RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 NgefQ8CHT1 710 aa12.19□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Cetn4Q8K4K1 168 aa12.19□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Gm21969J3QJZ1 289 aa12.19□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Ddx11Q6AXC6 880 aa12.19□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Podxl2Q8CAE9 603 aa12.18□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Aebp1Q640N1 1128 aa12.18□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Fez1Q8K0X8 392 aa12.18□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Cep112Q5PR68 954 aa12.18□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Tomm22Q9CPQ3 142 aa12.18□□□□□ -0.46
Col6a5-203ENSMUST00000190193 PhaxQ9JJT9 385 aaKnown RBP12.18□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Def6Q8C2K1 630 aa12.18□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Rab11fip3Q8CHD8 1047 aa12.18□□□□□ -0.46
Col6a5-203ENSMUST00000190193 CenpjQ569L8 1344 aa12.17□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Sycp2Q9CUU3 1500 aa12.17□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Trim55G3X8Y1 545 aa12.17□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Drc7Q6V3W6 876 aa12.17□□□□□ -0.46
Col6a5-203ENSMUST00000190193 CftrP26361 1476 aa12.17□□□□□ -0.46
Col6a5-203ENSMUST00000190193 TchhA0A0B4J1F9 1599 aa12.17□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Ccdc183A2AJB1 534 aa12.17□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Bicd2Q921C5 820 aa12.17□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Pds5bQ4VA53 1446 aaKnown RBP12.16□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Ncoa2Q61026 1462 aa12.16□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Tiam1Q60610 1591 aa12.16□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Ccdc146E9Q9F7 977 aa12.16□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Nop14Q8R3N1 860 aaKnown RBP12.15□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Rec8Q8C5S7 591 aa12.15□□□□□ -0.46
Col6a5-203ENSMUST00000190193 HmmrQ00547 794 aaKnown RBP12.15□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Znf710Q3U288 666 aa12.15□□□□□ -0.46
Col6a5-203ENSMUST00000190193 IbspQ61711 324 aa12.15□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Dhx29Q6PGC1 1365 aaKnown RBP12.15□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Cplx2P84086 134 aa12.15□□□□□ -0.46
Col6a5-203ENSMUST00000190193 Efcab5A0JP43 1406 aa12.15□□□□□ -0.46
Col6a5-203ENSMUST00000190193 1700010I14RikQ7TPG0 532 aa12.14□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Top2bQ64511 1612 aa12.14□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Carmil1Q6EDY6 1374 aa12.13□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Smc3Q9CW03 1217 aaKnown RBP12.13□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Noc3lQ8VI84 807 aaKnown RBP12.13□□□□□ -0.47
Col6a5-203ENSMUST00000190193 AnlnQ8K298 1121 aaKnown RBP12.13□□□□□ -0.47
Col6a5-203ENSMUST00000190193 OptnQ8K3K8 584 aa12.13□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Ccdc60Q8C4J0 545 aa12.13□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Tceal9Q9DD24 104 aa12.12□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Cplx1P63040 134 aa12.12□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Ncapd3Q6ZQK0 1506 aa12.12□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Tsen2Q6P7W5 460 aa12.12□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Slc4a1apE9PX68 744 aa12.11□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Pank3Q8R2W9 370 aa12.11□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Mcm2P97310 904 aa12.11□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Chmp3Q9CQ10 224 aa12.11□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Ttll13A4Q9F6 804 aa12.11□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Fam184aE9PW83 1143 aa12.1□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Ccdc171E9Q1U1 1324 aa12.1□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Ppp2r3aB2RXC8 1150 aa12.1□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Kri1Q8VDQ9 704 aaKnown RBP12.1□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Hoxa7P02830 229 aa12.1□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Erc2Q6PH08 957 aa12.09□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Mical1Q8VDP3 1048 aa12.09□□□□□ -0.47
Col6a5-203ENSMUST00000190193 SkilQ60665 675 aa12.09□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Krt82Q99M74 516 aa12.09□□□□□ -0.47
Col6a5-203ENSMUST00000190193 GsdmaQ9EST1 446 aa12.09□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Cabp1Q9JLK7 227 aa12.09□□□□□ -0.47
Col6a5-203ENSMUST00000190193 NcapgE9PWG6 1004 aa12.09□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Psma5Q9Z2U1 241 aaKnown RBP12.09□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Birc3O08863 600 aa12.09□□□□□ -0.47
Col6a5-203ENSMUST00000190193 Slc4a10Q5DTL9 1118 aa12.08□□□□□ -0.48
Col6a5-203ENSMUST00000190193 G3bp1P97855 465 aaKnown RBP12.08□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Pdcl2Q78Y63 240 aa12.08□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Spag5Q7TME2 1165 aa12.08□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Zkscan1Q8BGS3 561 aaKnown RBP12.08□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Jakmip2D3YXK0 820 aa12.08□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Fam193aQ8CGI1 1231 aaKnown RBP12.08□□□□□ -0.48
Col6a5-203ENSMUST00000190193 KarsQ99MN1 595 aaKnown RBP12.08□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Necab1Q8BG18 352 aa12.08□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Arid4aF8VPQ2 1261 aaKnown RBP12.08□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Plin1Q8CGN5 517 aa12.08□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Med4Q9CQA5 270 aa12.08□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Wdr78E9PYY5 807 aa12.07□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Ints3Q7TPD0 1041 aaKnown RBP12.07□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Odf2A3KGV1 830 aaKnown RBP12.07□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Sycp1Q62209 993 aa12.07□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Phldb2Q8K1N2 1249 aa12.07□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Arhgef5E9Q7D5 1581 aa12.06□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Iqgap2Q3UQ44 1575 aa12.06□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Phactr2B1AVP0 632 aa12.06□□□□□ -0.48
Col6a5-203ENSMUST00000190193 ScaperF8VQ70 1398 aaKnown RBP12.06□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Map3k1P53349 1493 aa12.06□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Rbm10Q99KG3 930 aaKnown RBP12.06□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Ccdc83Q9D4V3 305 aa12.06□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Rsph4aQ8BYM7 716 aa12.06□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Washc2Q6PGL7 1334 aa12.06□□□□□ -0.48
Col6a5-203ENSMUST00000190193 WrnO09053 1401 aa12.05□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Polr3gQ6NXY9 223 aa12.05□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Tnnt1O88346 262 aa12.05□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Otud6bQ8K2H2 294 aa12.05□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Stk31Q99MW1 1018 aa12.05□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Rab3gap2Q8BMG7 1366 aa12.05□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Ccdc30Q8BVF4 654 aa12.05□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Stk26Q99JT2 416 aa12.04□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Paxip1Q6NZQ4 1056 aa12.04□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Tmco3Q8BH01 678 aa12.04□□□□□ -0.48
Col6a5-203ENSMUST00000190193 Fam184bQ0KK56 942 aa12.04□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms