knl1Q66JQ7 1612 aa17.92■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Ttbk1Q6PCN3 1308 aa17.91■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Yeats2Q3TUF7 1407 aa17.9■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Slc4a1apE9PX68 744 aa17.9■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Fan1Q69ZT1 1020 aa17.9■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Atf7ipQ7TT18 1306 aa17.89■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Puf60Q3UEB3 564 aaKnown RBP17.89■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Mak16Q8BGS0 296 aaKnown RBP17.89■□□□□ 0.46
Pdlim5-208ENSMUST00000196220 Zbtb4Q5F293 982 aa17.89■□□□□ 0.45
Pdlim5-208ENSMUST00000196220 Skint5A7XUY5 1461 aa17.88■□□□□ 0.45
Pdlim5-208ENSMUST00000196220 PalldQ9ET54 1408 aa17.88■□□□□ 0.45
Pdlim5-208ENSMUST00000196220 Rab3gap2Q8BMG7 1366 aa17.87■□□□□ 0.45
Pdlim5-208ENSMUST00000196220 Gprasp1Q5U4C1 1347 aa17.87■□□□□ 0.45
Pdlim5-208ENSMUST00000196220 Kdm5aQ3UXZ9 1690 aa17.87■□□□□ 0.45
Pdlim5-208ENSMUST00000196220 SafbD3YXK2 937 aaKnown RBP17.86■□□□□ 0.45
Pdlim5-208ENSMUST00000196220 MaddQ80U28 1577 aa17.85■□□□□ 0.45
Pdlim5-208ENSMUST00000196220 Upf2A2AT37 1269 aaKnown RBP17.85■□□□□ 0.45
Pdlim5-208ENSMUST00000196220 AU022751B1B0V2 589 aa17.85■□□□□ 0.45
Pdlim5-208ENSMUST00000196220 Hfm1D3Z4R1 1434 aa17.84■□□□□ 0.45
Pdlim5-208ENSMUST00000196220 InsrP15208 1372 aa17.84■□□□□ 0.45
Pdlim5-208ENSMUST00000196220 Anp32aO35381 247 aa17.83■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 Eif5bQ05D44 1216 aaKnown RBP17.83■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 Ppp2r1aQ76MZ3 589 aa17.83■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 Kank1E9Q238 1360 aa17.83■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 KdrP35918 1367 aa17.83■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 Ift172Q6VH22 1749 aa17.83■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 Lrrc7Q80TE7 1490 aa17.83■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 Myom1Q62234 1667 aaKnown RBP17.82■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 Ppp1r18Q8BQ30 594 aa17.82■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 Ahdc1Q6PAL7 1594 aaKnown RBP17.82■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 Eif2ak4Q9QZ05 1648 aa17.82■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 Q7TT23 1179 aa17.81■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 IqubQ8CDK3 788 aa17.8■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 Cfap65Q3V0B4 1847 aa17.78■□□□□ 0.44
Pdlim5-208ENSMUST00000196220 CenpjQ569L8 1344 aa17.77■□□□□ 0.43
Pdlim5-208ENSMUST00000196220 NpatQ8BMA5 1420 aa17.76■□□□□ 0.43
Pdlim5-208ENSMUST00000196220 Prrc2bQ7TPM1 1486 aaKnown RBP17.76■□□□□ 0.43
Pdlim5-208ENSMUST00000196220 Zfp444Q3TDV8 331 aaKnown RBP17.76■□□□□ 0.43
Pdlim5-208ENSMUST00000196220 Ttc41Q692V3 1318 aa17.76■□□□□ 0.43
Pdlim5-208ENSMUST00000196220 Arhgap23Q69ZH9 1483 aa17.76■□□□□ 0.43
Pdlim5-208ENSMUST00000196220 Gm38655A0A286YDK6 273 aa17.75■□□□□ 0.43
Pdlim5-208ENSMUST00000196220 Stag3O70576 1240 aa17.75■□□□□ 0.43
Pdlim5-208ENSMUST00000196220 Kif7B7ZNG0 1348 aa17.75■□□□□ 0.43
Pdlim5-208ENSMUST00000196220 L3mbtl2P59178 703 aa17.74■□□□□ 0.43
Pdlim5-208ENSMUST00000196220 Mink1Q9JM52 1308 aa17.74■□□□□ 0.43
Pdlim5-208ENSMUST00000196220 Qser1A2BIE1 1698 aa17.73■□□□□ 0.43
Pdlim5-208ENSMUST00000196220 PtprmP28828 1452 aa17.72■□□□□ 0.43
Pdlim5-208ENSMUST00000196220 Wdr43Q6ZQL4 677 aaKnown RBP17.69■□□□□ 0.42
Pdlim5-208ENSMUST00000196220 Dcaf11Q91VU6 549 aa17.69■□□□□ 0.42
Pdlim5-208ENSMUST00000196220 Plekhg1F6S200 1446 aa17.69■□□□□ 0.42
Pdlim5-208ENSMUST00000196220 P3h3Q8CG70 732 aa17.69■□□□□ 0.42
Pdlim5-208ENSMUST00000196220 Naip7Q9JIB3 1402 aa17.67■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 487.7 ms